Mp1g17090
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF12638 | Staygreen protein |
| PANTHER | PTHR31750 | PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED |
| KEGG | K22013 | magnesium dechelatase [EC:4.99.1.10] |
| MapolyID | Mapoly0001s0049 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Senescence marker gene induced upon TMV infection.
0 core 2 peripheral
Kulshrestha, S., et al. (2022)
· Journal of Experimental Botany review citation background
NON-YELLOWING1/SGR; senescence
Ros-Moner, E., et al. (2024)
· Nature Communications research experimental background
Senescence marker gene induced upon TMV infection.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g17090 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g17090.1 GAGAACTGCC ACAACGAGAC CGCTCTCTAC TTCGGAGACT ACCGACCAAG TTGCATGCCC GGTCTCTCTA AATTTCCCTC TCAGATCTCC CTTCGCCTCC CCTATCCTGA TTTGGATCGC GCCTGGAGTT ATTGCGAGTC AAACGTTGTC TTAAGTGTAG GCCGGCGCAC CAGAGGCACG AGCAGCTTGT GTTGCCTCTC CGGGCTGCGA AAGCTGATGT GACAGCGGGG GGTTTCTCCA ACGAGATGTA CAAGACTCGT GGAATTGGAA ATTGAGGGCG AATCAGAACA ACTTGCAGAC GCGAGTCTGT CCTCGAGAGC CAACTCAAGC ATCAGAAGGC GGCCTCATCA TTCTCCTTGC AAGTTCCAAG GGCTGCGCTC AGCGAGTTTT CTGCTCGTGT TCTGGCAGTG CTTTACCCAG TCAAAACAAA GCAAGATTCT CTCGTCATAG GAAGAGCTCC GGGTCCGCAC TCGATCTTCT TCGTTATCGG AGTCGACGGA TGCATGCGTG CGTGCCCGAA GTTGCTGGAC TCGAGGGGTT ACTAAATTGG TCCTGAAGTT CCTTCCTGCA GGAGTGGAGC AGAGAAAGCA TCCGGAATTC TTGTTTTATG CATGCTTTGC TGCGATCGAC GTTCATTTAT ATTTCGTTCT GGCCCGTCGG TTTTTCTGCC TGAATACTTG ACAGATCTCA TAACCAAGCC TATGGAACCT GAACTACAAT TTCTTGGCTG CGGCGAATGA TGAACTCTTC TCCAAATTTC GGCTCCAAAG CTCATGTGCA GAACCGGACT CCAGATTGTG CCTCCACGAA TTCTCACGAC TGTACTAGAA CCCGACAGAG ATACAGCGAG AATAGCTGTG GTGGTCTCCA CGTACAGCCC CCTGAATGAA CGTCAGTCGA GTCTGATTGC TGAGGATCTG TGCATACAAC ACCGGCGTAC ACACTTTCAT TTAGCGACTG ATAAAGCTTT GTGATGGCAG CCGCCGCCTG CGCATGCATC ACTGCAGGCT TGGCCACGTC ATTAAGCCCT GCAAACTCGA AAGAGAAATG GGATAGTCTT CAGGCCATTT GTTCAGTCTC TCCTGCCGCA CGCCGGAGCA CGACACCACT CCCCCGGGCT CAGAACGCCT CAGTGTCTCG TTCGTCAGGG GAAAACTACT CGAGCTTTTG GGGCAAAGAA AGCTGCGGCA CCCTTCTTGG TCGGAATCAG GCACAACAAA GCCTTGCTGC GTGTTCATTC AGATCCGTCC CTCTTGTGGT AAGTCCGAGT AGGTTCGAAT TGGTGAGAAA TTGAAGTGAT GGGGACTATA GCTGTCAAAA TTTTTGAAAG TTGACGTCTC CAAATCCGTA ATCACAACGA AGCTCATGGG GACTGAATGA CATTGGCTTT CAGGAATCAA GACTTTTCGG GCCGGCAATT TTTGAAGCAT CAAAACTACG TGTGCTCTTT CTTGGAAAAG AGGATGACAA GGGCCACCTG CAACAGCCTC GAATTTACAC TCTAACTCAC AGTGACGTCA CTGCCAAAAT CACTCTGGCT GTCGCTCAAG AGATCAACAA AGCGCAGGTT GGTTTACTTA CACTACTGTA TCTGGAATCA AGTATCTGTC TGGTGTCTTA TAGTTCCTAG TCATATCCAA GAATCAGACA CCAACTTTGA TAGTGCAGCA ACGACGAGGG TAGAAAGTAG AGTGTTCGCA TGTCAATCGA AAACTTCTGA TGTGCTCAAG CAATTGTCCT GGTTTGTTTT GTCTAGTTGA TGGGCTGGTA TAGTCAGCTG CAACGGGATG AGGTGTTGGC GGAATGGAGG AGGACAAAGG GGGAAATGAC TCTTCATGTA CACTGTCATA TAAGTGGGGG CAACTGGCTT CATGACATCA TAGCCAAGCT CCGATTTTAC ATCTTTCGGA AGGAGCTACC GGTGGTAAGC TTCAATCAAA CCAACTCACT ATAGGTCGAT ATGGTTCATG TCTTGGATCG ATCTGATCTT GCTTCTTGTT GTATTTGCTA CTTTAACGTT ACGTGACGAG GTACTAAGTC TACTCTAGTT TAAACTTAAC GCTTCTGATC ATCAAAGGTT TACTTTTCTC ATGCAGGTTC TGGAGGCTTT CATGCATGGG GACAGAGATC TATTTTCGAA ACATCCAGAG CTACAAAGTG CACCTGTTTG GGTGTATTTC CATTCGAATA TGGAAGAGTA CAACCGCATG GAATTCTGGG GACCTCTATC TGAGGCTACT AAGGTACTGA TAAGTTCCTT CTCTCAAAGT CAAAGAGAGT AGTCACTGAA TTCAAGATAT GAAATAGCAT GATAAGCTTA GATCGACGTT ACCACTTCAA CCAACATTCT GACGTCTCAT TTTCTTGGTA TTTCAGGGAG CATCAGAACT ACAAAAGGAA GCAATACACC AAGCTCTGGA CGAGATAGTG AAGAATGAGA AGAAGCAGCA ATTTCCCAAG CCCACATGCT CCGTTCAGTG TGAATGCTGT TCTCGTCACG CAGCTGTGAT CCCAATCCCC GAGTCCTTTA GAATGCATGC ACGATCTCAC GAGCACAGAG AGCGTGGCGT CCCTCAATGA GATGTTCTTA CAGTAGCAGT TTTACGGATT TGACGACTTT TCTAGCGAGT TCTTGTCGGA TGATCATCGG TCAAGGGAGT AAGTATATAG TGGAGGACAA TCGAGGACGT GCCTTCAGCA GTTCCAAACA CTTTTGGGCA GCACATGCCG AGTCCAGCTC CGAATGTCTT ACAGTAAACT CATGTCCAGA TTGTAAAGGA GGAATGAAAC CAGGAAAGGA CAGAAGGATT TTTCCGGGCA GGCAGTCAGT TGCAAGGCAC TGCCGCAGTT CCATCTGGAA GACGTGGAGA CGACGAGGCA TGAAATTATT GATGATGCGG CAAGAACCGT GTTCAGTACA TTGTAGAATA GCGACTGGCT AAACATAGTT CATGTTAACA TTGATGTATA TATCCGTCAT GAATCATTCT TGTTATTCTC GAATAGTACG GTACATTTAG TTAGTTTGTA GTTACCTTCA GAATAACACC TCGCTGGAGG TAGTTTTTTC AATAGATGTA GATAGTTATG TAGATTCTGA GGGACCTCAT CGACGGTCCG AGACCTAGAT AGTCAGTGAC TTTTTGGCTC CATTGGCCAG CACAAAATTC GTCGACACGA TGTGTACATT CTACATATTT CTAATCAGCT ATTACATATT TTTATATGAA AATTTTTTGT TAATGCTACG GCGGAACAGT TGTTAAGCGG GCTATTAGCC AGCTAAAAGG GAAGTGTCAA AAAGTGATCC AGTTCTTGCG ATATATCAAC AGGAGAGAAG AGTCTTTGGG CGAGTGTCAT GTGTGCTTGC TCCGCCGCAG ATTGGAGGAG GCAAACCACG GGCAGGTGGC AAAATGCGGG CAGGTTGAAA CCCCCGTGTC CTGATGGGGG CCCCAGAGCA AATGCAATTT GAAGGTGTGA CGAGTACGTT TCAAGGCGAA GACGGTGAGG TGATTACGAT AGGCTTAGAC AGAACATGAT GTCGTCTTCG TGAAGAAATC AATCCGGCTT AAGTAGAGGC TG |
mRNA UTR + CDS |
| >Mp1g17090.1 GAGAACTGCC ACAACGAGAC CGCTCTCTAC TTCGGAGACT ACCGACCAAG TTGCATGCCC GGTCTCTCTA AATTTCCCTC TCAGATCTCC CTTCGCCTCC CCTATCCTGA TTTGGATCGC GCCTGGAGTT ATTGCGAGTC AAACGTTGTC TTAAGTGTAG GCCGGCGCAC CAGAGGCACG AGCAGCTTGT GTTGCCTCTC CGGGCTGCGA AAGCTGATGT GACAGCGGGG GGTTTCTCCA ACGAGATGTA CAAGACTCGT GGAATTGGAA ATTGAGGGCG AATCAGAACA ACTTGCAGAC GCGAGTCTGT CCTCGAGAGC CAACTCAAGC ATCAGAAGGC GGCCTCATCA TTCTCCTTGC AAGTTCCAAG GGCTGCGCTC AGCGAGTTTT CTGCTCGTGT TCTGGCAGTG CTTTACCCAG TCAAAACAAA GCAAGATTCT CTCGTCATAG GAAGAGCTCC GGGTCCGCAC TCGATCTTCT TCGTTATCGG AGTCGACGGA TGCATGCGTG CGTGCCCGAA GTTGCTGGAC TCGAGGGGTT ACTAAATTGG TCCTGAAGTT CCTTCCTGCA GGAGTGGAGC AGAGAAAGCA TCCGGAATTC TTGTTTTATG CATGCTTTGC TGCGATCGAC GTTCATTTAT ATTTCGTTCT GGCCCGTCGG TTTTTCTGCC TGAATACTTG ACAGATCTCA TAACCAAGCC TATGGAACCT GAACTACAAT TTCTTGGCTG CGGCGAATGA TGAACTCTTC TCCAAATTTC GGCTCCAAAG CTCATGTGCA GAACCGGACT CCAGATTGTG CCTCCACGAA TTCTCACGAC TGTACTAGAA CCCGACAGAG ATACAGCGAG AATAGCTGTG GTGGTCTCCA CGTACAGCCC CCTGAATGAA CGTCAGTCGA GTCTGATTGC TGAGGATCTG TGCATACAAC ACCGGCGTAC ACACTTTCAT TTAGCGACTG ATAAAGCTTT GTGATGGCAG CCGCCGCCTG CGCATGCATC ACTGCAGGCT TGGCCACGTC ATTAAGCCCT GCAAACTCGA AAGAGAAATG GGATAGTCTT CAGGCCATTT GTTCAGTCTC TCCTGCCGCA CGCCGGAGCA CGACACCACT CCCCCGGGCT CAGAACGCCT CAGTGTCTCG TTCGTCAGGG GAAAACTACT CGAGCTTTTG GGGCAAAGAA AGCTGCGGCA CCCTTCTTGG TCGGAATCAG GCACAACAAA GCCTTGCTGC GTGTTCATTC AGATCCGTCC CTCTTGTGGA ATCAAGACTT TTCGGGCCGG CAATTTTTGA AGCATCAAAA CTACGTGTGC TCTTTCTTGG AAAAGAGGAT GACAAGGGCC ACCTGCAACA GCCTCGAATT TACACTCTAA CTCACAGTGA CGTCACTGCC AAAATCACTC TGGCTGTCGC TCAAGAGATC AACAAAGCGC AGTTGATGGG CTGGTATAGT CAGCTGCAAC GGGATGAGGT GTTGGCGGAA TGGAGGAGGA CAAAGGGGGA AATGACTCTT CATGTACACT GTCATATAAG TGGGGGCAAC TGGCTTCATG ACATCATAGC CAAGCTCCGA TTTTACATCT TTCGGAAGGA GCTACCGGTG GTTCTGGAGG CTTTCATGCA TGGGGACAGA GATCTATTTT CGAAACATCC AGAGCTACAA AGTGCACCTG TTTGGGTGTA TTTCCATTCG AATATGGAAG AGTACAACCG CATGGAATTC TGGGGACCTC TATCTGAGGC TACTAAGGGA GCATCAGAAC TACAAAAGGA AGCAATACAC CAAGCTCTGG ACGAGATAGT GAAGAATGAG AAGAAGCAGC AATTTCCCAA GCCCACATGC TCCGTTCAGT GTGAATGCTG TTCTCGTCAC GCAGCTGTGA TCCCAATCCC CGAGTCCTTT AGAATGCATG CACGATCTCA CGAGCACAGA GAGCGTGGCG TCCCTCAATG AGATGTTCTT ACAGTAGCAG TTTTACGGAT TTGACGACTT TTCTAGCGAG TTCTTGTCGG ATGATCATCG GTCAAGGGAG TAAGTATATA GTGGAGGACA ATCGAGGACG TGCCTTCAGC AGTTCCAAAC ACTTTTGGGC AGCACATGCC GAGTCCAGCT CCGAATGTCT TACAGTAAAC TCATGTCCAG ATTGTAAAGG AGGAATGAAA CCAGGAAAGG ACAGAAGGAT TTTTCCGGGC AGGCAGTCAG TTGCAAGGCA CTGCCGCAGT TCCATCTGGA AGACGTGGAG ACGACGAGGC ATGAAATTAT TGATGATGCG GCAAGAACCG TGTTCAGTAC ATTGTAGAAT AGCGACTGGC TAAACATAGT TCATGTTAAC ATTGATGTAT ATATCCGTCA TGAATCATTC TTGTTATTCT CGAATAGTAC GGTACATTTA GTTAGTTTGT AGTTACCTTC AGAATAACAC CTCGCTGGAG GTAGTTTTTT CAATAGATGT AGATAGTTAT GTAGATTCTG AGGGACCTCA TCGACGGTCC GAGACCTAGA TAGTCAGTGA CTTTTTGGCT CCATTGGCCA GCACAAAATT CGTCGACACG ATGTGTACAT TCTACATATT TCTAATCAGC TATTACATAT TTTTATATGA AAATTTTTTG TTAATGCTAC GGCGGAACAG TTGTTAAGCG GGCTATTAGC CAGCTAAAAG GGAAGTGTCA AAAAGTGATC CAGTTCTTGC GATATATCAA CAGGAGAGAA GAGTCTTTGG GCGAGTGTCA TGTGTGCTTG CTCCGCCGCA GATTGGAGGA GGCAAACCAC GGGCAGGTGG CAAAATGCGG GCAGGTTGAA ACCCCCGTGT CCTGATGGGG GCCCCAGAGC AAATGCAATT TGAAGGTGTG ACGAGTACGT TTCAAGGCGA AGACGGTGAG GTGATTACGA TAGGCTTAGA CAGAACATGA TGTCGTCTTC GTGAAGAAAT CAATCCGGCT TAAGTAGAGG CTG |
CDS |
| >Mp1g17090.1 ATGGCAGCCG CCGCCTGCGC ATGCATCACT GCAGGCTTGG CCACGTCATT AAGCCCTGCA AACTCGAAAG AGAAATGGGA TAGTCTTCAG GCCATTTGTT CAGTCTCTCC TGCCGCACGC CGGAGCACGA CACCACTCCC CCGGGCTCAG AACGCCTCAG TGTCTCGTTC GTCAGGGGAA AACTACTCGA GCTTTTGGGG CAAAGAAAGC TGCGGCACCC TTCTTGGTCG GAATCAGGCA CAACAAAGCC TTGCTGCGTG TTCATTCAGA TCCGTCCCTC TTGTGGAATC AAGACTTTTC GGGCCGGCAA TTTTTGAAGC ATCAAAACTA CGTGTGCTCT TTCTTGGAAA AGAGGATGAC AAGGGCCACC TGCAACAGCC TCGAATTTAC ACTCTAACTC ACAGTGACGT CACTGCCAAA ATCACTCTGG CTGTCGCTCA AGAGATCAAC AAAGCGCAGT TGATGGGCTG GTATAGTCAG CTGCAACGGG ATGAGGTGTT GGCGGAATGG AGGAGGACAA AGGGGGAAAT GACTCTTCAT GTACACTGTC ATATAAGTGG GGGCAACTGG CTTCATGACA TCATAGCCAA GCTCCGATTT TACATCTTTC GGAAGGAGCT ACCGGTGGTT CTGGAGGCTT TCATGCATGG GGACAGAGAT CTATTTTCGA AACATCCAGA GCTACAAAGT GCACCTGTTT GGGTGTATTT CCATTCGAAT ATGGAAGAGT ACAACCGCAT GGAATTCTGG GGACCTCTAT CTGAGGCTAC TAAGGGAGCA TCAGAACTAC AAAAGGAAGC AATACACCAA GCTCTGGACG AGATAGTGAA GAATGAGAAG AAGCAGCAAT TTCCCAAGCC CACATGCTCC GTTCAGTGTG AATGCTGTTC TCGTCACGCA GCTGTGATCC CAATCCCCGA GTCCTTTAGA ATGCATGCAC GATCTCACGA GCACAGAGAG CGTGGCGTCC CTCAATGA |
Protein |
| >Mp1g17090.1 MAAAACACIT AGLATSLSPA NSKEKWDSLQ AICSVSPAAR RSTTPLPRAQ NASVSRSSGE NYSSFWGKES CGTLLGRNQA QQSLAACSFR SVPLVESRLF GPAIFEASKL RVLFLGKEDD KGHLQQPRIY TLTHSDVTAK ITLAVAQEIN KAQLMGWYSQ LQRDEVLAEW RRTKGEMTLH VHCHISGGNW LHDIIAKLRF YIFRKELPVV LEAFMHGDRD LFSKHPELQS APVWVYFHSN MEEYNRMEFW GPLSEATKGA SELQKEAIHQ ALDEIVKNEK KQQFPKPTCS VQCECCSRHA AVIPIPESFR MHARSHEHRE RGVPQ |