Mp5g13130



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR31083 UPSTREAM OF FLC PROTEIN (DUF966)
Pfam PF06136 Domain of unknown function (DUF966)
MapolyID Mapoly0032s0007 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSOK MpSOSEKI protein Published

Associated Literature (AI-based literature mining, Beta-version)

Marchantia's single SOSEKI protein; MpSOK-Citrine was expressed and showed clear polar localization in gemmae coordinated among cells, resolving into polar puncta at high resolution similar to Arabidopsis SOK1. Demonstrates that DIX-domain-driven polar localization is retained in a species with only one SOSEKI gene.

1 core 0 peripheral

van Dop, M., et al. (2020) · Cell  research experimental subject
Marchantia's single SOSEKI protein; MpSOK-Citrine was expressed and showed clear polar localization in gemmae coordinated among cells, resolving into polar puncta at high resolution similar to Arabidopsis SOK1. Demonstrates that DIX-domain-driven polar localization is retained in a species with only one SOSEKI gene.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g13130.1 chr5:14363544..14369594 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13130.2 chr5:14363544..14369594 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.