Mp1g06610
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR46623 | CARBOXYMETHYLENEBUTENOLIDASE-RELATED |
| SUPERFAMILY | SSF53474 | alpha/beta-Hydrolases |
| Gene3D | G3DSA:3.40.50.1820 | alpha/beta hydrolase |
| Pfam | PF01738 | Dienelactone hydrolase family |
| KEGG | K01061 | carboxymethylenebutenolidase [EC:3.1.1.45] |
| KOG | KOG3043 | Predicted hydrolase related to dienelactone hydrolase; [R] |
| MapolyID | Mapoly0043s0053 | - |
| GO | GO:0016787 | hydrolase activity |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Cited from prior work as an example M. polymorpha miRNA-target module (MpmiR11667.6-Mp1g06610) with a 3'-UTR cleavage site.
0 core 1 peripheral
Aggarwal, B., et al. (2024)
· RNA Biology research citation background
Cited from prior work as an example M. polymorpha miRNA-target module (MpmiR11667.6-Mp1g06610) with a 3'-UTR cleavage site.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g06610 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g06610.1 GTCGTCGAGC GCAGGAGCAT AAATGGCTTC CGCGCTGCGC CTGCCGCTGC CCTCGCTTCG TCCGCAGTTC AGCGCCTCGA TCCTTGCCCC GTCCTTCTGC GCCGGATCGT CTCAACTCCA CCGAGTCGCT GCCCACATTT TGCCCTCCCG CACGAAATTT GGCGTCCGAG CCATGGCCAC TTCGGCTTCT CCCCGCAAGA TTACCATCAA GCGAAATGGC GATGGAGCCA CTGTGAGTAA GAAGTGCTCT TGATGCCTGT GATTCTGGTT TAGTTCCACG CTGTTCGCTT TGCGCGTACG GATGATGGTC GGTGAAGACT GAGCTCGGGG ATCTGATCCG ATCAGATCCA TCGATCGATC GGTGGACTTC GCCTCTCTCG ATATCGATGA GAGTCCTTCT CTGTAGCCCT TGTTTACTCC CTTCCCTTCT TTCTCGTCCG TCTCCACCGA AACATAGCTT GGTTGTCGTG GCTCTGTTTG TCTCGATAGA ATCTCAATTA TCTCCTATTC GTCCACGTCT GCGAATTTGA TATTTTTTCA CATGGTTCGT GAAGCTGAAT GCGGGACCTA GATTTTCAAC TGAAAGTGGT AGGGATTGTG CTCTTTCTGG TCAGATCTTT GTCAGGCACC TCTTATAAAC ATTTCCTGTG ACGAGAAATG ACGAGCTTGC GTGAATGTCA AGCCTTTACT TTGGAATGCT CTATTTTGAA GAACAAGGTT TTCGTAAATT TGACAATTGT ATCCCACGGA AATCATCGTT CTGTCTACAG ATGAATTCAT CTGTGGTATT TTTCAGCTCT ATCATAGAAG CCGGACAAGT TTGGTGCAGC TCGCCGGTTC ATGTCATCTT ACAGAACATG TTAACGGAGA GTTGCTATTT TAATATTCGA AGCCACCTTA TTAGCCATTG AGGAGTCAGT TGTGACACGA AATCCTAGAC ACTGTGAGTA AGGATTCTTG TTATTTGACT CCGAATAGTT CCACAACGTA AATCATTGTT CCGACTTTTG ATGAATCCAG CTTCTACAAA TGCTGCATAA CAGAAGTCGG GCATGCTTGG TGGACCTGGA TCGTAGAAGT TCCGAGACGA GCGTGTCAAG GAACCTTTTG TCTTCTGATA CTTATAGCAA CCTGAATAGC TGAGAGATTC AGGTGGCTTG GACTATGAGA AGAGGAATCA GTGACCTATC ATGATACCTC ATATGTCAAC TGTTTACTTT ATATCTGCCC ACGAATTTAA GAGAACGTTC TTTTGTTCGA TGAACTCAAC TTCAGTATCT GCTTTTGAAA GCCTGACCAG TTCAGCGGAG GTACCCTGCT TGACAGTGTT TTCGTATGGA AATATACAAG TTACCACATC TTCTCTCCCT CGTTACCGAA ACTACCTAGA AGAGCTGTCG AGGCATCAGG AAACTTGATG TGAGCTATAA AATTTGTTGT GTGTTTGTAA TGTAGGAATT TGATGCTTAC GTTCTGGGCG ATGAAGGCGC CCCCGGGATC GTAGTCCTGC AAGAATGGTG GGGAGTCGAC TTTGAAATCA AGAACCATGC TGCAACCATT GCAAGCAATG GGTTCCGTAC TTTAATTCCT GAGTATGCTA TATCCTATCT CTTATTTCCC ATAAACTGTG CACATTCACT GACATGCACA TTAACTTGCA GTTCGTAGAC TACAAAACAC TGTGCCCACT ATGATATCAG CATTTAACGT CCAGTAAGTG GTGATCATAG TTGATGAGTA TATCAATTGA ATGTCTTGCT GTAGATCGCT CGTTACTGAT CTGCGAGGTT GGTACAAGCG AACTGTGTGT CTGGCTGATG AAATGAACGC TGTGACGATG TTCAATTGAA ATGTGCCATG CTCTCGGTGA GGTCTGATCG GTTCGAGATT ACATTTTTTT GTTACTTAAC TCGCTGCGCA GTCTATATCG AGGAAAGGTA GGCTTGGATG CTGCCGAAGC CCAACATCTG ATGGAAGGCT TGGACTGGCA AGGAGCGGTG AAGGATGTTG AAGCATCCGT CAAATGGTTG AAGGAGAATG GTTCCTCAAA GGTGGTTCTA ACTTCTGAGT CTCAATTCTT TTCCTATGCC ATAACCGGTT TTAACGCACG TCGTATTCTT TCATTCAAAG TCCAATCAAA TGACAAGCTT TTATGTTTTT TGCCACAGGT TGGTGTAACT GGGTTCTGTA TGGGTGGAGC TCTTACTTTG GCTAGCGCAG TCCTGATCCC TCAACTGGAT GCGGCTGTCG CGTTTTATGG AGTCCCAGAT GCGGGGCTCG CCGATGTCAG TAAAGTCAAA ATTCCTGTTC AGGCTCATTT TGGAGAGTTG GACAAGTTTG CAGGTTTCTC CGATGTCGGG GTGAGTCTCG CATATCGGTT GTTTAAGCCT GTCTTTCTCG CTCTTTAATA AGGAGACTGG ATTTTTCGCT CTTTGAAACC TTCAGCTGAA ATTCTCTATG TCGTATCCTA GAAGTTGTAT GAGGTTTCAT CAAGTCTGGC ACTGTATCCA ATTCTACGTC GTAACTCACC CTTTTTTGCC ACAAGACTTG GTTCATAACA CAGTAACTCA GCATGGATTG AGTCATGTAC CGGCGGATTA AGTTCAGGCC TCCTAGGCTT AATCTCATGG AAGACTTTGT TATGCTTTGA CCAACATGTC TTGTGCTCTA TAATTGTGCA GGCAGCCAAG GCCTTGGAAG AAAAATTAAA AACTTCTGGG GCTCCTTCTG AAGTACACAT CTACTCGAAC GTTGGCCACG CATTTATGAA CGCTTCTGAG GAGGCTATTA AACGTGGCAA GAATACAGGT TTTGAAGAGT TCAACAAAGA TGCTGTAGAC CTTGCATGGT CTAGATTTGA TACATGGTTC AAGAAGTATT TGTCGACTTA ATTCTTTAGA TCAGACAGCT TTCTGTGCTT AGATTGGAGG TTGTAACATA ATCTATATCC TCCTGTCTCA CAAAACTCAA AATTTTGAAA ACTGGAGACG TGTTCTGAGT TCTTCTTGAG GTAAATATAC TGAATGTGCA TATGCCGAGT ATG |
mRNA UTR + CDS |
| >Mp1g06610.1 GTCGTCGAGC GCAGGAGCAT AAATGGCTTC CGCGCTGCGC CTGCCGCTGC CCTCGCTTCG TCCGCAGTTC AGCGCCTCGA TCCTTGCCCC GTCCTTCTGC GCCGGATCGT CTCAACTCCA CCGAGTCGCT GCCCACATTT TGCCCTCCCG CACGAAATTT GGCGTCCGAG CCATGGCCAC TTCGGCTTCT CCCCGCAAGA TTACCATCAA GCGAAATGGC GATGGAGCCA CTGAATTTGA TGCTTACGTT CTGGGCGATG AAGGCGCCCC CGGGATCGTA GTCCTGCAAG AATGGTGGGG AGTCGACTTT GAAATCAAGA ACCATGCTGC AACCATTGCA AGCAATGGGT TCCGTACTTT AATTCCTGAT CTATATCGAG GAAAGGTAGG CTTGGATGCT GCCGAAGCCC AACATCTGAT GGAAGGCTTG GACTGGCAAG GAGCGGTGAA GGATGTTGAA GCATCCGTCA AATGGTTGAA GGAGAATGGT TCCTCAAAGG TTGGTGTAAC TGGGTTCTGT ATGGGTGGAG CTCTTACTTT GGCTAGCGCA GTCCTGATCC CTCAACTGGA TGCGGCTGTC GCGTTTTATG GAGTCCCAGA TGCGGGGCTC GCCGATGTCA GTAAAGTCAA AATTCCTGTT CAGGCTCATT TTGGAGAGTT GGACAAGTTT GCAGGTTTCT CCGATGTCGG GGCAGCCAAG GCCTTGGAAG AAAAATTAAA AACTTCTGGG GCTCCTTCTG AAGTACACAT CTACTCGAAC GTTGGCCACG CATTTATGAA CGCTTCTGAG GAGGCTATTA AACGTGGCAA GAATACAGGT TTTGAAGAGT TCAACAAAGA TGCTGTAGAC CTTGCATGGT CTAGATTTGA TACATGGTTC AAGAAGTATT TGTCGACTTA ATTCTTTAGA TCAGACAGCT TTCTGTGCTT AGATTGGAGG TTGTAACATA ATCTATATCC TCCTGTCTCA CAAAACTCAA AATTTTGAAA ACTGGAGACG TGTTCTGAGT TCTTCTTGAG GTAAATATAC TGAATGTGCA TATGCCGAGT ATG |
CDS |
| >Mp1g06610.1 ATGGCTTCCG CGCTGCGCCT GCCGCTGCCC TCGCTTCGTC CGCAGTTCAG CGCCTCGATC CTTGCCCCGT CCTTCTGCGC CGGATCGTCT CAACTCCACC GAGTCGCTGC CCACATTTTG CCCTCCCGCA CGAAATTTGG CGTCCGAGCC ATGGCCACTT CGGCTTCTCC CCGCAAGATT ACCATCAAGC GAAATGGCGA TGGAGCCACT GAATTTGATG CTTACGTTCT GGGCGATGAA GGCGCCCCCG GGATCGTAGT CCTGCAAGAA TGGTGGGGAG TCGACTTTGA AATCAAGAAC CATGCTGCAA CCATTGCAAG CAATGGGTTC CGTACTTTAA TTCCTGATCT ATATCGAGGA AAGGTAGGCT TGGATGCTGC CGAAGCCCAA CATCTGATGG AAGGCTTGGA CTGGCAAGGA GCGGTGAAGG ATGTTGAAGC ATCCGTCAAA TGGTTGAAGG AGAATGGTTC CTCAAAGGTT GGTGTAACTG GGTTCTGTAT GGGTGGAGCT CTTACTTTGG CTAGCGCAGT CCTGATCCCT CAACTGGATG CGGCTGTCGC GTTTTATGGA GTCCCAGATG CGGGGCTCGC CGATGTCAGT AAAGTCAAAA TTCCTGTTCA GGCTCATTTT GGAGAGTTGG ACAAGTTTGC AGGTTTCTCC GATGTCGGGG CAGCCAAGGC CTTGGAAGAA AAATTAAAAA CTTCTGGGGC TCCTTCTGAA GTACACATCT ACTCGAACGT TGGCCACGCA TTTATGAACG CTTCTGAGGA GGCTATTAAA CGTGGCAAGA ATACAGGTTT TGAAGAGTTC AACAAAGATG CTGTAGACCT TGCATGGTCT AGATTTGATA CATGGTTCAA GAAGTATTTG TCGACTTAA |
Protein |
| >Mp1g06610.1 MASALRLPLP SLRPQFSASI LAPSFCAGSS QLHRVAAHIL PSRTKFGVRA MATSASPRKI TIKRNGDGAT EFDAYVLGDE GAPGIVVLQE WWGVDFEIKN HAATIASNGF RTLIPDLYRG KVGLDAAEAQ HLMEGLDWQG AVKDVEASVK WLKENGSSKV GVTGFCMGGA LTLASAVLIP QLDAAVAFYG VPDAGLADVS KVKIPVQAHF GELDKFAGFS DVGAAKALEE KLKTSGAPSE VHIYSNVGHA FMNASEEAIK RGKNTGFEEF NKDAVDLAWS RFDTWFKKYL ST |