Mp1g01820
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SUPERFAMILY | SSF57850 | RING/U-box |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. |
| SMART | SM00184 | ring_2 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. |
| PANTHER | PTHR23350 | PEROXISOME ASSEMBLY PROTEIN 10 |
| Pfam | PF13639 | Ring finger domain |
| CDD | cd16527 | RING-HC_PEX10 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) |
| Pfam | PF04757 | Pex2 / Pex12 amino terminal region |
| FunFam | G3DSA:3.30.40.10:FF:000418 | Peroxisome biogenesis factor 10 |
| KEGG | K13346 | peroxin-10 |
| KOG | KOG0317 | Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein; [O] |
| MapolyID | Mapoly0029s0064 | - |
| GO | GO:0007031 | peroxisome organization |
| GO | GO:0005778 | peroxisomal membrane |
| GO | GO:0016558 | protein import into peroxisome matrix |
| GO | GO:0008270 | zinc ion binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPEX10 | PEX10, RING complex | Published |
Associated Literature (AI-based literature mining, Beta-version)
PEX10, RING complex; RING complex (from nomenclature)
0 core 1 peripheral
Goto-Yamada, S., et al. (2022)
· Frontiers in Cell and Developmental Biology review citation background
M. polymorpha PEX10 (peroxin/peroxisome biogenesis)
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g01820 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g01820.1 GCCTGCCAAC TCGAGAACCC ATGCCTAGCT GGCACCTTCG ATCGCTCGAA GAGCAGCCTC AGCACAGACA GAGAGAGAAG GAGAGATGGA ACCACAACAG CAAATGTGCT GATGTGATAC GAGCGACTGT CAGGAGGATG GATTTTGACG CAGCATTGTG AATTCTTTCG TCTGCTTCTG CTCATTGGTG TCCGTCAAAT CGATATTCGT CTTGAATTCT CTGAATTCGC TAGGGGTGAT CTTCAGCCGA AAGGGAGGAA TTCAGGGATT GTGTTTCGAT GAACTGTGAC AATTCATCTT CTCATTCAGC AACTTTGGTT CGCCGATTCT AGGGACATTG TTAGCATCGT ACCATGTTTC TAGCAGTACG GGAAAGCGCA TTCATGGTCA AAGAATCGCC AAAGCGGACG TTGTCTTTCA TTTTTGTGGT CGTAATTCTC GGGTCATTGC GGTGTCTGCA CACCTAGGGT TGTATATTAT CCGCTCTTGG TTTAAATAGG CAGTTATTCG CAAACATGTC TCGGGAGGAA GCATCGGCAG ATGTTGAACG AGGAATTACT CCCAGTGATA CTACTAGCCA ACGCAGCGAG GATGTAATTG TGCAATTTGC AGCTGCCGCT CAACCCGAGA TGATGCGAGC CGCTGAGAAA GATGAGCATT ATGTGGGACA AGTTTGCGAG GCGTGTTATG ATGCTTTTCG GCATACTTTT GGTACGGCGT TTGACTTCTT TCGCTTTTCC TATTTTTGAA ATCAATTGCA TTTCTGTTTC CATCTTGTTA CTCTGAAATC TGGATGCTTG AAGCTGGACT ATCCTCTTCT GACCCCGTAG GCCTTGTTTT GAGCTTGAGC TTGAATCCTC ATGTACCATG ATTTGTCAGC TTTTTGTTCA TGGTTTTATA TATTTGAATC AATTCACTGC ATAGATCCCA TTACGAAATT CAGAAAACAG ATGTTTGTCT GGTCGTGAAC ACCCTTCTAC TCGCTGAGCT TGGCTTCCTG TTGGCAGGAA CAAGGCTGGC CGTTGCGTAC CAGAATGAGG TGAATGACTT GAATTTGTAT CTTGTTTCTC AGTTTGAGCA TTCATCTGGT TGGAGAAAAT CTGGCATAAT TTGTTTCTTG ATATGATACA TTCAAATATC TGTAATCTTC GTCTGTTACC TTGCTTTTAG ATTTGAACTT ATCTTCACAT TCATAATTTA CAGCTGGATT ATCCAACTTT GAACCTCTGA AGGACTTATT TGTGTTGCCT TGGGCCTTTT ACCTTGGTAG GTTGCAGCTG TGGTCAATGT TTCTTAGGAT TCTTGTTGCC CCATAAGTTC TGTCGACTCT GCTACCTAGT ACCCCTTCCA TTTGAGTGGA CAGAACGCAT CTCGAAGTCT GGGATCCTGA TCTGTTGTAC ATTCTCTCAT CAGTGGAAGC AGCAGACTAA ATTGTTCCTT GAAATCGTAC ATGATCTACA TCGATCTTTT ACGGTTAGGC TCGATAGACG ATAAGTAATA CGTGAAGCGC GAATAGACAG CACATTTGCA GTTTTGATAA TCTTTTACTG CGCTGTCACG GCTAACAAGA AATGAGAAGT GGTCCTTCTT TTTAGATGAA GTTAGCTGGA CGAGTACTCT ACTACCTCTT GACCACGGGG TCTGGTCTTC AAACTCTTGG AGAAGAATAT TGTGATATCG TCCAGGTAAT CAAGTTTAAG ATCAACCCAA TTAACGATGT GGCTCAATAC TTAATTTCTC TTATATATTC AACACCCGCT AAACTTTGGG TATGTCACAT TTGACACGGA TGATATCTAC CTACAGGTCG CAGGTGTTCC TGGTCTTCCT GCCACACCGG CCAGAAGAAC TTTGCTAGTG TTTTATCAGA CTGTTCTACC GTATCTTGCA GAACGGCTAA GGTATATGTT GATATGTTTT AGAAACTTAT GTTACTTTTT TTGTTTACTT ACTTGATGTA GAGCATATCA TTGACTTTGA TCAGCTTATT GATTAAGTTG ATATGTGCTG GAAGGGCAGC TACCCATCCT TTGGTTTACT TACTTACTTC GTACAGAGCG TATCTGTGAC TTCGGTTAGC TACGATTGAG TTGATATATC TTGGGAACTT GATTAAAAGG AACGAATTGT TTTTAACATT TTTTGCTTTG TCAGTGTTTT CTGTCAGGTT TTTTGCTGTT TTTCTCCAAC AGCTCCTCTG GGGGCCTCTT CTTTTCAGAT TTAACCATTG TCAGACAAAA GGAGTTGCAT TCTTTGGTTT ACCTACTTGA TTTAGGAAGT ATTTTCTCGT TGGATTAACT GAGTGATATA TGTCATTGCA AACATAGTTC AAGGGCGGCA GCACAAGGAA TGGCGTTAGG AGCTGAGGAT GAACCGAATG ATATGGATAT CGTGTCTCAA ATTTCTAGCG AGGAAGAGAG TGCCGATAGA GAAGCAAGCG GTTCTGAGAG GCTGGCGTCC TCAAACCTAA GAAGAAACGC CCTAGAGGTG AACTCTAGAA GTAGAATGTC TTTGACAGGA GGATTGCGTC AGGCCTGGAT GACAGCTTTA AGGCGTTGGG CAATGGTATT TTTTCTTCTC ATCACAATTT CCAAATTTTT TTTGTATCGG ACTTTCTTGT TACCTTTGTC AATTTATTCA TAAGGTTTCG ACGTTGGTCA TTTTGCTTTA TGGAGTTGCA TGAGTTCTTC AGGATTTAGG AAAAGCTTAC TCGCTCATTT TACCAATTTT TTGGTTGTTA TGTAGAGCAG ATACTTCCGT CAGTCCGTGA AGCCTTGATG CTGTTTGTGC GCACACACCT CATGCTATTT TATTTTGAAG GTCTGTCAGA ATCTTCTTTC TGCTACAATC TTTTGCTGCA TTTCTTTTCG TCTTGTAAAT CTCATCAAGG TCTTCAAGGC AGTCAGGTTG TATACCAATG CAGGTACAGT TAACTAGTGT CTCTGTAAGC AGGATATGTG ATGTTAACTC AAACTGCTTG CTTTACAACT ATGATAGGTA TATATTATCA TATGGGTAAG CGTGCAGCAG GAATTCGTTA CATTTTCACC GGCAGACCGA CCCAGCAGAG GCCGAGGTAC GACTTGATGA CACTTACTGA TAATTACTTG GTAAATATGA CCTTAAGACA ATAGCCCTGT ACTGACAAGA CTCATAGTAA TTCTAAGGAT TATTAGAATG TGCTCATTTG TTGTGACTGT TGACGACTTA CGTTTAACAA GTAAATTTTT TTAAGCTACT CGTTCTGTTT GCTGGCAGGT ACCATATGTT GGGGTTGTTT CTCTTTATCC AGCTAAGTTT TGTTTGCGGT GACTGGTTGA CACGCACGGT TTTTCCCTCC ATTGCTTCCT CAATGCGATC ACGGGCAGCC TATTCGTCTG TATCTCCTGC TGGTAGGTGT TAGCGGATTT ACCCATGCAC CATGATCGAA ATGCTTCTCA GCAGAACGAT ACCTCTGCTA TTGATTTTAC TCAGTAAATT CATGTGTGCT CTAGCTTTGC TTATCATCAT ATTGTATGTT TCGTATCAGA CTCTCGAGGG ATAGCTGTTA TCGATGAAGA TGGTGGAAAA TTAGATGACA AGGGCACTAA TAGGCAGTCA AGTCGTTGGG CAGATGCGGA GGTATGCTTC TCCTCTCATC ATTCGGGGCT ATAGAACTAT TCAGTATAGT AAACTCAATT TTTACCTTCG TTGACTAGAT GTCTATTGTA CAAGATTTGT ATTTGAAATG TAGTTGAGGT TTAATGATAC GTCAAGATAT ATCCATTTGC TGTATTGCAT TAAATTTTGA AATGGCTAGT ATGATCTAAT TGTAAATCTC AACTTCTTAT TTGACATTCC AGGCCCCTGG ATCAAGTAAA TGTCCTCTTT GTTTGAGTGC TCGTCAACAT CCAACTGCGA CGCCATGCGG GCATGTCTTT TGCTGGTAAA GATCAAAACT TATTTTGACA TTGTTACCAT TGATCTGCAC CCATCTACTG TAAGATTTCA GATTCTGTTA TCTCACAATT TACTCTTATG TATTCCCCTT GGTAACCAGG AACTGCGTGG CAGAGTGGTG CAATGAAAAA CCGGAATGTC CTCTATGTCG AGCTCCCGTA ACACACCCAG AACTGGTGTG CGTGTACCAC GCGGACTTTT GACGTATATG GACAAAATTG GTTAACTTCA CGCATCCAAA TAGATTAGCG AAGAGATGAA AGCAGAAGCA TGAATTGAGG AAAATTTATT TTAGACTAAA GATCAGTGAA CTGAGGTATG GATTTGACAA ACCACGTAGG TTGAGCATCA GCTTGTATAT CATGTTACAT TCAAGTTATA CGTGTTTGGG AAAGCAGGCA TTTAATCAGG ATAGTTAGAA AGACTTGACG CCTCTAGATG GGTTTGGCCT ACTATGTATC GGACTGCAAA AAATCCTCAG TTGATGACTT TGCAGTCTGG TTGCCTGCTT GATCGTAACC GAGGGCACTG AGGCCATCAA TAGCTATCAC ACGGCTTTCG AGTGTTGCGC TTATGTTTTA CATCATTTTC ATATTTAAAT GAGTCCAGCA TCCCCGCATG CAACACATGC GTCATGACTC GCAGAGAAAA ATTGACTTTC TTTTAACCGA |
mRNA UTR + CDS |
| >Mp1g01820.1 GCCTGCCAAC TCGAGAACCC ATGCCTAGCT GGCACCTTCG ATCGCTCGAA GAGCAGCCTC AGCACAGACA GAGAGAGAAG GAGAGATGGA ACCACAACAG CAAATGTGCT GATGTGATAC GAGCGACTGT CAGGAGGATG GATTTTGACG CAGCATTGTG AATTCTTTCG TCTGCTTCTG CTCATTGGTG TCCGTCAAAT CGATATTCGT CTTGAATTCT CTGAATTCGC TAGGGGTGAT CTTCAGCCGA AAGGGAGGAA TTCAGGGATT GTGTTTCGAT GAACTGTGAC AATTCATCTT CTCATTCAGC AACTTTGGTT CGCCGATTCT AGGGACATTG TTAGCATCGT ACCATGTTTC TAGCAGTACG GGAAAGCGCA TTCATGGTCA AAGAATCGCC AAAGCGGACG TTGTCTTTCA TTTTTGTGGT CGTAATTCTC GGGTCATTGC GGTGTCTGCA CACCTAGGGT TGTATATTAT CCGCTCTTGG TTTAAATAGG CAGTTATTCG CAAACATGTC TCGGGAGGAA GCATCGGCAG ATGTTGAACG AGGAATTACT CCCAGTGATA CTACTAGCCA ACGCAGCGAG GATGTAATTG TGCAATTTGC AGCTGCCGCT CAACCCGAGA TGATGCGAGC CGCTGAGAAA GATGAGCATT ATGTGGGACA AGTTTGCGAG GCGTGTTATG ATGCTTTTCG GCATACTTTT GGAACAAGGC TGGCCGTTGC GTACCAGAAT GAGATGAAGT TAGCTGGACG AGTACTCTAC TACCTCTTGA CCACGGGGTC TGGTCTTCAA ACTCTTGGAG AAGAATATTG TGATATCGTC CAGGTCGCAG GTGTTCCTGG TCTTCCTGCC ACACCGGCCA GAAGAACTTT GCTAGTGTTT TATCAGACTG TTCTACCGTA TCTTGCAGAA CGGCTAAGTT CAAGGGCGGC AGCACAAGGA ATGGCGTTAG GAGCTGAGGA TGAACCGAAT GATATGGATA TCGTGTCTCA AATTTCTAGC GAGGAAGAGA GTGCCGATAG AGAAGCAAGC GGTTCTGAGA GGCTGGCGTC CTCAAACCTA AGAAGAAACG CCCTAGAGGT GAACTCTAGA AGTAGAATGT CTTTGACAGG AGGATTGCGT CAGGCCTGGA TGACAGCTTT AAGGCGTTGG GCAATGATAC TTCCGTCAGT CCGTGAAGCC TTGATGCTGT TTGTGCGCAC ACACCTCATG CTATTTTATT TTGAAGGTAT ATATTATCAT ATGGGTAAGC GTGCAGCAGG AATTCGTTAC ATTTTCACCG GCAGACCGAC CCAGCAGAGG CCGAGGTACC ATATGTTGGG GTTGTTTCTC TTTATCCAGC TAAGTTTTGT TTGCGGTGAC TGGTTGACAC GCACGGTTTT TCCCTCCATT GCTTCCTCAA TGCGATCACG GGCAGCCTAT TCGTCTGTAT CTCCTGCTGA CTCTCGAGGG ATAGCTGTTA TCGATGAAGA TGGTGGAAAA TTAGATGACA AGGGCACTAA TAGGCAGTCA AGTCGTTGGG CAGATGCGGA GGCCCCTGGA TCAAGTAAAT GTCCTCTTTG TTTGAGTGCT CGTCAACATC CAACTGCGAC GCCATGCGGG CATGTCTTTT GCTGGAACTG CGTGGCAGAG TGGTGCAATG AAAAACCGGA ATGTCCTCTA TGTCGAGCTC CCGTAACACA CCCAGAACTG GTGTGCGTGT ACCACGCGGA CTTTTGACGT ATATGGACAA AATTGGTTAA CTTCACGCAT CCAAATAGAT TAGCGAAGAG ATGAAAGCAG AAGCATGAAT TGAGGAAAAT TTATTTTAGA CTAAAGATCA GTGAACTGAG GTATGGATTT GACAAACCAC GTAGGTTGAG CATCAGCTTG TATATCATGT TACATTCAAG TTATACGTGT TTGGGAAAGC AGGCATTTAA TCAGGATAGT TAGAAAGACT TGACGCCTCT AGATGGGTTT GGCCTACTAT GTATCGGACT GCAAAAAATC CTCAGTTGAT GACTTTGCAG TCTGGTTGCC TGCTTGATCG TAACCGAGGG CACTGAGGCC ATCAATAGCT ATCACACGGC TTTCGAGTGT TGCGCTTATG TTTTACATCA TTTTCATATT TAAATGAGTC CAGCATCCCC GCATGCAACA CATGCGTCAT GACTCGCAGA GAAAAATTGA CTTTCTTTTA ACCGA |
CDS |
| >Mp1g01820.1 ATGTCTCGGG AGGAAGCATC GGCAGATGTT GAACGAGGAA TTACTCCCAG TGATACTACT AGCCAACGCA GCGAGGATGT AATTGTGCAA TTTGCAGCTG CCGCTCAACC CGAGATGATG CGAGCCGCTG AGAAAGATGA GCATTATGTG GGACAAGTTT GCGAGGCGTG TTATGATGCT TTTCGGCATA CTTTTGGAAC AAGGCTGGCC GTTGCGTACC AGAATGAGAT GAAGTTAGCT GGACGAGTAC TCTACTACCT CTTGACCACG GGGTCTGGTC TTCAAACTCT TGGAGAAGAA TATTGTGATA TCGTCCAGGT CGCAGGTGTT CCTGGTCTTC CTGCCACACC GGCCAGAAGA ACTTTGCTAG TGTTTTATCA GACTGTTCTA CCGTATCTTG CAGAACGGCT AAGTTCAAGG GCGGCAGCAC AAGGAATGGC GTTAGGAGCT GAGGATGAAC CGAATGATAT GGATATCGTG TCTCAAATTT CTAGCGAGGA AGAGAGTGCC GATAGAGAAG CAAGCGGTTC TGAGAGGCTG GCGTCCTCAA ACCTAAGAAG AAACGCCCTA GAGGTGAACT CTAGAAGTAG AATGTCTTTG ACAGGAGGAT TGCGTCAGGC CTGGATGACA GCTTTAAGGC GTTGGGCAAT GATACTTCCG TCAGTCCGTG AAGCCTTGAT GCTGTTTGTG CGCACACACC TCATGCTATT TTATTTTGAA GGTATATATT ATCATATGGG TAAGCGTGCA GCAGGAATTC GTTACATTTT CACCGGCAGA CCGACCCAGC AGAGGCCGAG GTACCATATG TTGGGGTTGT TTCTCTTTAT CCAGCTAAGT TTTGTTTGCG GTGACTGGTT GACACGCACG GTTTTTCCCT CCATTGCTTC CTCAATGCGA TCACGGGCAG CCTATTCGTC TGTATCTCCT GCTGACTCTC GAGGGATAGC TGTTATCGAT GAAGATGGTG GAAAATTAGA TGACAAGGGC ACTAATAGGC AGTCAAGTCG TTGGGCAGAT GCGGAGGCCC CTGGATCAAG TAAATGTCCT CTTTGTTTGA GTGCTCGTCA ACATCCAACT GCGACGCCAT GCGGGCATGT CTTTTGCTGG AACTGCGTGG CAGAGTGGTG CAATGAAAAA CCGGAATGTC CTCTATGTCG AGCTCCCGTA ACACACCCAG AACTGGTGTG CGTGTACCAC GCGGACTTTT GA |
Protein |
| >Mp1g01820.1 MSREEASADV ERGITPSDTT SQRSEDVIVQ FAAAAQPEMM RAAEKDEHYV GQVCEACYDA FRHTFGTRLA VAYQNEMKLA GRVLYYLLTT GSGLQTLGEE YCDIVQVAGV PGLPATPARR TLLVFYQTVL PYLAERLSSR AAAQGMALGA EDEPNDMDIV SQISSEEESA DREASGSERL ASSNLRRNAL EVNSRSRMSL TGGLRQAWMT ALRRWAMILP SVREALMLFV RTHLMLFYFE GIYYHMGKRA AGIRYIFTGR PTQQRPRYHM LGLFLFIQLS FVCGDWLTRT VFPSIASSMR SRAAYSSVSP ADSRGIAVID EDGGKLDDKG TNRQSSRWAD AEAPGSSKCP LCLSARQHPT ATPCGHVFCW NCVAEWCNEK PECPLCRAPV THPELVCVYH ADF |