Mp5g13160



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF46689 Homeodomain-like
SUPERFAMILY SSF47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
SMART SM00389 HOX_1
PANTHER PTHR33400 ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED
CDD cd00086 homeodomain
Gene3D G3DSA:1.10.10.60 -
PANTHER PTHR33400:SF6 HOMEOBOX PROTEIN LUMINIDEPENDENS
GO GO:0003677 DNA binding
MapolyID Mapoly0032s0010 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHD10 transcription factor, HD, homeodomain protein Published
MpLD transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g13160.1 chr5:14395769..14411658 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13160.2 chr5:14390445..14411658 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13160.3 chr5:14390507..14411658 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.