Mp1g15430



Description

Annotation

Database ID Description
NCBIfam TIGR01364 phosphoserine transaminase
SUPERFAMILY SSF53383 PLP-dependent transferases
Gene3D G3DSA:3.40.640.10 -
CDD cd00611 PSAT_like
PANTHER PTHR43247 PHOSPHOSERINE AMINOTRANSFERASE
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1
FunFam G3DSA:3.40.640.10:FF:000010 Phosphoserine aminotransferase
Hamap MF_00160 Phosphoserine aminotransferase [serC].
FunFam G3DSA:3.90.1150.10:FF:000006 Phosphoserine aminotransferase
Pfam PF00266 Aminotransferase class-V
KEGG K00831 phosphoserine aminotransferase [EC:2.6.1.52]
KOG KOG2790 Phosphoserine aminotransferase; [HE]
MapolyID Mapoly0033s0118 -
GO GO:0009570 chloroplast stroma
GO GO:0004648 O-phospho-L-serine:2-oxoglutarate aminotransferase activity
GO GO:0005737 cytoplasm
GO GO:0030170 pyridoxal phosphate binding
GO GO:0006564 L-serine biosynthetic process

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

3-phosphoserine aminotransferase, second enzyme of the phosphorylated pathway. Its expression together with MpPGDH was significantly induced 8 and 16 h after transfer to darkness, supporting activation of the pathway under dark conditions.

1 core 1 peripheral

Wang, M., et al. (2024a) · Communications Biology  research experimental subject
3-phosphoserine aminotransferase, second enzyme of the phosphorylated pathway. Its expression together with MpPGDH was significantly induced 8 and 16 h after transfer to darkness, supporting activation of the pathway under dark conditions.
Akashi, H., et al. (2018) · Frontiers in Plant Science  research sequence background
Phosphoserine aminotransferase identified as a single-copy gene by BLAST, deduced protein 67% identical to AtPSAT1; not functionally or biochemically tested.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g15430.1 chr1:16151166..16153135 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g15430 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g15430 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.