| Database | ID | Description |
|---|---|---|
| KOG | KOG1040 | Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit); C-term missing; [A] |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSiteProfiles | PS50103 | Zinc finger C3H1-type profile. |
| Gene3D | G3DSA:4.10.1000.10 | CCCH zinc finger |
| SUPERFAMILY | SSF90229 | CCCH zinc finger |
| Pfam | PF18044 | CCCH-type zinc finger |
| PANTHER | PTHR13119:SF12 | PROTEIN SUPPRESSOR OF SABLE |
| Pfam | PF14608 | RNA-binding, Nab2-type zinc finger |
| PANTHER | PTHR13119 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI |
| SMART | SM00356 | c3hfinal6 |
| GO | GO:0046872 | metal ion binding |
| MapolyID | Mapoly0131s0021 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpC3H34 | transcription factor, C3H | Provisional |
Caution: MBEX data are analyzed based on the v7.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp8g18820.1 tcagagtggc gccttcgcag ttggcgcggg agtttgtctt gaaaaaaccg acggtacttg gcagctcatt ttgtcacgac agcggcgaga cagttgtgtc attcattttg catgttagag tttgaacggg aactgtgtcg tgggaagtga tgagatttct ccaggtgcct agaggtagac ggagaagtga aatggaatcg attcgaaatt ttcgtcgcac gggttttcgc gaggagagtt cgagcttctg aatgaagtcg agcttttctc ttacctgcac tccatggcga gcgaaagctc gaatcgcagt gagcagttat ggattcctct gcctacactg ccgcgaatat ctgtcgtatc cagctcgcgc gctcgattgg cacaccgcag accgatttca atttcactgc ctgtcaaagc gccgagctca tctcctcagt tgggtggaga gagctccgat gtcttgaatc cttcccaaca acaatttcct ttcgcacgcc ccgccgaagt cagtcaagtt gtccctctca ttgcttctct gcctgcctct gtctcgattt ctgagaatcg tttaggttca gtagattctg caagaggttt tctaaaaaac tgtgagcggt ccgatccatt ggccgcattt tcggctggcg gatctccttt ggaaaatact gaggatacgt cagtctcatc agtccttgac gataatactg gcaatgactg cttagatggt aacactgggc tagtcccttc tagtgagact ggatcagcta aactctgcga cgtttccagt ataaaatctc aggaggagcc gtcggagggt ctctcttctt cttgtgcttt tgtggtggat tccgttattc aaaagcagca aggaacgagc gtgcaggaac tgttgctaat tgagtccaac gctctgatag attgtggaga ggctggaaat tttattcagt gttacgatcc actactgccc tgtgctgatc aggctgcacg ctgtgaagat attgcatcat cggtgcagaa ttcgacgctg gacgtggagg tagctgaatt gaataataaa atagggctca attctgaaga aagcgaacct gaggaaggcc agcttccagg ggaatggagt ggaagtgatg actcggtaga acatagaagt ccgaattgtg atgtaaatga aaattatagc actatctctc tcgctggaga agaagatttt gcagctccgc tagtcgcagt gtgtacgcag acacagttcc gatccgaaga aaattcttct cttcctggct ctttaaattc aggatacaca gcactaccga gcagaatgac agaaacggcc aagaagaaga agaagaagaa acacaagaaa ggggaaggat ctaagaaaag agctagagaa aaatcaagtc aaaagtataa agagttgaaa agcaagaagc tcaaatccat tgctggtgag cacctaggta agtctctggt cgaaagactc ggacagagtg agaaccctga tttgcagaac gtaaagaggg acagtgcaga aactgaaaat caagagtcca agaatcagaa aagtagcagc tcaagggacg tgctcgaaga aggcgaaatt tctgaggtga caacatgttt tttattgtcg aatttacact caatgatgat tctaatcttc gtatcttttc ttcaataaat tttcgtgctc atgagttcct tgtgagtttc acggctgcat atttaatgta catctgctcc ctgtgatatt gattggacac agcacacctt taatatggtc gccagatcag tttgtaacta agctgatcag tgagtacttg aaagtgttcc gcagacacgc cctcatgttt ctttcaggga tctcttacaa aagtttctga tttgtacagc ccacccagat cagcaatggc atactgtttt ctcttgttga agatgaagta ggtctgtgga ctacagatga tatcgacgat cagttggttg ctcaggtgca attctacctc ttcttctaga gtgctaaaac tccaggagta ttttgtgctc aggttagttt tgatgaagac tattcatcat ttcctttctt agcatcagga gatacccaac gtcgtcctct ctgaaaattg agtcgtgaga ccaagcaaag gcatatggaa acgcaaaagc tgtataattt ccacaaatgt taaggtggtc gttagaaccg aacagcactt ataagggctt aattacttac gacttctgtt gtagatgtgg caaaaagata gtatgttacc tgatgtcgaa gctgatctaa gtatcaatga atttacaagc agccaaaatg ttgtgattcc agtaaaaatg tcaaatggcc ttactttcct gatagagttt tgccttggtg atttctcgtc gttctgaaga ctctgtcctg ttttctatga tgaatagatg gaagaagatg gtgctgtgaa gaaaaaacgt ggaccagaaa ctgctgagcg aatgctgaag agaaaggtaa actccaatca cgaaaatttc actcacgttt tttataactc ataagcgttt ttcttatgtc ctggagctcc ctgaaactat tttaagcctg cttctcagat ttaagaatca ggcaacgtgt atactgttag tattagttct agcgggtatg ccagacatga ttggattatg aacagtcttt actccactaa agttcattat gctgtaattg aatgaaggtt tcgaaccact acacatatac agtgagctgc tgcttttctg tgtcggttct caatggacca gctagttact atcttcacgt tttttgttgt ttccttggat tgtaggtcct tattagtaag gccagcttac atatgttctc gtatgtatca tagaagtgtc cagtcagctc ggcctcgcta ctgatcttca ggacttgagt tgtctgttcc ttgtactgaa ggcctgcctt tcctcaacag tgctggtctt aatgcgatga atgtgatgta gttcataatc gatgtgttct ttgccagatt gcaaagcgca agaaacgagc gcagaaagaa agagaattag gaattaggcg acccccacgg aattacgtga gcaagcctgt aaaagtgctt tgcacacact ttatgaaggg gcgatgtgca aaggttttaa actacccttt tccttgcatc ctctcttctc ggtcttctgt atcagatctc tgctggcggc atcattcaaa tagggtagat tgtccctgaa cattgtcgag aggctgtggc tataaaccat gagtagaacc atcctccggt ctgtaattta gtcctccagc atgtaagcgc aagatggctc ataaaccaaa gatctaaaca aaagcaaggt attatcgatg aatgattgca cgcatcttct tactttcatc tttcgtacag tattactagc ctagcttgtg aacgtcttga tatatatcat accgtgcgac atcaggattc gaatcagtga gcatggtcat gtttcccagc tcgcgcctgt ttctgcgtac catctagtaa aaaaggcact caggatgcct aaaagatttt atttgtaaac tttagatggc atcgtacggg agaaatgtag gctcagtttt gacttctctc tgtacgtgaa tgcagggtga gaactgcacg ttttcacacg atggggtacc attgacaaag caagaggttt gcgttcctac ttttgttctc cttgagttcg gatatcgatt gtataccctt tttttgcgtt aaaatatgag acgttctgaa cacggaagat tagctatatg gagactgcac gtttaagtac cggtacaagt tggatcaatc gctctgcgtt gtgaaacgtc taccaagatc ctgttgttgg caagggacta acgcagattt gacttcgtct tttgtcgtcg tctccccgcc atatgcagtc ttggaaccac tttccttgtg cttgctgaga atctgctgtt gataaagatt cagaggaaga cacggttcaa acacatactg tgataactct tattgtggaa agaggaggaa atagaacagc aaattaaaat aagaaagcct gtaaaacagt ctatcgcagt gattgttgag atgagagatg aaaatcgtaa atccacgcag atatctgttg tgtttacgac aagcataacc cttccttcgt cccttcatcg tatctttact tgattggact cgagcgcatg tcgacccata actttcttcc ttggtagtag cgtaggaatt agttatttac tacctactta gcttgactct taaaaacctg gttactcatg caagtttgtt tatttggctc attaaaattt tacaacaaat gcttcgctct acaggctgat tggtttacta gatgtcagct tcattttgac tttgaaagga gaaagctttt acttctgaac tcattaatct ctttattgtc atgcagccct gtaaattttt aatgagtcac tcatgcctta aaggagacga ttgtccctat tctcacgacc tcaaggcttt tccttgcaaa ttttttcata cgcgaggctt atgctatgac ggggacagct gtcttttctc tcatggggta tgttttccac gcttgttgcc aatttgtaca ttcctaaaat ctaacggcaa gaggagattt tttatttgaa atggctttga tcagtatgta catgaagcta cttgcattga agatgattgc actccctgca aaataaacta tctagtgttc aactttttga agtattttta atactgcttc gatatcattc gatcttagcg taagtcgttc aggctcagcc atattttgaa ggttcaagtg ctaacgggac gaactcctgt tccatcaacg tatggtcatt tgttctgatt gtttcctgac tcgtgctttg aaacagccga taagtgaaga agcacgcgag aagatactca agcgtgttga gaaggaaaag aaggaacgtg ccagtaatgg ctgtggactt gaaataccga cacctttatt ttcatctcct ttgcctgcag aggatgatcc tgatccttta gggtggggaa cctcaaactc atgccctagt ttcgacgtgg atttaccgca aggaagacca ggaataattg aactatcacg tgactacatt ggtgaagctg gatgcgggga tcttgttgag aatagccatc atgcttacag caacttggag acttcatctt acccgggagt aaatttcgca caagatatct ctctttatga ttctcatctt cctggtaagg acaacagaga tgaaaagctc gattatgtag gtgagaaatg cagtagctcg cagcagacca cattctcaac cgctactctt gatgcagccg agacggatct aacttcatcc agggaagttt ctgcgctgaa tacagcagga cctctgtttc cgtttcagag gggatgtgtg tttgaaaatg gagttctcga gcataagaag tcagttccaa gtttgacgca aaccacagaa agtagaaagc ttaccataga gaatctcttg ggtgaagttt tgagacactg aatacaatat ttcataattt tgtacatcat tttacatcaa gtgcc |
mRNA UTR + CDS |
| >Mp8g18820.1 tcagagtggc gccttcgcag ttggcgcggg agtttgtctt gaaaaaaccg acggtacttg gcagctcatt ttgtcacgac agcggcgaga cagttgtgtc attcattttg catgttagag tttgaacggg aactgtgtcg tgggaagtga tgagatttct ccaggtgcct agaggtagac ggagaagtga aatggaatcg attcgaaatt ttcgtcgcac gggttttcgc gaggagagtt cgagcttctg aatgaagtcg agcttttctc ttacctgcac tccatggcga gcgaaagctc gaatcgcagt gagcagttat ggattcctct gcctacactg ccgcgaatat ctgtcgtatc cagctcgcgc gctcgattgg cacaccgcag accgatttca atttcactgc ctgtcaaagc gccgagctca tctcctcagt tgggtggaga gagctccgat gtcttgaatc cttcccaaca acaatttcct ttcgcacgcc ccgccgaagt cagtcaagtt gtccctctca ttgcttctct gcctgcctct gtctcgattt ctgagaatcg tttaggttca gtagattctg caagaggttt tctaaaaaac tgtgagcggt ccgatccatt ggccgcattt tcggctggcg gatctccttt ggaaaatact gaggatacgt cagtctcatc agtccttgac gataatactg gcaatgactg cttagatggt aacactgggc tagtcccttc tagtgagact ggatcagcta aactctgcga cgtttccagt ataaaatctc aggaggagcc gtcggagggt ctctcttctt cttgtgcttt tgtggtggat tccgttattc aaaagcagca aggaacgagc gtgcaggaac tgttgctaat tgagtccaac gctctgatag attgtggaga ggctggaaat tttattcagt gttacgatcc actactgccc tgtgctgatc aggctgcacg ctgtgaagat attgcatcat cggtgcagaa ttcgacgctg gacgtggagg tagctgaatt gaataataaa atagggctca attctgaaga aagcgaacct gaggaaggcc agcttccagg ggaatggagt ggaagtgatg actcggtaga acatagaagt ccgaattgtg atgtaaatga aaattatagc actatctctc tcgctggaga agaagatttt gcagctccgc tagtcgcagt gtgtacgcag acacagttcc gatccgaaga aaattcttct cttcctggct ctttaaattc aggatacaca gcactaccga gcagaatgac agaaacggcc aagaagaaga agaagaagaa acacaagaaa ggggaaggat ctaagaaaag agctagagaa aaatcaagtc aaaagtataa agagttgaaa agcaagaagc tcaaatccat tgctggtgag cacctaggta agtctctggt cgaaagactc ggacagagtg agaaccctga tttgcagaac gtaaagaggg acagtgcaga aactgaaaat caagagtcca agaatcagaa aagtagcagc tcaagggacg tgctcgaaga aggcgaaatt tctgagccca cccagatcag caatggcata ctgttttctc ttgttgaaga tgaagtaggt ctgtggacta cagatgatat cgacgatcag ttggttgctc agatggaaga agatggtgct gtgaagaaaa aacgtggacc agaaactgct gagcgaatgc tgaagagaaa gattgcaaag cgcaagaaac gagcgcagaa agaaagagaa ttaggaatta ggcgaccccc acggaattac gtgagcaagc ctgtaaaagt gctttgcaca cactttatga aggggcgatg tgcaaagggt gagaactgca cgttttcaca cgatggggta ccattgacaa agcaagagcc ctgtaaattt ttaatgagtc actcatgcct taaaggagac gattgtccct attctcacga cctcaaggct tttccttgca aattttttca tacgcgaggc ttatgctatg acggggacag ctgtcttttc tctcatgggc cgataagtga agaagcacgc gagaagatac tcaagcgtgt tgagaaggaa aagaaggaac gtgccagtaa tggctgtgga cttgaaatac cgacaccttt attttcatct cctttgcctg cagaggatga tcctgatcct ttagggtggg gaacctcaaa ctcatgccct agtttcgacg tggatttacc gcaaggaaga ccaggaataa ttgaactatc acgtgactac attggtgaag ctggatgcgg ggatcttgtt gagaatagcc atcatgctta cagcaacttg gagacttcat cttacccggg agtaaatttc gcacaagata tctctcttta tgattctcat cttcctggta aggacaacag agatgaaaag ctcgattatg taggtgagaa atgcagtagc tcgcagcaga ccacattctc aaccgctact cttgatgcag ccgagacgga tctaacttca tccagggaag tttctgcgct gaatacagca ggacctctgt ttccgtttca gaggggatgt gtgtttgaaa atggagttct cgagcataag aagtcagttc caagtttgac gcaaaccaca gaaagtagaa agcttaccat agagaatctc ttgggtgaag ttttgagaca ctgaatacaa tatttcataa ttttgtacat cattttacat caagtgcc |
CDS |
| >Mp8g18820.1 atggcgagcg aaagctcgaa tcgcagtgag cagttatgga ttcctctgcc tacactgccg cgaatatctg tcgtatccag ctcgcgcgct cgattggcac accgcagacc gatttcaatt tcactgcctg tcaaagcgcc gagctcatct cctcagttgg gtggagagag ctccgatgtc ttgaatcctt cccaacaaca atttcctttc gcacgccccg ccgaagtcag tcaagttgtc cctctcattg cttctctgcc tgcctctgtc tcgatttctg agaatcgttt aggttcagta gattctgcaa gaggttttct aaaaaactgt gagcggtccg atccattggc cgcattttcg gctggcggat ctcctttgga aaatactgag gatacgtcag tctcatcagt ccttgacgat aatactggca atgactgctt agatggtaac actgggctag tcccttctag tgagactgga tcagctaaac tctgcgacgt ttccagtata aaatctcagg aggagccgtc ggagggtctc tcttcttctt gtgcttttgt ggtggattcc gttattcaaa agcagcaagg aacgagcgtg caggaactgt tgctaattga gtccaacgct ctgatagatt gtggagaggc tggaaatttt attcagtgtt acgatccact actgccctgt gctgatcagg ctgcacgctg tgaagatatt gcatcatcgg tgcagaattc gacgctggac gtggaggtag ctgaattgaa taataaaata gggctcaatt ctgaagaaag cgaacctgag gaaggccagc ttccagggga atggagtgga agtgatgact cggtagaaca tagaagtccg aattgtgatg taaatgaaaa ttatagcact atctctctcg ctggagaaga agattttgca gctccgctag tcgcagtgtg tacgcagaca cagttccgat ccgaagaaaa ttcttctctt cctggctctt taaattcagg atacacagca ctaccgagca gaatgacaga aacggccaag aagaagaaga agaagaaaca caagaaaggg gaaggatcta agaaaagagc tagagaaaaa tcaagtcaaa agtataaaga gttgaaaagc aagaagctca aatccattgc tggtgagcac ctaggtaagt ctctggtcga aagactcgga cagagtgaga accctgattt gcagaacgta aagagggaca gtgcagaaac tgaaaatcaa gagtccaaga atcagaaaag tagcagctca agggacgtgc tcgaagaagg cgaaatttct gagcccaccc agatcagcaa tggcatactg ttttctcttg ttgaagatga agtaggtctg tggactacag atgatatcga cgatcagttg gttgctcaga tggaagaaga tggtgctgtg aagaaaaaac gtggaccaga aactgctgag cgaatgctga agagaaagat tgcaaagcgc aagaaacgag cgcagaaaga aagagaatta ggaattaggc gacccccacg gaattacgtg agcaagcctg taaaagtgct ttgcacacac tttatgaagg ggcgatgtgc aaagggtgag aactgcacgt tttcacacga tggggtacca ttgacaaagc aagagccctg taaattttta atgagtcact catgccttaa aggagacgat tgtccctatt ctcacgacct caaggctttt ccttgcaaat tttttcatac gcgaggctta tgctatgacg gggacagctg tcttttctct catgggccga taagtgaaga agcacgcgag aagatactca agcgtgttga gaaggaaaag aaggaacgtg ccagtaatgg ctgtggactt gaaataccga cacctttatt ttcatctcct ttgcctgcag aggatgatcc tgatccttta gggtggggaa cctcaaactc atgccctagt ttcgacgtgg atttaccgca aggaagacca ggaataattg aactatcacg tgactacatt ggtgaagctg gatgcgggga tcttgttgag aatagccatc atgcttacag caacttggag acttcatctt acccgggagt aaatttcgca caagatatct ctctttatga ttctcatctt cctggtaagg acaacagaga tgaaaagctc gattatgtag gtgagaaatg cagtagctcg cagcagacca cattctcaac cgctactctt gatgcagccg agacggatct aacttcatcc agggaagttt ctgcgctgaa tacagcagga cctctgtttc cgtttcagag gggatgtgtg tttgaaaatg gagttctcga gcataagaag tcagttccaa gtttgacgca aaccacagaa agtagaaagc ttaccataga gaatctcttg ggtgaagttt tgagacactg a |
Protein |
| >Mp8g18820.1 MASESSNRSE QLWIPLPTLP RISVVSSSRA RLAHRRPISI SLPVKAPSSS PQLGGESSDV LNPSQQQFPF ARPAEVSQVV PLIASLPASV SISENRLGSV DSARGFLKNC ERSDPLAAFS AGGSPLENTE DTSVSSVLDD NTGNDCLDGN TGLVPSSETG SAKLCDVSSI KSQEEPSEGL SSSCAFVVDS VIQKQQGTSV QELLLIESNA LIDCGEAGNF IQCYDPLLPC ADQAARCEDI ASSVQNSTLD VEVAELNNKI GLNSEESEPE EGQLPGEWSG SDDSVEHRSP NCDVNENYST ISLAGEEDFA APLVAVCTQT QFRSEENSSL PGSLNSGYTA LPSRMTETAK KKKKKKHKKG EGSKKRAREK SSQKYKELKS KKLKSIAGEH LGKSLVERLG QSENPDLQNV KRDSAETENQ ESKNQKSSSS RDVLEEGEIS EPTQISNGIL FSLVEDEVGL WTTDDIDDQL VAQMEEDGAV KKKRGPETAE RMLKRKIAKR KKRAQKEREL GIRRPPRNYV SKPVKVLCTH FMKGRCAKGE NCTFSHDGVP LTKQEPCKFL MSHSCLKGDD CPYSHDLKAF PCKFFHTRGL CYDGDSCLFS HGPISEEARE KILKRVEKEK KERASNGCGL EIPTPLFSSP LPAEDDPDPL GWGTSNSCPS FDVDLPQGRP GIIELSRDYI GEAGCGDLVE NSHHAYSNLE TSSYPGVNFA QDISLYDSHL PGKDNRDEKL DYVGEKCSSS QQTTFSTATL DAAETDLTSS REVSALNTAG PLFPFQRGCV FENGVLEHKK SVPSLTQTTE SRKLTIENLL GEVLRH |