Mp1g13010



Description

Annotation

Database ID Description
FunFam G3DSA:1.10.10.60:FF:000060 MYB transcription factor
PANTHER PTHR47996 TRANSCRIPTION FACTOR DUO1
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
SUPERFAMILY SSF46689 Homeodomain-like
CDD cd00167 SANT
Gene3D G3DSA:1.10.10.60 -
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00717 sant
FunFam G3DSA:1.10.10.60:FF:000351 Transcription factor GAMYB
Pfam PF00249 Myb-like DNA-binding domain
ProSiteProfiles PS50090 Myb-like domain profile.
KOG KOG0048 Transcription factor, Myb superfamily; C-term missing; [K]
MapolyID Mapoly0019s0071 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDUO1 R2R3-myb transcription factor, ortholog of Arabidopsis thaliana DUO1 Published
MpR2R3-MYB6 transcription factor, MYB Published

Associated Literature (AI-based literature mining, Beta-version)

MpDUO1 is the transcription factor studied in this ChIP protocol on isolated antheridia; a Citrine knock-in line (MpDUO1-Citrineki) provides the fluorescent-tagged endogenous protein for immunoprecipitation, and a proMpDUO1:mCitrine-NLS line serves as negative control. ChIP-qPCR shows MpDUO1 enrichment near target gene TSSs bearing the DUO1-binding motif.

2 core 9 peripheral

Inoue K, Kotani K, Yamaoka S, Araki T. (2026) · STAR protocols  research experimental subject
MpDUO1 is the transcription factor studied in this ChIP protocol on isolated antheridia; a Citrine knock-in line (MpDUO1-Citrineki) provides the fluorescent-tagged endogenous protein for immunoprecipitation, and a proMpDUO1:mCitrine-NLS line serves as negative control. ChIP-qPCR shows MpDUO1 enrichment near target gene TSSs bearing the DUO1-binding motif.
Higo, A., et al. (2018) · Nature Communications  research experimental subject
MpDUO1 is the central R2R3-MYB transcription factor of this study, expressed in the sperm-cell lineage (spermatid mother cells) where its protein accumulates in the nucleus. Male Mpduo1 knockout plants are sterile, and complementation with wild-type MpDUO1 restores function. It directly controls downstream spermatogenesis genes including MpDAZ1.
Levins, J., et al. (2025) · New Phytologist 10.1111/nph.20454  research citation comparator
Cited as the Marchantia transcription factor promoting sperm cell differentiation; used as a reference gene tracked in Riccia genomes.
Genau, A. C., et al. (2021) · Plant Reproduction  research citation background
Cited for male gamete formation: MYB TF MpDUO1 controls the last step of spermatozoid formation in the liverwort.
Romani, F., et al. (2021) · New Phytologist  research citation background
Review: expressed in the male gametophyte controlling sperm differentiation.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g13010.1 chr1:13397454..13402569 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g13010.2 chr1:13397454..13402569 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g13010 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g13010 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.