Mp1g00090



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR15157 UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN
Pfam PF10186 Vacuolar sorting 38 and autophagy-related subunit 14
Coils Coil Coil
KOG KOG2896 UV radiation resistance associated protein; [R]
MapolyID Mapoly0103s0077 -
GO GO:0000149 SNARE binding
GO GO:0035493 SNARE complex assembly
GO GO:0000323 lytic vacuole
GO GO:0005768 endosome

Nomenclature

Gene symbol Product Transcript ID Status
MpATG14 Autophagy protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

Core autophagy-related gene. Mutants lacking this gene were analyzed and showed retention of excess mitochondria in spermatozoids, confirming autophagy's contribution to mitochondrial reduction.

1 core 0 peripheral

Norizuk, T., et al. (2022) · Autophagy  research experimental subject
Core autophagy-related gene. Mutants lacking this gene were analyzed and showed retention of excess mitochondria in spermatozoids, confirming autophagy's contribution to mitochondrial reduction.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g00090.1 chr1:110023..117653 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g00090.2 chr1:109395..117869 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g00090.3 chr1:110023..117653 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g00090.4 chr1:110023..117653 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g00090.5 chr1:110723..117594 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g00090.6 chr1:110723..117633 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g00090 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g00090 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.