Mp1g11830



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF02042 RWP-RK domain
ProSiteProfiles PS51519 RWP-RK domain profile.
PANTHER PTHR46373 PROTEIN RKD4
KOG KOG2122 Beta-catenin-binding protein APC, contains ARM repeats; N-term missing; [TZ]
MapolyID Mapoly0014s0044 -
GO GO:0003700 DNA-binding transcription factor activity

Nomenclature

Gene symbol Product Transcript ID Status
MpMID RWP-RK domain containing protein of the MID clade Published
MpRWP2 RWP-RK domain containing protein of the MID clade Published
Also known as MpRWP2
Also known as MpMID

Associated Literature (AI-based literature mining, Beta-version)

RWP-RK transcription factor co-expressed with MpDUO1, but its loss does not affect MpDUO1 expression and male Mpmid knockout mutants remain fertile, indicating a non-essential role contrasting with its central role in Volvox.

1 core 2 peripheral

Higo, A., et al. (2018) · Nature Communications  research experimental subject
RWP-RK transcription factor co-expressed with MpDUO1, but its loss does not affect MpDUO1 expression and male Mpmid knockout mutants remain fertile, indicating a non-essential role contrasting with its central role in Volvox.
Rövekamp, M., et al. (2016) · Current Biology  research sequence comparator
RWP-RK family member (Mapoly0014s0044); phylogenetic comparison.
Wang, M., et al. (2024a) · Communications Biology  research sequence background
Listed only in the data availability/accession section (Mp1g11830); no functional analysis.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g11830.1 chr1:12291607..12295184 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g11830.2 chr1:12291607..12295184 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g11830 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g11830 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.