Mp5g09710



Description

Annotation

Database ID Description
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR36066 TRANSCRIPTION FACTOR BHLH145
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
Gene3D G3DSA:4.10.280.10 HLH
CDD cd18917 bHLH_AtSAC51_like
SMART SM00353 finulus
GO GO:0046983 protein dimerization activity
MapolyID Mapoly0048s0099 -

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH42 transcription factor, bHLH Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, bHLH (from nomenclature)

0 core 1 peripheral

Furumoto, T., et al. (2024) · Plant & Cell Physiology  research experimental comparator
Sole M. polymorpha homolog of Arabidopsis SAC51, examined as a potential thermospermine-responsive target. Its 5' leader showed no response to thermospermine in a reporter assay, indicating molecular mechanisms distinct from vascular plants.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g09710.1 chr5:10719378..10721529 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.