Mp1g02890



Description

Annotation

Database ID Description
FunFam G3DSA:1.10.10.10:FF:000008 E2F transcription factor 1
SUPERFAMILY SSF144074 E2F-DP heterodimerization region
Pfam PF16421 E2F transcription factor CC-MB domain
Coils Coil Coil
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
Gene3D G3DSA:1.10.10.10 -
Pfam PF02319 E2F/DP family winged-helix DNA-binding domain
PANTHER PTHR12081 TRANSCRIPTION FACTOR E2F
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM01372 E2F_TDP_2
CDD cd14660 E2F_DD
Gene3D G3DSA:6.10.250.540 -
KEGG K06620 transcription factor E2F3
KOG KOG2577 Transcription factor E2F/dimerization partner (TDP); [K]
KOG KOG3910 Helix loop helix transcription factor; N-term missing; C-term missing; [K]
MapolyID Mapoly0113s0037 -
GO GO:0005667 transcription regulator complex
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0046983 protein dimerization activity
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0090575 RNA polymerase II transcription regulator complex
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpE2F transcription factor, E2F/DP/DEL Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, E2F/DP/DEL (from nomenclature)

0 core 2 peripheral

Romani, F., et al. (2026) · The Plant Cell  research experimental comparator
E2F transcription factor (E2F-DP-RBR module); part of the surveyed core cell-cycle gene set.
Iwata KP, Shimizu T, Sakai Y, Furuya T, Fukumura H, Kondo Y, Masuda T, Ishizaki K, Fukaki H. (2025) · The New phytologist  research experimental tool
The MpE2F promoter (MpE2Fpro) was used as a driver in XVE estradiol-inducible constructs to conditionally express MpRLF.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g02890.1 chr1:3212382..3219579 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g02890.2 chr1:3212382..3220055 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g02890 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g02890 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.