Mp7g09710



Description

Annotation

Database ID Description
KEGG K09338 HD-ZIP; homeobox-leucine zipper protein
KOG KOG0484 Transcription factor PHOX2/ARIX, contains HOX domain; [K]
Gene3D G3DSA:1.10.10.60 -
CDD cd00086 homeodomain
Pfam PF01852 START domain
SUPERFAMILY SSF46689 Homeodomain-like
PANTHER PTHR45654:SF52 HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1
MobiDBLite mobidb-lite consensus disorder prediction
PRINTS PR00031 Lambda-repressor HTH signature
SMART SM00234 START_1
Pfam PF00046 Homeodomain
Coils Coil Coil
ProSiteProfiles PS50071 'Homeobox' domain profile.
PANTHER PTHR45654 HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1
SUPERFAMILY SSF55961 Bet v1-like
ProSiteProfiles PS50848 START domain profile.
ProSitePatterns PS00027 'Homeobox' domain signature.
Gene3D G3DSA:3.30.530.20 -
CDD cd08875 START_ArGLABRA2_like
SMART SM00389 HOX_1
GO GO:0006355 regulation of transcription, DNA-templated
GO GO:0008289 lipid binding
GO GO:0003677 DNA binding
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
MapolyID Mapoly0156s0012 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC4HDZ transcription factor, HD, homeodomain protein Published
MpHD18 transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g09710.1 chr7:10932485..10937881 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.