Mp1g12750



Description

Annotation

Database ID Description
ProSiteProfiles PS50863 B3 DNA-binding domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:2.40.330.10:FF:000001 Auxin response factor
FunFam G3DSA:3.10.20.90:FF:000047 Auxin response factor
SUPERFAMILY SSF101936 DNA-binding pseudobarrel domain
SUPERFAMILY SSF54277 CAD & PB1 domains
CDD cd10017 B3_DNA
Pfam PF02362 B3 DNA binding domain
SMART SM01019 B3_2
Gene3D G3DSA:3.10.20.90 -
Gene3D G3DSA:2.40.330.10 -
Pfam PF02309 AUX/IAA family
Coils Coil Coil
PANTHER PTHR31384 AUXIN RESPONSE FACTOR 4-RELATED
FunFam G3DSA:2.30.30.1040:FF:000001 Auxin response factor
Pfam PF06507 Auxin response factor
ProSiteProfiles PS51745 PB1 domain profile.
Gene3D G3DSA:2.30.30.1040 -
KEGG K14486 auxin response factor
MapolyID Mapoly0019s0045 -
GO GO:0005634 nucleus
GO GO:0005515 protein binding
GO GO:0009725 response to hormone
GO GO:0003677 DNA binding
GO GO:0006355 regulation of DNA-templated transcription

Nomenclature

Gene symbol Product Transcript ID Status
MpARF1 Transcription factor, similarity to Arabidopsis activator ARFs. Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g12750.1 chr1:13142226..13150268 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.