| Database | ID | Description |
|---|---|---|
| KEGG | K13094 | RBM5_10; RNA-binding protein 5/10 |
| KOG | KOG0965 | Predicted RNA-binding protein, contains SWAP and G-patch domains; N-term missing; [R] |
| Pfam | PF01585 | G-patch domain |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSitePatterns | PS00028 | Zinc finger C2H2 type domain signature. |
| SMART | SM00443 | G-patch_5 |
| Coils | Coil | Coil |
| ProSiteProfiles | PS50174 | G-patch domain profile. |
| GO | GO:0003676 | nucleic acid binding |
| MapolyID | Mapoly0108s0049 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpC2H2-26 | transcription factor, C2H2-ZnF | Provisional |
Caution: MBEX data are analyzed based on the v7.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp8g14220.1 acccccctgc tgcccccctg cccccgccct gtccagtacg gtcctctgtt ccccacctcc catggcggca gcagcagcag caggagcatg aagcagagtc tcggagtgtt gctcgtgggc caagaatttt gccattctgc tgctgccgag gagctgaaag gctctcgtcc tgctggagaa attgggcggg cgagcagagg acgagggtgg tcgagaggag ccatgtcatg gaggagtccc gcggattgaa gactcgtcgg aattatcgtc gacggcactg ctcgcatggc ggtgatgatg aggaggagga cgaggaggac gacgatgatg agaaggacga gaaggacgag aagaattttg gtttgaattt cgagtccaga gctggcgagg atgggaattt gaagcagccg tcagcctcct ctgtgattcc tgtcgatgaa gccgtcgggg cttatgattc agcgttgggt tctgtcgatg gaggatcgct gtcagctcct cctccttctc ctcctcggga ggcatcgggg gctcaaggag ttggcagtgg gcggaatgga gcgcgcattg cgagtggaat tgggttccac atgctcagag cgatgggatg ggtaagatgc aggcccagtt tcaattccat ctaccgcggc catctttcat ttttacgaga gaatgttgga attgctgcgc aaggtcggtc gaggagtgag tcccttcgtc agaacacgat tgggattccc ttcttggatc gaattggtgg ccaatttaat ttatctcttg attttgaagc aagaatttcc tcttgaattg cggagatgga accgacgatg aatgttcggt atatgttgac atttgctcca cccgttctac gtacagccat agcaatattc atacaattct gcactgataa caatcctgaa ggtgaggtgg tcgagagatt tatatccgaa ttttccgtgc caatttgggc atcaattcgc tccaattgct gcgtgctcca atcatccctt caatttccac ttcttacact tctcaccgaa caatttaatg cgatggttcc cttcggtccg gctcgtccag cagcgctcta cacttcacct cgattttaac ctagcgcact gcaatccagc agcagacccg cagttccgag aatctcaact catcagtcag tgcaattttc caggtcgagt gaaactcaga atccatagca tcaaagtctg agcagattct gacacgaaag ttgttccgat gttacctctt gcagaccgag aacacggggc tcgggcaatc gaggaaaggc atggtcgacc ccattctccc cacatccaaa actggaaacc taggtatgaa attacactct ggtgcttgaa ttcgatcaat ttcctcattc tgcagtgaaa ttctcgcttg cccgctcgct cgctcgctta caccccaccc cacaatggtg aatttcgtgg tcgcttgatg caggtttagg gttcaacgcg agttcgacgt ccgtgcacga cactcagcaa gaagcgatca gacacttgca gaaggcgaag cgagaagagc gcgatcggaa actcaagctg aaggtaacaa ttacactgtc gcgatgatca ctatggcaag gaacgagcgt cgaggtttca atcgaatgcg caagtatctc aaaattcgaa atgccggagt tgaggttgaa gttgagggtt tagtgtcgat gcagatatcg accaaaatgg cggttctgcc cacgagggag ttcgcgagtc gtcgataagt gaagacattg agccttagag aacctcccct acctctggga catggtacga tacccgaaga ccagaggaag gacaaattgc gcttcttcga gtttcgaaaa aaagcagaac gtcaaatctc ctcctcgcgt gcaatttcag ctgcgaattg ctcgaaagag cccaatcagt ttaagtaatc ggtcgagcga gcatctgtgc ttctgtctcg agccagccag ccagcgagcc atggctttaa aaaggccagg aagtgaagct cgcactcttc gcttccattt atgtcgaatt tcatcttcag cagtcttcga ggctgtagaa tctcctccgc cccgcccgcc cgcccaaaag gcaggcagct ctcgcccaga atttcaccca ccagtcccaa tcagtcgcct actgtaccgc agaattaccc gactcctgct cctgctcctg cggcagatcc accaccatca ccatcaccac cggtgcagct tctcttgcag cagctgaagc agaggaagac cttttctgtg tccagttggc tcaaccaact ctttggaatc tctggcattg accctgaaag gaaattcaag tcctccagga ttgctcgtcc gaggacttca atggctgttt cttctttaat tgcaaatcct tacactggga ttctcagttg accaaggtca tcgaggattc gatttgtttg acagtttttc tacgaaagaa tattggcgct gtgagcgctt cagtatcctc cttgcagcca tcctgcattt ctccgatttg aatattgtca tcttcatgag agttattcgg atagaaaggt gtttccagat tgcccgcagg gattcgtgga ttcatggatt ccgaatccag cggctctgct gagattgagg acacaatcct gcggacgtcg agggaaaaat tcgaaaattc ctcgatccga ttcttcggta cctcatgagt atgcgatact gcacaatgtc tcgccacatg gttgctgtca tcgtacgctc gaaggaggac gattctactt ctgttcatgt cgtcgttcag ttcaggctgg gcttctccgc agtctgtcgg tatctgacca catcacctcg acggattcgt gatgaaactc cgtggtcgat ggaacgaggg cagaagtaga agaatcatca gagaggatag gtctctcctg attgagcggc tcggtgtcga gaccatttag aggttcggga tttctcctgg gcttgcgact gattctgttc catgccagaa ttagattgtc ttccctggcg ataagcgaga ggaagaggac atagtcatag tcatctgcct gctctgctct catagtcatc tgcctgattc aatttggaca ttgacgatgg acgcacttgt tgccttgctt gattattact ccgccagtag caccccggaa tgtgaaacgg ccccaattcg atcggcatgt aatgtcgagg aacaatcgcc tgattgcctg ctttcatgca accaaagctg gcacgggcgg gcgtgcgacc caatttgctc tttgaccacc tctcgcttga ctgattgccg acctttcacg aagactggtt ccgtttctga gcttgatgcc agcagcgggt acggaacagc gggagattga gcatgaaatg tgacgacgct catcaatcac aagcttgctc gagcgtggtc aaatcgtacg gaattgattt cgagggactg ccatcattcg aaagctcgag gaatttgctg tcaaattgta cggatttcat gtcgctgcgt gcgacagcca ctgaaagctc ttcttcacct gccggtgagt gggcacatcg gtgtgactgt gaCTctctcc ctccctccat tcgtgtgaga gtcacgcggg tgttatgcga tcgatctgat ttcctccatg tccttccgct cgctcgctct gtgtgtgagt gacattcgcg ctctgcacat ggatgatgat gagaatcatg atgatcctga tgcgtgtaca tcaagctccg aattggcccc gtgcatatta acctcagagc ccggaatgga cgacgctcac aattgggatg agcttcgttc gttcttcaac tcgggacgtt ctgcagcact tcccactctt cctctttggg agtatgagct cgagctccgg aatcgagaga aagattgtcg tttgacgaag atcactgggt tcagttgtag gagtagatgc tcagctttga gctctaatcc actgggaata aacttcccga gctctgcttc tgcatttcag agcactcgct cgtaggtagg aatcaggacc acgatgagat tgagtcgtgc atcgaatctg gttctctgta ttttgatgtc cttagaaatg tggctgcact cggctgcagt ctctctgcct ctctctgtct cctctcgatg gattgtggat gcgtctgaga cgagggtgaa gctcgcttgt gtgagctggg ccgctcactt ggaaaccatg gtgcccgagg ggctcgacaa gcagcctctt gccacaatca cggggctcat tgcttcatcg ggattcaact gcgttcgtct cacttacgcg acgtacatgt tcacgaggca agctctgggt gggcagactg ttgtcgagtc gctggagtcc tgggacctgg atctggccgc caagggagtc attgctcaca atccgggtct cgctcacttg agcgtcgtgg aagcttacag agaagtcgtg aagggcattg cagcgaagaa tctgatgatc gtcctcgaca atcatatgag ctccccgggc tggtgctgct ccgatgatga tggaaatggc ttctgggaag acaggttctt cgatcccgag gagtggctga gaggcttgca gatcgttgca gacctcgctc tcgattgcac gaacgtcgtg gggctgggtc tccgcaacga gcctcgagga cctcgtcaaa atgcagcagc ctggcgcaaa tatatggcgg tatgtggctg ctctcgtgtg tcgtgcatct cgttgagatc tttgaatttt gcagtgatgc tattccaaac tagaatgctg acctgaagta cagcttctaa agaatgtgag ctcggagggg ttagtcatat ggctgatgat gaaggctgat aagtgagtga tcgccacctc ttttttcttt ctggctgcag gagggcgctg agattgttca tgggctgaat ccgaacgtgc tgattttcat gtccggacta agctatgctt ctgacctcac tttcctctac tgggagccac tggcattcaa gaaccagttt ctgcgcagca agctcgttta tgaggtgcac tggtatgcgt ggtcctctgg aacagggtac agcaatggca acccgaatac gaattgcgct gctgacatcg gcaggttcat gaacgagacg ggattccttg ttgcttccaa tcacgcctac acctcacctc tagtggtatc ggagttcggt atgtatctga acggggaaag tcccggagac gatcgcttca tggactgcta ctttgcactg gcttcaaaac tggatctgga ctgggtttta tgggccctcc aaggaagcta ctaccgcaaa gatgggcagg cagactacga agaggtttat ggtctgctaa caaggtcttg ggatagagtc cgtaatccca gcttcctgca aagactacgg ggtttgcaat atcctctacc aggtgggtct tgaaattttt ttcatacgat gctagattat cgtgctgcta tacctgttga ttgtctctgt ttcatactcg gttgcataaa taaactgcta cttcatatct agatgtagtg tgctgcattc tacaaacctc atttggcgct gcggaagaag tctgtctaaa tctcaggctc tacaagggca gtgaccatgg gactttctaa tctgatattt attagaatat acttcactag tccatagcta gcctctgctg cttgttcggg acttgttgta gcactgactt tgcagtatcc ttattgtagc tcatcagttc tgggccagat gatctgatcg tgttcctgat cactttatcg gtgcttacac actttcgact aatctatttt ctttgcgcag gaccatcgag cggtgacgga actgtatatc gtgctctatt ccatcctgcc acaggcttgt gtgtctctcc agattctgat tctggtctgc tgctttcgcc atgttcgagt agctctagcg tgtgggccta cgactcgagt gcggatacga tgctcaagct gaaggggtct agcgctgtag tcaaagctac tgcagaaggc agtgttgcaa agcttgggag cggggtagat tgtgagggat gtcactggac tttagtcggt gacaccagac tccagtttac agtgtatgcg ggaggccgaa gcttgtgtct ggatggaaaa tctggttctg ctatcaccac ccgagactgc ctctgtgtga gtcgatatga gtgcgaagga aaccaagtgg taccaacgag tcaatggttt cagttcatcg aggccctgag tcctcttggc ccgatgagaa cgtgaccaac gcctggagag tcttgaacct tgtctgacag aggacttaca ggagtcgtgc cactcaaatc tggtctcctg gatgtatgcc ctggacatgg ttaggaattc caaagaatct cagagaatgt ccgaagatca ggactgactc ccaatctgct cagctcccag gccatgttgg ccactctgta atatactctc aggagctgaa tcagaatagt cagaatagtc cagtcaaaat agtcagattg cccagcttag agagggctga ctgataatca atgtaagttt tcgattatcg acaattaggt gcctctctag ctttcttgca ttacatgcaa gatactgata ccgttcagca aacgtcacat acagcgacac attgtgaagt aaccaacgaa ctcgttggtg tttcagttca tcaagtttct cctcggtggc agaaactttt ctgagcccct tcctctccat ctgcttagtg gcttgatgca gtaaacctgt ctgaagagac cagatcactt gtttcatagc gccttggcac cagcaggtcc atacactgcc gagattgtgc cttctcatgg aatctctact atgaaaggcc attgtccttc atcgttgcca gatgttttca gagattgatt cgaaaagaac ttgaacggac tcagtcattg tcgtgtttcc tttcctgcaa tatcaagttg tgggcggtca aatggtgaag acagcatggg cattgaattt tatttgggaa gaggtgttat gtgtgttgat gtatttgttg tataatggtc tcaagtttat gatccttaca gctggagaaa gcacaagaag cggaagaaga cgacgttttt atgagagaaa gtttcatagc tgtgtcggct aattctgatg gacaccctct ggagtcaagc tcttcttcat ttgtggaggg tgctacagag tccaagacgc catcgactct gtcaggatca ggtttgaaaa gctgttctct tgtctccatc aaattgagac ttttgtcttc gaaggtttcc atattgtgat ttgctctcga agtatcttgg tacattccgt ccagtagaaa ataatgctga atgtccagta aagcctgaca ttcagttgac agtcggaatt tggttcatgt ctgctgaaaa tgcaatcgga ttgcattgcc ctctcaagca ttccctatat atctgatggg gatcaaaaag ttcactgttg gataaattct ctgggctgtg aagtcggtcc attcatttga gacgtgcacg tggcagggct caagcttgaa gaggtcggac gatgtcctca ctgcagacaa cgcttcgaat caaaacaagg tttgaagtcg catgtgcagg ctcgccacgc aaagcttctt cgagcaacaa cgaggaggcc gttcaagaaa gagaggagac ggaagggtgc tgctgaaaaa cagtcaggcc aacggggagc agcgagagct cttgcaccgg tgaagcagga tttctctgtc tacgactgag gacgacgcct cctcgtgttc tcgaccttcc tgagactcga tctcgatcat ggcagctgtg aagtgatttt ggtcgtcaat atgtggactc cctttcaatg cctctatgaa tatataatcc ctttcatgtc tgaacatcca atcagtaatt attcacatgc caaagtgtgg ttcgtctgaa ctgcgac |
mRNA UTR + CDS |
| >Mp8g14220.1 acccccctgc tgcccccctg cccccgccct gtccagtacg gtcctctgtt ccccacctcc catggcggca gcagcagcag caggagcatg aagcagagtc tcggagtgtt gctcgtgggc caagaatttt gccattctgc tgctgccgag gagctgaaag gctctcgtcc tgctggagaa attgggcggg cgagcagagg acgagggtgg tcgagaggag ccatgtcatg gaggagtccc gcggattgaa gactcgtcgg aattatcgtc gacggcactg ctcgcatggc ggtgatgatg aggaggagga cgaggaggac gacgatgatg agaaggacga gaaggacgag aagaattttg gtttgaattt cgagtccaga gctggcgagg atgggaattt gaagcagccg tcagcctcct ctgtgattcc tgtcgatgaa gccgtcgggg cttatgattc agcgttgggt tctgtcgatg gaggatcgct gtcagctcct cctccttctc ctcctcggga ggcatcgggg gctcaaggag ttggcagtgg gcggaatgga gcgcgcattg cgagtggaat tgggttccac atgctcagag cgatgggatg gaccgagaac acggggctcg ggcaatcgag gaaaggcatg gtcgacccca ttctccccac atccaaaact ggaaacctag gtttagggtt caacgcgagt tcgacgtccg tgcacgacac tcagcaagaa gcgatcagac acttgcagaa ggcgaagcga gaagagcgcg atcggaaact caagctgaag ctggagaaag cacaagaagc ggaagaagac gacgttttta tgagagaaag tttcatagct gtgtcggcta attctgatgg acaccctctg gagtcaagct cttcttcatt tgtggagggt gctacagagt ccaagacgcc atcgactctg tcaggatcag ggctcaagct tgaagaggtc ggacgatgtc ctcactgcag acaacgcttc gaatcaaaac aaggtttgaa gtcgcatgtg caggctcgcc acgcaaagct tcttcgagca acaacgagga ggccgttcaa gaaagagagg agacggaagg gtgctgctga aaaacagtca ggccaacggg gagcagcgag agctcttgca ccggtgaagc aggatttctc tgtctacgac tgaggacgac gcctcctcgt gttctcgacc ttcctgagac tcgatctcga tcatggcagc tgtgaagtga ttttggtcgt caatatgtgg actccctttc aatgcctcta tgaatatata atccctttca tgtctgaaca tccaatcagt aattattcac atgccaaagt gtggttcgtc tgaactgcga c |
CDS |
| >Mp8g14220.1 atggaggagt cccgcggatt gaagactcgt cggaattatc gtcgacggca ctgctcgcat ggcggtgatg atgaggagga ggacgaggag gacgacgatg atgagaagga cgagaaggac gagaagaatt ttggtttgaa tttcgagtcc agagctggcg aggatgggaa tttgaagcag ccgtcagcct cctctgtgat tcctgtcgat gaagccgtcg gggcttatga ttcagcgttg ggttctgtcg atggaggatc gctgtcagct cctcctcctt ctcctcctcg ggaggcatcg ggggctcaag gagttggcag tgggcggaat ggagcgcgca ttgcgagtgg aattgggttc cacatgctca gagcgatggg atggaccgag aacacggggc tcgggcaatc gaggaaaggc atggtcgacc ccattctccc cacatccaaa actggaaacc taggtttagg gttcaacgcg agttcgacgt ccgtgcacga cactcagcaa gaagcgatca gacacttgca gaaggcgaag cgagaagagc gcgatcggaa actcaagctg aagctggaga aagcacaaga agcggaagaa gacgacgttt ttatgagaga aagtttcata gctgtgtcgg ctaattctga tggacaccct ctggagtcaa gctcttcttc atttgtggag ggtgctacag agtccaagac gccatcgact ctgtcaggat cagggctcaa gcttgaagag gtcggacgat gtcctcactg cagacaacgc ttcgaatcaa aacaaggttt gaagtcgcat gtgcaggctc gccacgcaaa gcttcttcga gcaacaacga ggaggccgtt caagaaagag aggagacgga agggtgctgc tgaaaaacag tcaggccaac ggggagcagc gagagctctt gcaccggtga agcaggattt ctctgtctac gactga |
Protein |
| >Mp8g14220.1 MEESRGLKTR RNYRRRHCSH GGDDEEEDEE DDDDEKDEKD EKNFGLNFES RAGEDGNLKQ PSASSVIPVD EAVGAYDSAL GSVDGGSLSA PPPSPPREAS GAQGVGSGRN GARIASGIGF HMLRAMGWTE NTGLGQSRKG MVDPILPTSK TGNLGLGFNA SSTSVHDTQQ EAIRHLQKAK REERDRKLKL KLEKAQEAEE DDVFMRESFI AVSANSDGHP LESSSSSFVE GATESKTPST LSGSGLKLEE VGRCPHCRQR FESKQGLKSH VQARHAKLLR ATTRRPFKKE RRRKGAAEKQ SGQRGAARAL APVKQDFSVY D |