Mp1g02880



Description

Annotation

Database ID Description
PANTHER PTHR12542 EXOCYST COMPLEX PROTEIN EXO70
Pfam PF20669 Exocyst complex component Exo70 N-terminal
SUPERFAMILY SSF74788 Cullin repeat-like
Pfam PF03081 Exo70 exocyst complex subunit C-terminal
Gene3D G3DSA:1.20.1280.170 Exocyst complex component Exo70
KEGG K07195 exocyst complex component 7
KOG KOG2344 Exocyst component protein and related proteins; [U]
MapolyID Mapoly0113s0036 -
GO GO:0005546 phosphatidylinositol-4,5-bisphosphate binding
GO GO:0006887 exocytosis
GO GO:0000145 exocyst

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Exocyst paralog (Mp1g02880) tested as comparator; interacted only very weakly with MpPUB9 in yeast.

0 core 1 peripheral

Lim, C. J., et al. (2024) · New Phytologist  research experimental comparator
Exocyst paralog (Mp1g02880) tested as comparator; interacted only very weakly with MpPUB9 in yeast.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g02880.1 chr1:3205639..3210072 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g02880.2 chr1:3205613..3208981 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g02880 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g02880 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.