Mp8g07450



Description

Annotation

Database ID Description
KOG KOG0526 Nucleosome-binding factor SPN, POB3 subunit; N-term missing; [KLB]
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00398 hmgende2
Gene3D G3DSA:1.10.30.10 DNA Binding (I)
Pfam PF00505 HMG (high mobility group) box
Coils Coil Coil
PANTHER PTHR46261:SF1 HIGH MOBILITY GROUP B PROTEIN 1
PANTHER PTHR46261 HIGH MOBILITY GROUP B PROTEIN 4-RELATED
CDD cd01390 HMGB-UBF_HMG-box
ProSiteProfiles PS50118 HMG boxes A and B DNA-binding domains profile.
SUPERFAMILY SSF47095 HMG-box
MapolyID Mapoly0013s0048 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHMGBOX1 transcription factor, HMG-box Published

Transcript models

Transcript ID Location Sequences Extract region
Mp8g07450.1 chr8:8481926..8485463 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.