Mp8g13820



Description

Annotation

Database ID Description
KEGG K07897 Ras-related protein Rab-7A
KOG KOG0394 Ras-related GTPase; [R]
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
ProSiteProfiles PS51419 small GTPase Rab1 family profile.
Pfam PF00071 Ras family
CDD cd01862 Rab7
SMART SM00176 ran_sub_2
SMART SM00174 rho_sub_3
PANTHER PTHR47981 RAB FAMILY
TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain
PRINTS PR00449 Transforming protein P21 ras signature
SMART SM00173 ras_sub_4
PANTHER PTHR47981:SF4 RAS-RELATED PROTEIN RABG3F
SMART SM00175 rab_sub_5
Gene3D G3DSA:3.40.50.300 -
MapolyID Mapoly0946s0001 -

Nomenclature

Gene symbol Product Transcript ID Status
MpRAB7 RAB GTPase Published

Associated Literature (AI-based literature mining, Beta-version)

Endosomal Rab GTPase; mCitrine-MpRab7 transgenic plants showed strong labeling of intracellular infection structures and hyphae in living Marchantia cells at 3 dpi, indicating recruitment of trafficking machinery to the pathogen interface.

1 core 1 peripheral

Carella, P., et al. (2018) · Proceedings of the National Academy of Sciences USA: doi/10.1073/pnas.1717900115  research experimental subject
Endosomal Rab GTPase; mCitrine-MpRab7 transgenic plants showed strong labeling of intracellular infection structures and hyphae in living Marchantia cells at 3 dpi, indicating recruitment of trafficking machinery to the pathogen interface.
Minamino, N., et al. (2018) · Plant and Cell Physiology  research sequence comparator
RAB7; family inventory.

Transcript models

Transcript ID Location Sequences Extract region
Mp8g13820.1 chr8:15484556..15487195 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.