Mp1g13740
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSiteProfiles | PS51152 | NF-YA/HAP2 family profile. |
| PRINTS | PR00616 | CCAAT-binding transcription factor subunit B signature |
| Gene3D | G3DSA:6.10.250.2430 | - |
| SMART | SM00521 | cbf3 |
| Pfam | PF02045 | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B |
| ProSitePatterns | PS00686 | NF-YA/HAP2 subunit signature. |
| PANTHER | PTHR12632 | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED |
| KEGG | K08064 | nuclear transcription factor Y, alpha |
| KOG | KOG1561 | CCAAT-binding factor, subunit B (HAP2); N-term missing; [K] |
| MapolyID | Mapoly0019s0144 | - |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II |
| GO | GO:0003700 | DNA-binding transcription factor activity |
| GO | GO:0016602 | CCAAT-binding factor complex |
| GO | GO:0003677 | DNA binding |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCCAAT-NFYA | transcription factor, CCAAT-NFYA | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g13740 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g13740.1 CAAACCACTG CTCGGGCACT GGGCTCTTCG ATACTTGTCT TGGGCCGGGC TGACTGGGGC TGGCCTGCAG TGTTTCCCTC CTCGCTCGCT CTTGTCTGCT CGTCTCGCTC TCAGGGCCTG CTTTCCTTTC CCTCTCCCCC CCAACCCTTC CCTCCCTCCC TCTCCCCTCT TCCCCTCGCC CTCCCTCCTC CCCTTTTCCC TCCCAGCCCC GCCTGCCTGC CTGCCTTCCA GCCGCGACCC CCACCACCTT TGCCCGCAGT GAGAGATTGC GTTGTGTTAT GTTGCTCTTC TTCTTGTTCG ACCCTCCGGC CCTCTCAAGG ATTTGCCTCG ACACCGCGGA GCGAGCACGC GCACAGTGGA GTGGTGTGAA TAAGGAAAGG CGCGACGCAG TGGAGTGAAG GGATGGAAGG CGAATAGGAG TAGGAGCAGA AGTAGCAGAC GAAACCCCGG GCGTCCGAGG CGACGACGAC GTTGCCGACG TCGGCGAAGA GCAGCTTAGT GTAGTGAGGA ACAGGTGGTC GGGCGTTTTG GTGAGTAAGA TCGCTGGGTG GTGCTCGCCT CGCGATCGGA GAGTGGTCGC AGGAAGTGCC TCCCCTGCTG TTTGTGTCGA TTCTTGCTTT ATAGCGGGTA GGAGATAAGG TTCCTCTGTC GCCGCAGGCA TCGGGTGCAG TGGCTGTTTG CATGCAGCTC TCTAAGCAAT TGAACCGTTG CGTCGGGTGG TGCATTTTTA ACATCGTTGT GACATCGTTC GTGTTCTGCG GTGCGTCAGG TGTACCGGGT ACCTCCGTTG GAGCTTTATC TTCCTCGACT TGCCTCGAGT TTAAACGAGG TCAATTACAA TCCAGGGAAC TTCGTAGTAG GTTTCGGCAG GCGACCTCGC TCCTCTGCCC TCTTGCCCTC TGGCCTGTCT CTCGGACGGC CACCTTCCAG AATGCTCCCA CAGCCAGGTC AGTCTCCCGC AGCATGTTCT TAGTCGCACT CGGTTCTCTT TGCTCAAGCT GGCAAGTCTA GTGGACTAAA CCCGGATTAC TTTTGTGTAG GGTTTGATAG CAGTGAAGCA GAAACTCAGC AACAAGCCCA ATCTGCAGGC ATTCCAGTCC AGGGTGAATA CATGTTGCCA CACACCCAAT TAGAGCTCGG CCACTCCATG GTACGTGGTT CCTCACCCTC GTGTTCCGTT TTGTCTTTCC CTCCTTCCCT TTCGATATCC TCATCCCGAT CGGATCCCCA CCCCCGTTCT CCCACTGAGT TTATCGAATG TTTCTTTCTG GTGTGTGCAG GCTCAGCAGG GTGGACGACA GTTTCCTTTC GCAGATCCTT ATTTCGGGGG GATAGTTGCG GCATATGGTC CTCAGGCGAT GGTCAGTACA TTCCCTTTTA CGCTTACATG TCTTCCTTTC CCATGTTTCT CGGTAATGTG TTGAAATCAA TTTTCTTGTG AACAGATCCA TCCGCATATG TTGGGGGTGC AACAAGCTCG TATGCCTTTA CCGTCGTCAG AGTTGATGGA GGAAGAACCA GTCTATGTTA ACGCAAAACA ATATCATGGT ATCTTAAGGC GCAGGCAATC GCGTGCCAAG GCGGAGTCCG AGAACAAGTT AATAAAGTCC AGGAAGGTAA TTCAAACGTT CTTTCATTTT TGTACTTTCG TTACTGGAGT CTACGGTGGA GGCGTCTTCC GTATGGTCTT ACCGTCCTAT TTATTGATGC AGCCTTATCT GCACGAGTCT CGTCATCTGC ACGCTCTGAG AAGAGCCCGC GGTTGCGGAG GAAGGTTTCT CAACACAAAA TTGAAGGAAG ATTCGAAAGG CGAGAACCAC AGATCGACTG AAGGACAATC GTCCGAAGGT ACCGATTCTC AGGCCTCTCA CTCAGGCCAG GGGCTGATAT CTGATGGAGG AATGGCACAG TATCACGCGG GAATTTTGAC CCACACTGGG CATGTGGGTA TGATTTCAGG GAATTCGTCC GGAGGTTACC ACAGTCACCA TCAGCCTCAG GGATTTCACT CGTCAGCTTT TCATCCTCTG CCTGGAGGAG GAGATGGGAA CGACAGCGCG CAAAGTTCCC AACAGACAGC CGTGGCGACT CAATGAAGCC GCGGCCCAAT GAAGTGTGGG CGAGGTGTTG GGGTGAGGTT TGGACGAGCA CCCACAAGGC ACCTTGAGAT GTAAAATGTG TTGACGTCTA GTATTGATGT CTTCTCTCAA CCTGAATTAT CATCCACTCG ATCGACAGTC AAATGTTGGG GTCTGGGCGA TGTCCTTTCG ATCATCGCCC ATCAGTTCAA TGTTTGATTC GAGTTGCAGA TAGTGTTACA GCCTTGAAAG CAGTATATGG GAGGTGTGGT CTCTCTTGGT TTAGGATTAT AGGTTCTTGC ATTTTTGTTA ACAGCAAGAG CCTATAATAG ACCAAATTCC CGATTTCAAT GAGGGCAGAG AGTCTGCAAC ATGCAGCGCA AGCACATTTC GGAGCTGAGC TGAGACGGTG TTGTAGTCTG CACCTTACTG TTCCAGATCC AGGAATGGTG TCAAATATGT GATGGAGGTT GACCCTCAGT TGGAGATGGT GGTTGTCAGG AGAGAAAAAT GTCCGAGGTC AGTTTTGAGT TAAGCCAAAG TTTTTTTTAC CTGTTTTTTT TTCCCAAAAC TTTCTTAATT TCGAAGGTTC TTTTTTCCTT TCTCCGAAAT AGTGTAGAGC TGGTAGAGTG AGGTATCCAC CTCTTGGTCG TACACCACCT GGTTCTAGAT TCAGGGACAT GACCTGTGTA GAGGTCTCTT GTACATTGGT AGAAGTAGTG TTATGTCCCT TGATGGTTTA TACACAGAAT TCAGGGAGGA GTGTCAAATT CGACTTTGGA GTAGATGTAG ACTTGTGTTG CGTTTTCTCT TCTGTACGTT TATGGAGAGG GTGAAGTGCA CCCCATGTGA GAGGCACAGG TGTTTTGAGA GGCAACGCCG TCTTTCTTTC CCTGCAAATG AGTTGTACAA AAAATGGCGA CAAGCGCCTC CTTTTTTAAT ACAGTTTCTG TAAATTTTTC TGATATACAT TGCAATCAA |
mRNA UTR + CDS |
| >Mp1g13740.1 CAAACCACTG CTCGGGCACT GGGCTCTTCG ATACTTGTCT TGGGCCGGGC TGACTGGGGC TGGCCTGCAG TGTTTCCCTC CTCGCTCGCT CTTGTCTGCT CGTCTCGCTC TCAGGGCCTG CTTTCCTTTC CCTCTCCCCC CCAACCCTTC CCTCCCTCCC TCTCCCCTCT TCCCCTCGCC CTCCCTCCTC CCCTTTTCCC TCCCAGCCCC GCCTGCCTGC CTGCCTTCCA GCCGCGACCC CCACCACCTT TGCCCGCAGT GAGAGATTGC GTTGTGTTAT GTTGCTCTTC TTCTTGTTCG ACCCTCCGGC CCTCTCAAGG ATTTGCCTCG ACACCGCGGA GCGAGCACGC GCACAGTGGA GTGGTGTGAA TAAGGAAAGG CGCGACGCAG TGGAGTGAAG GGATGGAAGG CGAATAGGAG TAGGAGCAGA AGTAGCAGAC GAAACCCCGG GCGTCCGAGG CGACGACGAC GTTGCCGACG TCGGCGAAGA GCAGCTTAGT GTAGTGAGGA ACAGGTGGTC GGGCGTTTTG GTGTACCGGG TACCTCCGTT GGAGCTTTAT CTTCCTCGAC TTGCCTCGAG TTTAAACGAG GTCAATTACA ATCCAGGGAA CTTCGTAGTA GGTTTCGGCA GGCGACCTCG CTCCTCTGCC CTCTTGCCCT CTGGCCTGTC TCTCGGACGG CCACCTTCCA GAATGCTCCC ACAGCCAGGG TTTGATAGCA GTGAAGCAGA AACTCAGCAA CAAGCCCAAT CTGCAGGCAT TCCAGTCCAG GGTGAATACA TGTTGCCACA CACCCAATTA GAGCTCGGCC ACTCCATGGC TCAGCAGGGT GGACGACAGT TTCCTTTCGC AGATCCTTAT TTCGGGGGGA TAGTTGCGGC ATATGGTCCT CAGGCGATGA TCCATCCGCA TATGTTGGGG GTGCAACAAG CTCGTATGCC TTTACCGTCG TCAGAGTTGA TGGAGGAAGA ACCAGTCTAT GTTAACGCAA AACAATATCA TGGTATCTTA AGGCGCAGGC AATCGCGTGC CAAGGCGGAG TCCGAGAACA AGTTAATAAA GTCCAGGAAG CCTTATCTGC ACGAGTCTCG TCATCTGCAC GCTCTGAGAA GAGCCCGCGG TTGCGGAGGA AGGTTTCTCA ACACAAAATT GAAGGAAGAT TCGAAAGGCG AGAACCACAG ATCGACTGAA GGACAATCGT CCGAAGGGAA TTCGTCCGGA GGTTACCACA GTCACCATCA GCCTCAGGGA TTTCACTCGT CAGCTTTTCA TCCTCTGCCT GGAGGAGGAG ATGGGAACGA CAGCGCGCAA AGTTCCCAAC AGACAGCCGT GGCGACTCAA TGAAGCCGCG GCCCAATGAA GTGTGGGCGA GGTGTTGGGG TGAGGTTTGG ACGAGCACCC ACAAGGCACC TTGAGATGTA AAATGTGTTG ACGTCTAGTA TTGATGTCTT CTCTCAACCT GAATTATCAT CCACTCGATC GACAGTCAAA TGTTGGGGTC TGGGCGATGT CCTTTCGATC ATCGCCCATC AGTTCAATGT TTGATTCGAG TTGCAGATAG TGTTACAGCC TTGAAAGCAG TATATGGGAG GTGTGGTCTC TCTTGGTTTA GGATTATAGG TTCTTGCATT TTTGTTAACA GCAAGAGCCT ATAATAGACC AAATTCCCGA TTTCAATGAG GGCAGAGAGT CTGCAACATG CAGCGCAAGC ACATTTCGGA GCTGAGCTGA GACGGTGTTG TAGTCTGCAC CTTACTGTTC CAGATCCAGG AATGGTGTCA AATATGTGAT GGAGGTTGAC CCTCAGTTGG AGATGGTGGT TGTCAGGAGA GAAAAATGTC CGAGGTCAGT TTTGAGTTAA GCCAAAGTTT TTTTTACCTG TTTTTTTTTC CCAAAACTTT CTTAATTTCG AAGGTTCTTT TTTCCTTTCT CCGAAATAGT GTAGAGCTGG TAGAGTGAGG TATCCACCTC TTGGTCGTAC ACCACCTGGT TCTAGATTCA GGGACATGAC CTGTGTAGAG GTCTCTTGTA CATTGGTAGA AGTAGTGTTA TGTCCCTTGA TGGTTTATAC ACAGAATTCA GGGAGGAGTG TCAAATTCGA CTTTGGAGTA GATGTAGACT TGTGTTGCGT TTTCTCTTCT GTACGTTTAT GGAGAGGGTG AAGTGCACCC CATGTGAGAG GCACAGGTGT TTTGAGAGGC AACGCCGTCT TTCTTTCCCT GCAAATGAGT TGTACAAAAA ATGGCGACAA GCGCCTCCTT TTTTAATACA GTTTCTGTAA ATTTTTCTGA TATACATTGC AATCAA |
CDS |
| >Mp1g13740.1 ATGCTCCCAC AGCCAGGGTT TGATAGCAGT GAAGCAGAAA CTCAGCAACA AGCCCAATCT GCAGGCATTC CAGTCCAGGG TGAATACATG TTGCCACACA CCCAATTAGA GCTCGGCCAC TCCATGGCTC AGCAGGGTGG ACGACAGTTT CCTTTCGCAG ATCCTTATTT CGGGGGGATA GTTGCGGCAT ATGGTCCTCA GGCGATGATC CATCCGCATA TGTTGGGGGT GCAACAAGCT CGTATGCCTT TACCGTCGTC AGAGTTGATG GAGGAAGAAC CAGTCTATGT TAACGCAAAA CAATATCATG GTATCTTAAG GCGCAGGCAA TCGCGTGCCA AGGCGGAGTC CGAGAACAAG TTAATAAAGT CCAGGAAGCC TTATCTGCAC GAGTCTCGTC ATCTGCACGC TCTGAGAAGA GCCCGCGGTT GCGGAGGAAG GTTTCTCAAC ACAAAATTGA AGGAAGATTC GAAAGGCGAG AACCACAGAT CGACTGAAGG ACAATCGTCC GAAGGGAATT CGTCCGGAGG TTACCACAGT CACCATCAGC CTCAGGGATT TCACTCGTCA GCTTTTCATC CTCTGCCTGG AGGAGGAGAT GGGAACGACA GCGCGCAAAG TTCCCAACAG ACAGCCGTGG CGACTCAATG A |
Protein |
| >Mp1g13740.1 MLPQPGFDSS EAETQQQAQS AGIPVQGEYM LPHTQLELGH SMAQQGGRQF PFADPYFGGI VAAYGPQAMI HPHMLGVQQA RMPLPSSELM EEEPVYVNAK QYHGILRRRQ SRAKAESENK LIKSRKPYLH ESRHLHALRR ARGCGGRFLN TKLKEDSKGE NHRSTEGQSS EGNSSGGYHS HHQPQGFHSS AFHPLPGGGD GNDSAQSSQQ TAVATQ |