Mp1g17830



Description

Annotation

Database ID Description
CDD cd11064 CYP86A
PRINTS PR00385 P450 superfamily signature
PANTHER PTHR24296 CYTOCHROME P450
Gene3D G3DSA:1.10.630.10 Cytochrome P450
Pfam PF00067 Cytochrome P450
SUPERFAMILY SSF48264 Cytochrome P450
PRINTS PR00465 E-class P450 group IV signature
KOG KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [QI]
MapolyID Mapoly0001s0122 -
GO GO:0005506 iron ion binding
GO GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO GO:0004497 monooxygenase activity
GO GO:0020037 heme binding

Nomenclature

Gene symbol Product Transcript ID Status
MpCYP704-like2 Cytochrome P450, Secondary metabolism enzyme Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17830.1 chr1:18638006..18642149 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g17830 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g17830 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.