| Database | ID | Description |
|---|---|---|
| KOG | KOG1812 | Predicted E3 ubiquitin ligase; [O] |
| KOG | KOG1677 | CCCH-type Zn-finger protein; N-term missing; C-term missing; [R] |
| SUPERFAMILY | SSF90229 | CCCH zinc finger |
| Gene3D | G3DSA:1.20.120.1750 | - |
| SMART | SM00356 | c3hfinal6 |
| ProSiteProfiles | PS51873 | TRIAD supradomain profile. |
| Pfam | PF01485 | IBR domain, a half RING-finger domain |
| SMART | SM00184 | ring_2 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. |
| SUPERFAMILY | SSF57850 | RING/U-box |
| SMART | SM00647 | ibrneu5 |
| PANTHER | PTHR11685 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like |
| Gene3D | G3DSA:3.30.420.10 | - |
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) |
| Gene3D | G3DSA:4.10.1000.10 | CCCH zinc finger |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. |
| PANTHER | PTHR11685:SF223 | RBR-TYPE E3 UBIQUITIN TRANSFERASE |
| Pfam | PF13456 | Reverse transcriptase-like |
| Pfam | PF00642 | Zinc finger C-x8-C-x5-C-x3-H type (and similar) |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain |
| ProSiteProfiles | PS50103 | Zinc finger C3H1-type profile. |
| Coils | Coil | Coil |
| GO | GO:0046872 | metal ion binding |
| GO | GO:0003676 | nucleic acid binding |
| GO | GO:0004842 | ubiquitin-protein transferase activity |
| GO | GO:0004523 | RNA-DNA hybrid ribonuclease activity |
| GO | GO:0016567 | protein ubiquitination |
| MapolyID | Mapoly0010s0070 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpC3H21 | transcription factor, C3H | Provisional |
Caution: MBEX data are analyzed based on the v7.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g23860.1 gactttcgga cactgaatag ttttgagcga tgacatgatt gcttcattcg tacacacgag agctgtaggg ctgtcggaat gaaacctgcg agcgttaggc gacggggctt atgattggat tttgtccgct gggattcttt gcggggcgtt aatattccat ttgattgtag gaggaatttt tctcagagag tttgactgat tccgaatatt ccggtctgtg ggttgggtcg accagcccgg gcagtgaagt ggttcttgat ttgggcgaga gtagaattga agaggcagct gttgatgtgg gagtgcgtgg atttagagga atggcgagag gctcgttgct ggtggcagat tagctgagga tggggattga tggaactttg ttctggaaat tcgacactga tgccgcttga cttttccagc cccaccgtat tttattcaca tggtttgacg aggtacttct gaccagcttc tccacagaag ctgacgtgtt cgtttgttcg ttttttcaag gcggtatcaa tgtgcgggga gcagcatcga gtggtttctc gcgcgggcga atgttttctt aggcggacga ttgttcagag tactagagag tcatgtgagc tgcagagaaa tcgtcagtag cgtattttta gtgtgtactt ctatcgtaga tgttctctga cccatctgaa gctcaagagg aggattgagg tccgcggttc agtggcgatc ggtgccttcc gacttttttc gttcttgaaa gcggaggaaa gggaaggcag aggggaagtc ttgccttgat ttgcaatgtt cttctttctt gtttcgtaaa tcggatttga ggagtcagtc gaaggcttga atctgcgcgt gtggagctct gggggaaatt gacaggggca tttgtctgag aagggaaaga tggcagatgt agtagcagca cgtcagcaac tgctggaggt aaataaggcg acggtgatgt attcggactg ggagctggct tacgatttgc agttggagga ggcaatggct gcatcggcta tggatgtccc tcctgtcaaa tcacaaattc gtgagggtaa acgtcccgtg gaggagagct ttgtacaaga gacgttgccg aagaactcat tagataaaac tactctcgat gtaagggatc gcttttccgc attggggttt cagagtgcgg aattgcagat acttgaggaa atccttggag atcagaaaaa ggcggctaaa gaggcgcagg atttgataca agagtttcgg atgaggagtc acgataggca attcgcaaag tcagtggatg agatgcccga tacggaatgg gaggaagaag gggatatcta tgaggagcca ttccacggac ttgacgatga ctattgggat gaaaatcagg tctgtaagtt gtatactggc agggcgaggg aagaaccagg gcatgtggca atggcttggt ctttgaggga tgccgaaggc catgtgctgg tcgaatcagg caaatatctg gggatgggaa ccgcagccta tgtcgccgag tatacagcac ttattgaagg cctttcttac gctgtggcag ctggtgtgaa gaacatacaa gcacgtacgt tctctcaccc ggtgtttaat caggtgagag tcttgtatgt ggtttgtttt ctgtggagtt cttgactcag tttgtcatca ttttacagag taggtgaaaa acaacggtgt ttttcacacc aatttcacat gaaaccagac attctctgga tttatgtgaa gttggtgtga aaacgttcaa ggagtacatc tgtgtgttgc ttctgaactt ggcaggatgt aattgtgtgt tttacaaatg gtcattgcaa gactttcttg cgtcggactg gatcctcatt actgcccgct tagttctccc actattgtta ctgcgacagg tgctctcctc ctttacatta cactgatctt ctccttttag gcttctcaca ctcatgcctc agatcatcca tgacgctttc cacttttact attatcgtct tctcagtgct tttcatccag tatatgatac tggagaagag atatactgta tatctcttcg gctccttcga gatttagaac taattttttg ttgcttctgt cccttgcatg ctaagccctg acggcggatc atctactatc ttatgtgttc tgtcaaactc cgaagaaatg aaacctacaa ggaaagcttg cggaaaataa tctttcttcc tttgttgctt ttgaacttgg tagaatgttg atgtgcttaa catgccaagt cccgacgaaa gaaaagtcca gttcctatac attcaatcaa tcttcttgtg tttgtcttga acttggtgga aaaaaaatat gtgttttttt tttccactaa tgaaaatggg aatccaaaac acctgggaga acatatcttc ttgactgtca ctcgcagtat gagagtactg aacaggagtt ccgcactctg cttgaagagg gagcttttct tagtattgaa gagaccaagg atcctgtaga agtttgcatt tgagtattcg aaaccaactc tcacggattt gagcggagat attacttgga aaccatccaa gcagcatatt tgtcaaagcc caagtatttg acagatctca ggcagataca atgcgagtta gccgttcctg ggactttcga agtgtatttg gcattgcgcc gtctgactct aataattatg atgaccccag tataatcttc tccaatattc acatgattat ctttagagtt tacttgactt ctatgagaac acgcctgtat tctaacctta atttccatgg atcaccgctc ggacacgggg tggggtgtat tggtctccag cttatgtcat cggaatcatt gtcagaaatt ttttaatatc attcagtatt ttgtcctggg acaaggattg tagattgtcg cagatgagga gttcaaaata ctcattgctc ttgtttgttg gtttgacata atcaggtttc tggtctatgg aaagcccgtg ctccaaaaca tataaagttg ttggaagaag tgtttgaaca tacgaagcag ttgaaggttt tcaacataag gctgacgtcc agacgcactg ttgagaatct agcacatgat gctattcgga agcacgttac acaggggccg aaggatatca agaggctaaa gccctcgtca tccggattcg ttactactcc agaggaaacg gatatgatag attgtcccgt atgccttgag aatgttcgag aagctgacac cttcgtggtc caagagtgcc ttcatcggtt ttgtgtgagt tgcttgaccc aacatgttca gattcgcgtc aagagcaacc aggtgcccgt aaaatgtcct caagattgtt ctcgcttggt ggacgtcgaa caatgtagga attttcttcc tcctgattta gtggaattat acacgaaatc tttgatagaa gccagcattc ccgaatcaga aagagtttac tgccccttta ccaattgttc agctttaatg tccaaaggtg atctgaatcc ttcctccagg ccaagctctt ccaggccaag ctcttccaga caacccaaat cattcgcaat tgggcaggtc gaatgcatgg agtgtcatcg gctcttctgt gtggaatgcc aagttccttg gcatgcagac atgtcttgtg aggactataa caacctccct ccagatggaa gagctgcaga ggacatcaaa ctttacaaac ttgcaagtaa taagaactgg cagcgatgta cgaagtgtcg tcgcatgatc gagctggacc aaggttgcta tcacatgact tgcaggtacg agaagaatct ccctacaaag ggatatggga cgcggcttcc ctcctgaaat ctcattgttt acgttgatca tttgaatgct tccttttgtg taatttgttt gacttccgat tatcgtttcc agttttggat ctgtttttat attgccgaat gcttcgcggg tgtatgttat ggatacccaa gatctctttt tgaaatgttt acctttgatg ggttctcttg gtattgtcgg ccatgacagg caaatgcaca tgaggacttc tctaattata gttctgatat gatggtcaca gtcgtgtttc tgattattgt taacttttgg atccacatct gaggaaaagc atttcacaga atgtgaccat cttagttggg ggtgccttag tttgtaacta ttcattggag agagtccctt ggatttggtt tctgataaat gaaagatgga ttttctcgga cttggttgta aggacttgct tcagccccct ttttcgtttt agtctgaatc gagcctgatc gagccggcgc ctagaagcgc acgcagcgaa tcggcccgga cattgtcaga cagggccccg tcttgaaaac tgatttcaat ggaagggtat cgtctctgaa tcactctacg agctaataga atgctattag ctcgtagagt gcttctgtga cctacagttc ctatacagac gttgagggtc ttcataacct ggtggctgca ttgtgtgtat agttgttaag tcaccttcag ggtagtattg aatacatcca aacgggttac gagttttttt ctacttgccg atgtgtacgt gaggcacaat atctgtttca agttgaattg ctcttttata caagtttggt tcttactggt gatggttttt ccagatgtgg gcatgaattt tgttacaagt gtggagctcc gtgggtggac aaacacgcaa cctgcaagtg caagctgtgg gatgaggagc atattgtagg ggatccattt tcctccgatt cagaaattga tgctaattca gaatctgacg tagactcggt cttcgatgac gacggtttat ttcctcgtcg ccggccattt aatccacttg cagtaagtga acttttatat aagacaaagc tttgtagata ctggatgtcg gggaactgcc gattaggaca gcactgtaaa tttgcccatg gagaacatga actacgatat ttgtaaatat tggatctcaa gaaggatcca tgaagatttt gtaggtgtga gggatgtcaa tcgagctgat gtaggtggcc tttggtggct gtatatagtt ttggaaattt taggtgtgag aaaccgtagg aagttcagct tgtaatgtgt gaatgtaaga agttctggca agtgcggaaa tgcttgaatt ttgtgatggc attttcacaa ctccatgtta ttgtaaagat cgatacagac actggattat tgaaatgtct tgatatact |
mRNA UTR + CDS |
| >Mp5g23860.1 gactttcgga cactgaatag ttttgagcga tgacatgatt gcttcattcg tacacacgag agctgtaggg ctgtcggaat gaaacctgcg agcgttaggc gacggggctt atgattggat tttgtccgct gggattcttt gcggggcgtt aatattccat ttgattgtag gaggaatttt tctcagagag tttgactgat tccgaatatt ccggtctgtg ggttgggtcg accagcccgg gcagtgaagt ggttcttgat ttgggcgaga gtagaattga agaggcagct gttgatgtgg gagtgcgtgg atttagagga atggcgagag gctcgttgct ggtggcagat tagctgagga tggggattga tggaactttg ttctggaaat tcgacactga tgccgcttga cttttccagc cccaccgtat tttattcaca tggtttgacg aggtacttct gaccagcttc tccacagaag ctgacgtgtt cgtttgttcg ttttttcaag gcggtatcaa tgtgcgggga gcagcatcga gtggtttctc gcgcgggcga atgttttctt aggcggacga ttgttcagag tactagagag tcatgtgagc tgcagagaaa tcgtcagtag cgtattttta gtgtgtactt ctatcgtaga tgttctctga cccatctgaa gctcaagagg aggattgagg tccgcggttc agtggcgatc ggtgccttcc gacttttttc gttcttgaaa gcggaggaaa gggaaggcag aggggaagtc ttgccttgat ttgcaatgtt cttctttctt gtttcgtaaa tcggatttga ggagtcagtc gaaggcttga atctgcgcgt gtggagctct gggggaaatt gacaggggca tttgtctgag aagggaaaga tggcagatgt agtagcagca cgtcagcaac tgctggaggt aaataaggcg acggtgatgt attcggactg ggagctggct tacgatttgc agttggagga ggcaatggct gcatcggcta tggatgtccc tcctgtcaaa tcacaaattc gtgagggtaa acgtcccgtg gaggagagct ttgtacaaga gacgttgccg aagaactcat tagataaaac tactctcgat gtaagggatc gcttttccgc attggggttt cagagtgcgg aattgcagat acttgaggaa atccttggag atcagaaaaa ggcggctaaa gaggcgcagg atttgataca agagtttcgg atgaggagtc acgataggca attcgcaaag tcagtggatg agatgcccga tacggaatgg gaggaagaag gggatatcta tgaggagcca ttccacggac ttgacgatga ctattgggat gaaaatcagg tctgtaagtt gtatactggc agggcgaggg aagaaccagg gcatgtggca atggcttggt ctttgaggga tgccgaaggc catgtgctgg tcgaatcagg caaatatctg gggatgggaa ccgcagccta tgtcgccgag tatacagcac ttattgaagg cctttcttac gctgtggcag ctggtgtgaa gaacatacaa gcacgtacgt tctctcaccc ggtgtttaat caggtttctg gtctatggaa agcccgtgct ccaaaacata taaagttgtt ggaagaagtg tttgaacata cgaagcagtt gaaggttttc aacataaggc tgacgtccag acgcactgtt gagaatctag cacatgatgc tattcggaag cacgttacac aggggccgaa ggatatcaag aggctaaagc cctcgtcatc cggattcgtt actactccag aggaaacgga tatgatagat tgtcccgtat gccttgagaa tgttcgagaa gctgacacct tcgtggtcca agagtgcctt catcggtttt gtgtgagttg cttgacccaa catgttcaga ttcgcgtcaa gagcaaccag gtgcccgtaa aatgtcctca agattgttct cgcttggtgg acgtcgaaca atgtaggaat tttcttcctc ctgatttagt ggaattatac acgaaatctt tgatagaagc cagcattccc gaatcagaaa gagtttactg cccctttacc aattgttcag ctttaatgtc caaaggtgat ctgaatcctt cctccaggcc aagctcttcc aggccaagct cttccagaca acccaaatca ttcgcaattg ggcaggtcga atgcatggag tgtcatcggc tcttctgtgt ggaatgccaa gttccttggc atgcagacat gtcttgtgag gactataaca acctccctcc agatggaaga gctgcagagg acatcaaact ttacaaactt gcaagtaata agaactggca gcgatgtacg aagtgtcgtc gcatgatcga gctggaccaa ggttgctatc acatgacttg cagatgtggg catgaatttt gttacaagtg tggagctccg tgggtggaca aacacgcaac ctgcaagtgc aagctgtggg atgaggagca tattgtaggg gatccatttt cctccgattc agaaattgat gctaattcag aatctgacgt agactcggtc ttcgatgacg acggtttatt tcctcgtcgc cggccattta atccacttgc agtaagtgaa cttttatata agacaaagct ttgtagatac tggatgtcgg ggaactgccg attaggacag cactgtaaat ttgcccatgg agaacatgaa ctacgatatt tgtaaatatt ggatctcaag aaggatccat gaagattttg taggtgtgag ggatgtcaat cgagctgatg taggtggcct ttggtggctg tatatagttt tggaaatttt aggtgtgaga aaccgtagga agttcagctt gtaatgtgtg aatgtaagaa gttctggcaa gtgcggaaat gcttgaattt tgtgatggca ttttcacaac tccatgttat tgtaaagatc gatacagaca ctggattatt gaaatgtctt gatatact |
CDS |
| >Mp5g23860.1 atggcagatg tagtagcagc acgtcagcaa ctgctggagg taaataaggc gacggtgatg tattcggact gggagctggc ttacgatttg cagttggagg aggcaatggc tgcatcggct atggatgtcc ctcctgtcaa atcacaaatt cgtgagggta aacgtcccgt ggaggagagc tttgtacaag agacgttgcc gaagaactca ttagataaaa ctactctcga tgtaagggat cgcttttccg cattggggtt tcagagtgcg gaattgcaga tacttgagga aatccttgga gatcagaaaa aggcggctaa agaggcgcag gatttgatac aagagtttcg gatgaggagt cacgataggc aattcgcaaa gtcagtggat gagatgcccg atacggaatg ggaggaagaa ggggatatct atgaggagcc attccacgga cttgacgatg actattggga tgaaaatcag gtctgtaagt tgtatactgg cagggcgagg gaagaaccag ggcatgtggc aatggcttgg tctttgaggg atgccgaagg ccatgtgctg gtcgaatcag gcaaatatct ggggatggga accgcagcct atgtcgccga gtatacagca cttattgaag gcctttctta cgctgtggca gctggtgtga agaacataca agcacgtacg ttctctcacc cggtgtttaa tcaggtttct ggtctatgga aagcccgtgc tccaaaacat ataaagttgt tggaagaagt gtttgaacat acgaagcagt tgaaggtttt caacataagg ctgacgtcca gacgcactgt tgagaatcta gcacatgatg ctattcggaa gcacgttaca caggggccga aggatatcaa gaggctaaag ccctcgtcat ccggattcgt tactactcca gaggaaacgg atatgataga ttgtcccgta tgccttgaga atgttcgaga agctgacacc ttcgtggtcc aagagtgcct tcatcggttt tgtgtgagtt gcttgaccca acatgttcag attcgcgtca agagcaacca ggtgcccgta aaatgtcctc aagattgttc tcgcttggtg gacgtcgaac aatgtaggaa ttttcttcct cctgatttag tggaattata cacgaaatct ttgatagaag ccagcattcc cgaatcagaa agagtttact gcccctttac caattgttca gctttaatgt ccaaaggtga tctgaatcct tcctccaggc caagctcttc caggccaagc tcttccagac aacccaaatc attcgcaatt gggcaggtcg aatgcatgga gtgtcatcgg ctcttctgtg tggaatgcca agttccttgg catgcagaca tgtcttgtga ggactataac aacctccctc cagatggaag agctgcagag gacatcaaac tttacaaact tgcaagtaat aagaactggc agcgatgtac gaagtgtcgt cgcatgatcg agctggacca aggttgctat cacatgactt gcagatgtgg gcatgaattt tgttacaagt gtggagctcc gtgggtggac aaacacgcaa cctgcaagtg caagctgtgg gatgaggagc atattgtagg ggatccattt tcctccgatt cagaaattga tgctaattca gaatctgacg tagactcggt cttcgatgac gacggtttat ttcctcgtcg ccggccattt aatccacttg cagtaagtga acttttatat aagacaaagc tttgtagata ctggatgtcg gggaactgcc gattaggaca gcactgtaaa tttgcccatg gagaacatga actacgatat ttgtaa |
Protein |
| >Mp5g23860.1 MADVVAARQQ LLEVNKATVM YSDWELAYDL QLEEAMAASA MDVPPVKSQI REGKRPVEES FVQETLPKNS LDKTTLDVRD RFSALGFQSA ELQILEEILG DQKKAAKEAQ DLIQEFRMRS HDRQFAKSVD EMPDTEWEEE GDIYEEPFHG LDDDYWDENQ VCKLYTGRAR EEPGHVAMAW SLRDAEGHVL VESGKYLGMG TAAYVAEYTA LIEGLSYAVA AGVKNIQART FSHPVFNQVS GLWKARAPKH IKLLEEVFEH TKQLKVFNIR LTSRRTVENL AHDAIRKHVT QGPKDIKRLK PSSSGFVTTP EETDMIDCPV CLENVREADT FVVQECLHRF CVSCLTQHVQ IRVKSNQVPV KCPQDCSRLV DVEQCRNFLP PDLVELYTKS LIEASIPESE RVYCPFTNCS ALMSKGDLNP SSRPSSSRPS SSRQPKSFAI GQVECMECHR LFCVECQVPW HADMSCEDYN NLPPDGRAAE DIKLYKLASN KNWQRCTKCR RMIELDQGCY HMTCRCGHEF CYKCGAPWVD KHATCKCKLW DEEHIVGDPF SSDSEIDANS ESDVDSVFDD DGLFPRRRPF NPLAVSELLY KTKLCRYWMS GNCRLGQHCK FAHGEHELRY L |