Mp1g03950
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:3.30.50.10 | - |
| Pfam | PF00320 | GATA zinc finger |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| PANTHER | PTHR45658 | GATA TRANSCRIPTION FACTOR |
| CDD | cd00202 | ZnF_GATA |
| SMART | SM00401 | GATA_3 |
| PIRSF | PIRSF016992 | Txn_fac_GATA_plant |
| ProSiteProfiles | PS50114 | GATA-type zinc finger domain profile. |
| FunFam | G3DSA:3.30.50.10:FF:000018 | GATA transcription factor |
| ProSitePatterns | PS00344 | GATA-type zinc finger domain. |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) |
| KOG | KOG1601 | GATA-4/5/6 transcription factors; C-term missing; [K] |
| MapolyID | Mapoly0005s0212 | - |
| GO | GO:0043565 | sequence-specific DNA binding |
| GO | GO:0005634 | nucleus |
| GO | GO:0008270 | zinc ion binding |
| GO | GO:0003677 | DNA binding |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0045893 | positive regulation of DNA-templated transcription |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpGATA2 | transcription factor, GATA | Published |
Associated Literature (AI-based literature mining, Beta-version)
M. polymorpha C2C2-GATA TF assayed by ampDAP-seq; yielded a GATA-type TFBM (GATC).
1 core 1 peripheral
Zenker S, Wulf D, Meierhenrich A, Viehoever P, Becker S, Eisenhut M, Stracke R, Weisshaar B, Brautigam A. (2025)
· Plant Physiology research experimental subject
M. polymorpha C2C2-GATA TF assayed by ampDAP-seq; yielded a GATA-type TFBM (GATC).
Yelina, N. E., et al. (2024)
· Cell Reports research experimental background
MpGATA2 GATA TF; chloroplast development
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g03950 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g03950.1 GGCAGTGGCA TCTGCGGCCA GCCAGCTAGC GAGCGCGGCC GCCAGCTAGC GGTAGCAGCC GCGGCAGACG CCGAAGCATT AGAACAGTCG CACAGTGGTG CGCACTCTCG CTCTCGCTCT CGCCTCAACA TCATTCTTGC TTGCTTTCTT ACAGCGGCAC ATTTCTGTCA ATCTGATTGC GAGCCTAGTC CTCCGGCCCA GCTCCCAGAC ACAACACAAA CTGCCTCAGT TTAGACCGTG TCCTGCGTCC TACTTTTTTG TTCCGTTTCG GTACCTGCCC GGCCCTCGGG GGCAGCCTGC CCATCGTCGC TTGCCTTCTT TGTTCCGTGG CAGTGCATTG CTTGCAGTGC AGCAGCAGCA CCAGCCCCAG CCAACTCGCT CGCTCGCAAG CACAGCAGCA CAGCTCAGCT CAGCTCAGCT CAGCTCACTT CACTTCACTT CACTTCACTT CACTCACTCT CTCTTTCCAC TGCACTACTT TCGCACTCGG GTTCGAGATA GTCTTCTGGA GTGCGCCTTC AGTGGCACCC CTCTTTCTGC TGTCTGTCTG TGTCTGACTG ACTACTGCCT GACTCGACTC GACTCATTCA CTCACTCACC AGTCACCACT CACTCACTCA TTCACTCACT CACTCGACTC TACTCTACTC TACTCGCTCG TTCGCCCCCG CCCGCCCCCT TCTGTTTCTC TCTTACCTCG TCAAGCTCTC CTCTCTCTCT ATCTCTCTCT CTTCTCTCGA TATCTGTCAT CAATCCATCA ATCAATCCTC GTACCCACGA CCTTTCCTGT TGCCTAGCCT CGTATCGCGA AGCACCCGTC TCCACCTTTT GTGTCCACGC TGACCCTTCC TTCCTTCCCT TTTTTACACT TGCTTGGCCG TGTGCATTTG CCGCCTCTGG CTCGCAGCAA CACTCGAACC AGAAATTTTG CTACTTGCTA CTTATCACAC GAAGACCCTT CGTTCTGCCT GAAACAAACA GCTTCTCTAG AAACTTCAAA TCATCCTCCC ATTTTCTACT TTATAGTTTT ACTCTCTCCC TCTCCGTCCC TCTCTTTCTT TCTCTCCCTG TGTCTCCCTC TCTCTCTTCT CTCCCTCAAC GCTCAATTTG AATAACACCG CGCACTCTTC TGCTGCTCTC GTAGCTTCAT TCGTGTCCAA GTCGAATCCA GTCGCATCAC GCACTTCGCC TCTCTCTTGC TGTTCTGAAA GGAGCTGCGC ATTGCGTTCT GCGCAAGTTA GCCTCTGCTG GTCTACAACA TTACATGTAC GATACTCACC ACCAATTACT TGCGCTCCAT ATTGTGCTGT AAAATGGCAT CCAAATGACT TCTTTCTCTG CATAAGGGCT TAAGACTGTG ATTTCTCTCA AGGTTCCGCG TTCGAATGCA GTCAGTGTAG GAACGCAAGT TTCTGCTAGC AGTATAATGC CTTGTTTCTC CGGGTATCAT GAAAGATAAT ATTGTCATGG TGCCTGTGTG ACTCAGTCGC TGCTTCTGAA AAACCAAATG CCGGCTGTTG CCTAACTCTA TGAACCTGAT GATGATGTTT GAAGCCCGAG TGCTCCTCGA GCAATGTGCT CTCTTCTCTA GAAGCGGACG GCGGGCCCTC GTGTCGAGTC GCCGGCTGCT AATGATCCTG TTTCTTATAG ACCGCGGAAT TGACGAGCGA GCGAGCGTGA GTCCGACGGC CGCTCAGGAC TCTCGCTCGC GACGCCTGCC GCGCGTAGAA TCCTGTCCAA GATTTGTCCA TGTACGTGGG GTAGATAACA ACCAATTAGG AGTCTCGAGA CTCACCACAC CCACCAACAC CAAGCCAAAG AGCCGGACGG CCGACACGAA TTCTGAGTTC GTTCATCAGC CATGAACATC TTGCGTTTAT GCTGCCGTCT AGCTCGTGAA TTCTTGCTGC AACCTGAACC AATGGGGCGT ATTTACGGTT TCAAAATTTC GAAATCGTCG CTTCGAACTT TCGAACCCCG TAACGCTCCG AGACCCTCGG ACGCTGATTA ACCAAGAGAT TGCGCAAGTC CGAAGGCGCA GCCTCGACGC AGCCACCGAC AGCGCGGCTG AACTGATCTG TCGGGAAACG TAGTCTTGTG TTCAGACCGA CGGACGGACG GACTGCCAAA GCTCGGGGTT GACGTCGTTT CTGTTGTCAC TTGATCATGC ACAGGTAGTG GGATGGAGCT CTCAAGCACA TTCGCTGGTG CTTGTCCCGT CATCATGGGA GAGGCTTTCC ACATTGACGA TTTGTTGGAC TTCTCCAACG AGGACATTGC GGGGCCGATA GGCGAGGGTT TACTTTCGAG TCTGGACTCA ACAATTACGG ACGTCGAGAC GATCAGTACC ACCGGCAGCC CCTCGTTGGC AGGGACCAAG CACATTCTGG ATGGAGACGA CGTTGTAGCC GGAGACCTCT GCGTGCCTGT AAGTTCGCCC TTCCCTCATG CAGCGCAACG ATAGTATTTG CAGTAGCTGT CGTGGTAGCG AGAGCGTCGG CAGCAGCAGC CGTCGTATGA CAGTCCGTGG CAGCGAGGCC CGAGAGCAAT TGACCCGAAA CGTAACACTT TGTTGGCTCG TTCGTGAGTG CGTGCTGTAA CGAATGTAAG GAAAGAAGCG AAACGAATAG AATAACGAAA GTCAAGCTTC GAGGGGGATG GATTCTTGCA GTTTGTTTAC AATTTTACTT CTGTGGCTGG CCTTGCGCAG TATGCAGAGA TGGGGTTCTT TGTTGTTGAG AATGTTACGC TCACACAGCG CTTCCGTTGC CTGTGTGTGC CAGTGTGACG ATTTAGCTGA GCTGGAGTGG CTATCGAAAT TTGTCGAAGA CTCGTTTTCC ATGGGGGAGG CAACGAGACC CGTGACGAGC TCAGGCGGTC TCACCGTCAG CACTGACGTG CAGATTGAAT CATATACCAA CAAAGACAGG GACCGATTCC AGAGTGCGAG CCCCGTGTCC GTGTTAGAAA GCAGTGCTAG TTCGGAAAGA GCAAGTAATC TTTATCGAGA ATTGTCCGTG CCCGGCCGTG CACGCAGCAA GAGGGCTCGT ACCGGCGGGC GCGGGTGGGG CACGACAGCC CGCATACTTT CTTCGTCGAG CAATTCGGGT TCCGGTTCGG GCTCGGGTTC AGGGTCCGGG AATGATACCG AATCGTTGTC GTCGGACTCG AATGCCATGA CCGGAGGCGG CAACTCTTCC TCTCAAACTC TCTCTGTCGA CAGCCAAGCG ACTCCTTCAG CGGCCATGAT AGCACCGAAG GCTGTGTCTT CGAGTGCGAA GAAGCCTTGG AAAGCCAGCA AGAGTGGGAA GAAGGGGCAG GACGCTTCGC AACCGTGGCG GTGTATGCAT TGCTCGACGC AGCGAACGCC CCAATGGAGA GCAGGTCCAA TGGGTCCCAA GACTTTGTGT AATGCGTGCG GAGTGCGCTA CAAATCCGGT AGGCTTTTGC CCGAGTACAG GCCGGCGGGA AGTCCCGGTT ACATCGGTCA CAAGCACTCT AATTCTCATA AGAAGATTCT GGAAATGCGA AGGCAACGAG AACAGCAACA ACAGTCGCAA CCATCATCGA TGCTTTCGAG CTCGAGCTGT CAAGTGTCTC CGAACCACCT TTTAGAGCTC GAGGACCCCG ACATCTGCAA TTCGCAGAGT TAGACGACAT GGTCGTGAGA GTTCCAAAAA GACGGGAGAT TTTCACTTTT AGACAGCCAA GCCAAGCACA GCCCAGCCTA GCCCGCGATA GTCAAATTTA ATCAGTCCCC GACGGACGAC GACGTGACGT TTCAGTCTGT TCGTTTTTAT TCAAAGCCAG CCAATGTATA TGTGAAGAAG GAGAAGAAGA AGAGGGAGAA GAGATATTAA ACAATTCTCA GTTGCGAGAG AGCCCCGGAG AAAGAGAAGA AGAAGAGGAG GAGACAGAAA GACAGACAGA AGTTCCCTTG AGGTTTCCCT GGAGTGGGAA ATCCAATCAT TTTTTTTGCC TAGCTTCCGT TGAGAGGTGG GAAAGTTGGT GGCCAGTACA TTAGCTGGTT CGCTGGATAC GCAGCAGTTT AGACCCGACC CGACGCGACG AGACCCGACC CAAAACCAAG GAAGGAGGTC AGCCCATGCC ACCTGATGTT AAAATCTAGT GTTGTAAGTA TAGCAGTCAC TCACTTGACC TTACACGGGC CCAGATGATG TATTTTTGTA GATTACACTT TTAGCTGCGT CCTTCGAAGA TTCAGTTCAG ACCTGTTACT TAGCAGAGCG TGCTTACTGC CGGCGGGATT CTTAACCAGA TTTGTCAGAC ACGTTAGTCA GTTTATCATC ATCCATTACA CAGTCCAATC AGTTCGATCT CACTTTGTTT CACAATTCGT CTATCAATAA AAGTTAGCAA GAAACCATCC CTTTGGTGAT GC |
mRNA UTR + CDS |
| >Mp1g03950.1 GGCAGTGGCA TCTGCGGCCA GCCAGCTAGC GAGCGCGGCC GCCAGCTAGC GGTAGCAGCC GCGGCAGACG CCGAAGCATT AGAACAGTCG CACAGTGGTG CGCACTCTCG CTCTCGCTCT CGCCTCAACA TCATTCTTGC TTGCTTTCTT ACAGCGGCAC ATTTCTGTCA ATCTGATTGC GAGCCTAGTC CTCCGGCCCA GCTCCCAGAC ACAACACAAA CTGCCTCAGT TTAGACCGTG TCCTGCGTCC TACTTTTTTG TTCCGTTTCG GTACCTGCCC GGCCCTCGGG GGCAGCCTGC CCATCGTCGC TTGCCTTCTT TGTTCCGTGG CAGTGCATTG CTTGCAGTGC AGCAGCAGCA CCAGCCCCAG CCAACTCGCT CGCTCGCAAG CACAGCAGCA CAGCTCAGCT CAGCTCAGCT CAGCTCACTT CACTTCACTT CACTTCACTT CACTCACTCT CTCTTTCCAC TGCACTACTT TCGCACTCGG GTTCGAGATA GTCTTCTGGA GTGCGCCTTC AGTGGCACCC CTCTTTCTGC TGTCTGTCTG TGTCTGACTG ACTACTGCCT GACTCGACTC GACTCATTCA CTCACTCACC AGTCACCACT CACTCACTCA TTCACTCACT CACTCGACTC TACTCTACTC TACTCGCTCG TTCGCCCCCG CCCGCCCCCT TCTGTTTCTC TCTTACCTCG TCAAGCTCTC CTCTCTCTCT ATCTCTCTCT CTTCTCTCGA TATCTGTCAT CAATCCATCA ATCAATCCTC GTACCCACGA CCTTTCCTGT TGCCTAGCCT CGTATCGCGA AGCACCCGTC TCCACCTTTT GTGTCCACGC TGACCCTTCC TTCCTTCCCT TTTTTACACT TGCTTGGCCG TGTGCATTTG CCGCCTCTGG CTCGCAGCAA CACTCGAACC AGAAATTTTG CTACTTGCTA CTTATCACAC GAAGACCCTT CGTTCTGCCT GAAACAAACA GCTTCTCTAG AAACTTCAAA TCATCCTCCC ATTTTCTACT TTATAGTTTT ACTCTCTCCC TCTCCGTCCC TCTCTTTCTT TCTCTCCCTG TGTCTCCCTC TCTCTCTTCT CTCCCTCAAC GCTCAATTTG AATAACACCG CGCACTCTTC TGCTGCTCTC GTAGCTTCAT TCGTGTCCAA GTCGAATCCA GTCGCATCAC GCACTTCGCC TCTCTCTTGC TGTTCTGAAA GGAGCTGCGC ATTGCGTTCT GCGCAAGTTA GCCTCTGCTG GTCTACAACA TTACATGTAG TGGGATGGAG CTCTCAAGCA CATTCGCTGG TGCTTGTCCC GTCATCATGG GAGAGGCTTT CCACATTGAC GATTTGTTGG ACTTCTCCAA CGAGGACATT GCGGGGCCGA TAGGCGAGGG TTTACTTTCG AGTCTGGACT CAACAATTAC GGACGTCGAG ACGATCAGTA CCACCGGCAG CCCCTCGTTG GCAGGGACCA AGCACATTCT GGATGGAGAC GACGTTGTAG CCGGAGACCT CTGCGTGCCT TGTGACGATT TAGCTGAGCT GGAGTGGCTA TCGAAATTTG TCGAAGACTC GTTTTCCATG GGGGAGGCAA CGAGACCCGT GACGAGCTCA GGCGGTCTCA CCGTCAGCAC TGACGTGCAG ATTGAATCAT ATACCAACAA AGACAGGGAC CGATTCCAGA GTGCGAGCCC CGTGTCCGTG TTAGAAAGCA GTGCTAGTTC GGAAAGAGCA AGTAATCTTT ATCGAGAATT GTCCGTGCCC GGCCGTGCAC GCAGCAAGAG GGCTCGTACC GGCGGGCGCG GGTGGGGCAC GACAGCCCGC ATACTTTCTT CGTCGAGCAA TTCGGGTTCC GGTTCGGGCT CGGGTTCAGG GTCCGGGAAT GATACCGAAT CGTTGTCGTC GGACTCGAAT GCCATGACCG GAGGCGGCAA CTCTTCCTCT CAAACTCTCT CTGTCGACAG CCAAGCGACT CCTTCAGCGG CCATGATAGC ACCGAAGGCT GTGTCTTCGA GTGCGAAGAA GCCTTGGAAA GCCAGCAAGA GTGGGAAGAA GGGGCAGGAC GCTTCGCAAC CGTGGCGGTG TATGCATTGC TCGACGCAGC GAACGCCCCA ATGGAGAGCA GGTCCAATGG GTCCCAAGAC TTTGTGTAAT GCGTGCGGAG TGCGCTACAA ATCCGGTAGG CTTTTGCCCG AGTACAGGCC GGCGGGAAGT CCCGGTTACA TCGGTCACAA GCACTCTAAT TCTCATAAGA AGATTCTGGA AATGCGAAGG CAACGAGAAC AGCAACAACA GTCGCAACCA TCATCGATGC TTTCGAGCTC GAGCTGTCAA GTGTCTCCGA ACCACCTTTT AGAGCTCGAG GACCCCGACA TCTGCAATTC GCAGAGTTAG ACGACATGGT CGTGAGAGTT CCAAAAAGAC GGGAGATTTT CACTTTTAGA CAGCCAAGCC AAGCACAGCC CAGCCTAGCC CGCGATAGTC AAATTTAATC AGTCCCCGAC GGACGACGAC GTGACGTTTC AGTCTGTTCG TTTTTATTCA AAGCCAGCCA ATGTATATGT GAAGAAGGAG AAGAAGAAGA GGGAGAAGAG ATATTAAACA ATTCTCAGTT GCGAGAGAGC CCCGGAGAAA GAGAAGAAGA AGAGGAGGAG ACAGAAAGAC AGACAGAAGT TCCCTTGAGG TTTCCCTGGA GTGGGAAATC CAATCATTTT TTTTGCCTAG CTTCCGTTGA GAGGTGGGAA AGTTGGTGGC CAGTACATTA GCTGGTTCGC TGGATACGCA GCAGTTTAGA CCCGACCCGA CGCGACGAGA CCCGACCCAA AACCAAGGAA GGAGGTCAGC CCATGCCACC TGATGTTAAA ATCTAGTGTT GTAAGTATAG CAGTCACTCA CTTGACCTTA CACGGGCCCA GATGATGTAT TTTTGTAGAT TACACTTTTA GCTGCGTCCT TCGAAGATTC AGTTCAGACC TGTTACTTAG CAGAGCGTGC TTACTGCCGG CGGGATTCTT AACCAGATTT GTCAGACACG TTAGTCAGTT TATCATCATC CATTACACAG TCCAATCAGT TCGATCTCAC TTTGTTTCAC AATTCGTCTA TCAATAAAAG TTAGCAAGAA ACCATCCCTT TGGTGATGC |
CDS |
| >Mp1g03950.1 ATGGAGCTCT CAAGCACATT CGCTGGTGCT TGTCCCGTCA TCATGGGAGA GGCTTTCCAC ATTGACGATT TGTTGGACTT CTCCAACGAG GACATTGCGG GGCCGATAGG CGAGGGTTTA CTTTCGAGTC TGGACTCAAC AATTACGGAC GTCGAGACGA TCAGTACCAC CGGCAGCCCC TCGTTGGCAG GGACCAAGCA CATTCTGGAT GGAGACGACG TTGTAGCCGG AGACCTCTGC GTGCCTTGTG ACGATTTAGC TGAGCTGGAG TGGCTATCGA AATTTGTCGA AGACTCGTTT TCCATGGGGG AGGCAACGAG ACCCGTGACG AGCTCAGGCG GTCTCACCGT CAGCACTGAC GTGCAGATTG AATCATATAC CAACAAAGAC AGGGACCGAT TCCAGAGTGC GAGCCCCGTG TCCGTGTTAG AAAGCAGTGC TAGTTCGGAA AGAGCAAGTA ATCTTTATCG AGAATTGTCC GTGCCCGGCC GTGCACGCAG CAAGAGGGCT CGTACCGGCG GGCGCGGGTG GGGCACGACA GCCCGCATAC TTTCTTCGTC GAGCAATTCG GGTTCCGGTT CGGGCTCGGG TTCAGGGTCC GGGAATGATA CCGAATCGTT GTCGTCGGAC TCGAATGCCA TGACCGGAGG CGGCAACTCT TCCTCTCAAA CTCTCTCTGT CGACAGCCAA GCGACTCCTT CAGCGGCCAT GATAGCACCG AAGGCTGTGT CTTCGAGTGC GAAGAAGCCT TGGAAAGCCA GCAAGAGTGG GAAGAAGGGG CAGGACGCTT CGCAACCGTG GCGGTGTATG CATTGCTCGA CGCAGCGAAC GCCCCAATGG AGAGCAGGTC CAATGGGTCC CAAGACTTTG TGTAATGCGT GCGGAGTGCG CTACAAATCC GGTAGGCTTT TGCCCGAGTA CAGGCCGGCG GGAAGTCCCG GTTACATCGG TCACAAGCAC TCTAATTCTC ATAAGAAGAT TCTGGAAATG CGAAGGCAAC GAGAACAGCA ACAACAGTCG CAACCATCAT CGATGCTTTC GAGCTCGAGC TGTCAAGTGT CTCCGAACCA CCTTTTAGAG CTCGAGGACC CCGACATCTG CAATTCGCAG AGTTAG |
Protein |
| >Mp1g03950.1 MELSSTFAGA CPVIMGEAFH IDDLLDFSNE DIAGPIGEGL LSSLDSTITD VETISTTGSP SLAGTKHILD GDDVVAGDLC VPCDDLAELE WLSKFVEDSF SMGEATRPVT SSGGLTVSTD VQIESYTNKD RDRFQSASPV SVLESSASSE RASNLYRELS VPGRARSKRA RTGGRGWGTT ARILSSSSNS GSGSGSGSGS GNDTESLSSD SNAMTGGGNS SSQTLSVDSQ ATPSAAMIAP KAVSSSAKKP WKASKSGKKG QDASQPWRCM HCSTQRTPQW RAGPMGPKTL CNACGVRYKS GRLLPEYRPA GSPGYIGHKH SNSHKKILEM RRQREQQQQS QPSSMLSSSS CQVSPNHLLE LEDPDICNSQ S |