Mp1g18540
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR31089 | CYCLIC DOF FACTOR 2 |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSitePatterns | PS01361 | Zinc finger Dof-type signature. |
| Pfam | PF02701 | Dof domain, zinc finger |
| ProSiteProfiles | PS50884 | Zinc finger Dof-type profile. |
| MapolyID | Mapoly0001s0192 | - |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0003700 | DNA-binding transcription factor activity |
| GO | GO:0003677 | DNA binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCDF | transcription factor, Dof | Published |
Associated Literature (AI-based literature mining, Beta-version)
transcription factor, Dof (from nomenclature)
0 core 1 peripheral
Kanesaka, Y., et al. (2023)
· Frontiers in Plant Science research sequence comparator
Noted as the single-copy M. polymorpha ortholog/counterpart of Arabidopsis CDF in a sequence comparison.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g18540 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g18540.1 CCTTCCTTGA TGAGAGTGAA GCTCTTCGTC TCGTGTGCCT CTCGTCTCCG CTGCCTGCTT GTCGGACTGG CTGGCGTGCT TGGCTGGGCT GGCCTGGTGT CTGCGGCCGA CCATCAACGA CGACGTCTCG ACATGAGGCT CTCTTGAAGC GCCGAGAGCT GGTTTCGCTG TGAGCTTGTG GCTGTGTGTG CGTGTGTGTG AGCGAGCGAG TGTGTGATTG ACTCTTGTGC GTGGCAGCGC TCTCTGTCGA CAGGTCGAGG CCGAGCGCAG TTCGCTTCTA CTATTCACCT CCTGTGCTCT TTCATGGGCG GAGGAGCGAG CGAAGTTGCG AGCGTGACGG GCGAAGAAGA AGCGCTAGGA AGCAGGGACA GACTTTGCCA TCAACGAGTG CTGTGTGTGC GATAGGAAGG GAAGGGCCGA TTTCGGTAGG TAATGTGCTT CGCGAGTAAG CTGGATCTGG TGGATTGGAG GAGGCGCCCG CTGGTAGACG ATAGGTAATT GACAGACAGA CAGACAGACA GGTTGCAATC TTGACAGGTC CGTTGCTGTG GAGAGTCCGT GGGAAGGTGC CGGTGGGTGG TGGTAATAAG GGGCGTGGAG GGCAAGGTGG TATGGAAGAA GTGTTCTGGT CAGGAAACAG GGTGAAGAGA AAGGACGATA TATCAGCGAT CTGTTGAAGA AGTTCTAGCT GTAGAAAAAG AAAGGCCGAG TTTAGGGAGC GCGATTCCCT GAGGAATAGT TTTCTGGGTA AAGATCTGCG ACGGAGGCTG AAGGCTGGGT CAGGACGTGG GACGGCACGA AATGGCATGT GCTTGAGGAT ATGGATTGCC GTCGAAGCTC AAGAATTTCA GTATGATGGA TTCACCGATC AAGTTGTTCG GGAAAACAAT TGCTAAAGCT GCCGCTTCCG CATTCACAAC ATCATCAGGT GAAGCAGACG ACGCTGAAGC AGTCCCGACT ACGAGCAGTG GGGGCTGGGT TGATTTGCCA TCGTCGTCGC AGGTGTGTAC TTCCCTTCCA GCTCTTTGAA TGTATGCAAG CTGATCTTGC CTACCTGACG AGCATTCGAG CAGCCCTTCG TCGCTCGTCA CAGATGCGTT TCCGTGTCTT TTGCATAGCC ACTCCTCAGG AGGGCTCAGG CTCCGCGCCT GCGTGTTTCA ATCGATGCCT GCGTGAGTGT TTTGTGCGCT TTATGAATTG GTTCAATCGC CGTATAGGAT AGGATAGTAT AGGATGCGAT ATGCTTTCTT TCCATGGAGG GGTGGCTCGC CGAGCACGTC GGCAGCCGGT GGCGAAGTCG CTAGTCCGTC TCAATGTCGC CTGCGCCAGA GCAGAGCATC GCGGGCCGTC GGGACTGACG TGGGCGGGCG TGCAATTTCT GTCTGGGATG TGCAGGATGT GAAGGAAAAT GGAGCGGAAA GCAGCAGACT GGGGGAGATC AATGGAGGCG GGGTGACGTT CACGAGGCAG GAGGTGAAAC GAGGATCGTC GCCCGACCGG ACGTCGTCGG CGTGCAACAG CGCGGAGGAG GAGAAGCTGT GCGCGTCGCC GCGAGGCGGA GGCGGGGCCA CGGGGGGAGC AGGAGCAGAG CTGACGCCCT CGGCCTCGGG GGGCGAGGCG GGCGCGGGCG ACGACGAGGG CAGCGAGGAG GAGGATGGAT CGGGCATGAA TGGGCGCAGT AAAAAGGATG GCGGCGACGA TGGCGGCAAG GGAGGGGAGA AGATGCCCCG ACGGCCCGAG AATGCTGTTG CGTGTCCTCG ATGCCATAGT TTTGAGACGA AGTTTTGTTA CTACAACAAT TACAACGTCA ATCAGCCCCG GCACTTCTGC AAGCACTGCC AGCGCTACTG GACCGCGGGC GGCACGCTGC GCAACGTGCC GGTGGGCGCC GGGCGGCGCA AGAACAAGCA CGGCAGCACC ATCGCGCCGC GCGGCCAGAC GCCCGAGGTC GGCACCGTGC GCAGCGACGC GCCCGACATC GCCTCGCCGC TCATCGCGTC CAAGGGCGGC GTCGGGCCCG TGCCCGTGCA GGTCGCGGTC GTGCAGGCCG CGGGCAGCAA GGGCGGGATT GTGCGCATGG CCGTGCCTGC GGCCAGCGGC GACCCCTCGG TTCTGCCGTT TCTGCGAATG CAGCCCTCGC CGATGGACAC CGCCTCCATC TTCATGGCCT CGTCCGATGC CGGCACCTCG AGCGACACGG TCACCGTGGC CTGCAAGCGC GGCCGGCTGG CCACTCCCGG GTTCAGCGAC GCATCCACAG GTGCCAACGA CATGGAGCAG CAGCAGCAGC AGCAGCAGCA GCCGTCTTGG GGGCAGCAGT CGTCGACGAA TGATGAATCC GCCTGCTCGC CCCTCACGTC GGCGAATGGC AATGTTGTGG TGCATGAGAT TAAGGGCGAA CCCGGGTCAG CGTGTCAGAT GATGGGTGTG GCAGCGGTAT CAGGAGTGGG GGGGCCCGAG CAGCAGCAGC AGCAGCAGCA ACAACAGCAA CAGCAGCAGC AGCAGCAGCA GCATCCTGCG ACGAACAACG GCATGGCCGG TCCAGGGGGT TGTTGGTCTG CTGCCGGTCC GCAATCGAGC GTACCTCCGC CCGGGGCCGC GGGAGCCCCT TACGGATTCT ATAACGGAGG ATGGCCGTAT GGGTACAACG TGGGCTGGAG CGGGCCTCCT GCATTCTGCG CCGGGGGAGT TGCCACTGCG GGCACGGGCA TGCCGGGCCC TCCCCCGCCG GGCAACATCG CTGCGTGGAA TGGAGCCGGG GGCAGCGTCT GGACCGGGGT TCCTTGGCCC ATGCCGGGCC TGGCTTGGGG CCCCCCCTGG GCTATGGCGC CGTGGGCCAT GAGTGCGGGT CACGGTGGGG CTAGCATGGG GAGCATTACG CAGACGATTT CGATGAGCTC CGGTGCTGCT GCTGGCATGG TCACTGTGCC GGTGCCCTGC AGTACGACTG CCAGTGGTGG TGGTCCTGCG TCCGCTGCGC CCCCGTCATC GCCCTCATCA TCACTGGGCA AGCATTCGCG CGGGGGGCCG CCGGTGGGGG CCCCTGCATC GTCTGCCGCA GCAGCTGCTG CTTGCAATGG CGCAGGAGGA GCAGGTGGGG GAGGAGGAGG CGGCGGAGGA GGCCGCATGG AGGGAGGCCT GTGGGCGCCC AAATCGCTGC GAATGGCTGA TCCTGAGGAG GCAATGCGAA GTTCGGTTTG GAGGATACTG GGAGTCGGTT CCCGAGCCGA CATGACGACG GCCAGCACAT TTAAAGCGTT CCAGCCTAGA AACGAGAGTA AGAAGATTTC CGATGATGAT CAACAAGCAG TGCAAGCGTC GTTGCATGCG AACCCTGCAG CGATGTCTCG TTCCATGAAT TTCCACGAGA GTAACTAGTA CGGTCGCAAA TTGAAACAGC AGATCATGAG CCAGCCACAC AATTTTATAA GTTCCGATGA AAGAAACCAG CTTAGTAGAA CGTAATTCAT TCAGTGCAGG TTTAAGACCC AGATCCCAGT ATTCTGGGTT CGAGGAGCAT GCTTATCTGA TTGCGCTTCC GGGATTGTAG ATTCTCCGTG CTTGTGTGAA TAGACCAGTT TTGACTCCCT TGGGTTTCTG CCCAAGTTGT GGGGGCATTA TATTCACAAG AAATATTTGA CAATGTA |
mRNA UTR + CDS |
| >Mp1g18540.1 CCTTCCTTGA TGAGAGTGAA GCTCTTCGTC TCGTGTGCCT CTCGTCTCCG CTGCCTGCTT GTCGGACTGG CTGGCGTGCT TGGCTGGGCT GGCCTGGTGT CTGCGGCCGA CCATCAACGA CGACGTCTCG ACATGAGGCT CTCTTGAAGC GCCGAGAGCT GGTTTCGCTG TGAGCTTGTG GCTGTGTGTG CGTGTGTGTG AGCGAGCGAG TGTGTGATTG ACTCTTGTGC GTGGCAGCGC TCTCTGTCGA CAGGTCGAGG CCGAGCGCAG TTCGCTTCTA CTATTCACCT CCTGTGCTCT TTCATGGGCG GAGGAGCGAG CGAAGTTGCG AGCGTGACGG GCGAAGAAGA AGCGCTAGGA AGCAGGGACA GACTTTGCCA TCAACGAGTG CTGTGTGTGC GATAGGAAGG GAAGGGCCGA TTTCGGTAGG TAATGTGCTT CGCGAGTAAG CTGGATCTGG TGGATTGGAG GAGGCGCCCG CTGGTAGACG ATAGGTAATT GACAGACAGA CAGACAGACA GGTTGCAATC TTGACAGGTC CGTTGCTGTG GAGAGTCCGT GGGAAGGTGC CGGTGGGTGG TGGTAATAAG GGGCGTGGAG GGCAAGGTGG TATGGAAGAA GTGTTCTGGT CAGGAAACAG GGTGAAGAGA AAGGACGATA TATCAGCGAT CTGTTGAAGA AGTTCTAGCT GTAGAAAAAG AAAGGCCGAG TTTAGGGAGC GCGATTCCCT GAGGAATAGT TTTCTGGGTA AAGATCTGCG ACGGAGGCTG AAGGCTGGGT CAGGACGTGG GACGGCACGA AATGGCATGT GCTTGAGGAT ATGGATTGCC GTCGAAGCTC AAGAATTTCA GTATGATGGA TTCACCGATC AAGTTGTTCG GGAAAACAAT TGCTAAAGCT GCCGCTTCCG CATTCACAAC ATCATCAGGT GAAGCAGACG ACGCTGAAGC AGTCCCGACT ACGAGCAGTG GGGGCTGGGT TGATTTGCCA TCGTCGTCGC AGGATGTGAA GGAAAATGGA GCGGAAAGCA GCAGACTGGG GGAGATCAAT GGAGGCGGGG TGACGTTCAC GAGGCAGGAG GTGAAACGAG GATCGTCGCC CGACCGGACG TCGTCGGCGT GCAACAGCGC GGAGGAGGAG AAGCTGTGCG CGTCGCCGCG AGGCGGAGGC GGGGCCACGG GGGGAGCAGG AGCAGAGCTG ACGCCCTCGG CCTCGGGGGG CGAGGCGGGC GCGGGCGACG ACGAGGGCAG CGAGGAGGAG GATGGATCGG GCATGAATGG GCGCAGTAAA AAGGATGGCG GCGACGATGG CGGCAAGGGA GGGGAGAAGA TGCCCCGACG GCCCGAGAAT GCTGTTGCGT GTCCTCGATG CCATAGTTTT GAGACGAAGT TTTGTTACTA CAACAATTAC AACGTCAATC AGCCCCGGCA CTTCTGCAAG CACTGCCAGC GCTACTGGAC CGCGGGCGGC ACGCTGCGCA ACGTGCCGGT GGGCGCCGGG CGGCGCAAGA ACAAGCACGG CAGCACCATC GCGCCGCGCG GCCAGACGCC CGAGGTCGGC ACCGTGCGCA GCGACGCGCC CGACATCGCC TCGCCGCTCA TCGCGTCCAA GGGCGGCGTC GGGCCCGTGC CCGTGCAGGT CGCGGTCGTG CAGGCCGCGG GCAGCAAGGG CGGGATTGTG CGCATGGCCG TGCCTGCGGC CAGCGGCGAC CCCTCGGTTC TGCCGTTTCT GCGAATGCAG CCCTCGCCGA TGGACACCGC CTCCATCTTC ATGGCCTCGT CCGATGCCGG CACCTCGAGC GACACGGTCA CCGTGGCCTG CAAGCGCGGC CGGCTGGCCA CTCCCGGGTT CAGCGACGCA TCCACAGGTG CCAACGACAT GGAGCAGCAG CAGCAGCAGC AGCAGCAGCC GTCTTGGGGG CAGCAGTCGT CGACGAATGA TGAATCCGCC TGCTCGCCCC TCACGTCGGC GAATGGCAAT GTTGTGGTGC ATGAGATTAA GGGCGAACCC GGGTCAGCGT GTCAGATGAT GGGTGTGGCA GCGGTATCAG GAGTGGGGGG GCCCGAGCAG CAGCAGCAGC AGCAGCAACA ACAGCAACAG CAGCAGCAGC AGCAGCAGCA TCCTGCGACG AACAACGGCA TGGCCGGTCC AGGGGGTTGT TGGTCTGCTG CCGGTCCGCA ATCGAGCGTA CCTCCGCCCG GGGCCGCGGG AGCCCCTTAC GGATTCTATA ACGGAGGATG GCCGTATGGG TACAACGTGG GCTGGAGCGG GCCTCCTGCA TTCTGCGCCG GGGGAGTTGC CACTGCGGGC ACGGGCATGC CGGGCCCTCC CCCGCCGGGC AACATCGCTG CGTGGAATGG AGCCGGGGGC AGCGTCTGGA CCGGGGTTCC TTGGCCCATG CCGGGCCTGG CTTGGGGCCC CCCCTGGGCT ATGGCGCCGT GGGCCATGAG TGCGGGTCAC GGTGGGGCTA GCATGGGGAG CATTACGCAG ACGATTTCGA TGAGCTCCGG TGCTGCTGCT GGCATGGTCA CTGTGCCGGT GCCCTGCAGT ACGACTGCCA GTGGTGGTGG TCCTGCGTCC GCTGCGCCCC CGTCATCGCC CTCATCATCA CTGGGCAAGC ATTCGCGCGG GGGGCCGCCG GTGGGGGCCC CTGCATCGTC TGCCGCAGCA GCTGCTGCTT GCAATGGCGC AGGAGGAGCA GGTGGGGGAG GAGGAGGCGG CGGAGGAGGC CGCATGGAGG GAGGCCTGTG GGCGCCCAAA TCGCTGCGAA TGGCTGATCC TGAGGAGGCA ATGCGAAGTT CGGTTTGGAG GATACTGGGA GTCGGTTCCC GAGCCGACAT GACGACGGCC AGCACATTTA AAGCGTTCCA GCCTAGAAAC GAGAGTAAGA AGATTTCCGA TGATGATCAA CAAGCAGTGC AAGCGTCGTT GCATGCGAAC CCTGCAGCGA TGTCTCGTTC CATGAATTTC CACGAGAGTA ACTAGTACGG TCGCAAATTG AAACAGCAGA TCATGAGCCA GCCACACAAT TTTATAAGTT CCGATGAAAG AAACCAGCTT AGTAGAACGT AATTCATTCA GTGCAGGTTT AAGACCCAGA TCCCAGTATT CTGGGTTCGA GGAGCATGCT TATCTGATTG CGCTTCCGGG ATTGTAGATT CTCCGTGCTT GTGTGAATAG ACCAGTTTTG ACTCCCTTGG GTTTCTGCCC AAGTTGTGGG GGCATTATAT TCACAAGAAA TATTTGACAA TGTA |
CDS |
| >Mp1g18540.1 ATGATGGATT CACCGATCAA GTTGTTCGGG AAAACAATTG CTAAAGCTGC CGCTTCCGCA TTCACAACAT CATCAGGTGA AGCAGACGAC GCTGAAGCAG TCCCGACTAC GAGCAGTGGG GGCTGGGTTG ATTTGCCATC GTCGTCGCAG GATGTGAAGG AAAATGGAGC GGAAAGCAGC AGACTGGGGG AGATCAATGG AGGCGGGGTG ACGTTCACGA GGCAGGAGGT GAAACGAGGA TCGTCGCCCG ACCGGACGTC GTCGGCGTGC AACAGCGCGG AGGAGGAGAA GCTGTGCGCG TCGCCGCGAG GCGGAGGCGG GGCCACGGGG GGAGCAGGAG CAGAGCTGAC GCCCTCGGCC TCGGGGGGCG AGGCGGGCGC GGGCGACGAC GAGGGCAGCG AGGAGGAGGA TGGATCGGGC ATGAATGGGC GCAGTAAAAA GGATGGCGGC GACGATGGCG GCAAGGGAGG GGAGAAGATG CCCCGACGGC CCGAGAATGC TGTTGCGTGT CCTCGATGCC ATAGTTTTGA GACGAAGTTT TGTTACTACA ACAATTACAA CGTCAATCAG CCCCGGCACT TCTGCAAGCA CTGCCAGCGC TACTGGACCG CGGGCGGCAC GCTGCGCAAC GTGCCGGTGG GCGCCGGGCG GCGCAAGAAC AAGCACGGCA GCACCATCGC GCCGCGCGGC CAGACGCCCG AGGTCGGCAC CGTGCGCAGC GACGCGCCCG ACATCGCCTC GCCGCTCATC GCGTCCAAGG GCGGCGTCGG GCCCGTGCCC GTGCAGGTCG CGGTCGTGCA GGCCGCGGGC AGCAAGGGCG GGATTGTGCG CATGGCCGTG CCTGCGGCCA GCGGCGACCC CTCGGTTCTG CCGTTTCTGC GAATGCAGCC CTCGCCGATG GACACCGCCT CCATCTTCAT GGCCTCGTCC GATGCCGGCA CCTCGAGCGA CACGGTCACC GTGGCCTGCA AGCGCGGCCG GCTGGCCACT CCCGGGTTCA GCGACGCATC CACAGGTGCC AACGACATGG AGCAGCAGCA GCAGCAGCAG CAGCAGCCGT CTTGGGGGCA GCAGTCGTCG ACGAATGATG AATCCGCCTG CTCGCCCCTC ACGTCGGCGA ATGGCAATGT TGTGGTGCAT GAGATTAAGG GCGAACCCGG GTCAGCGTGT CAGATGATGG GTGTGGCAGC GGTATCAGGA GTGGGGGGGC CCGAGCAGCA GCAGCAGCAG CAGCAACAAC AGCAACAGCA GCAGCAGCAG CAGCAGCATC CTGCGACGAA CAACGGCATG GCCGGTCCAG GGGGTTGTTG GTCTGCTGCC GGTCCGCAAT CGAGCGTACC TCCGCCCGGG GCCGCGGGAG CCCCTTACGG ATTCTATAAC GGAGGATGGC CGTATGGGTA CAACGTGGGC TGGAGCGGGC CTCCTGCATT CTGCGCCGGG GGAGTTGCCA CTGCGGGCAC GGGCATGCCG GGCCCTCCCC CGCCGGGCAA CATCGCTGCG TGGAATGGAG CCGGGGGCAG CGTCTGGACC GGGGTTCCTT GGCCCATGCC GGGCCTGGCT TGGGGCCCCC CCTGGGCTAT GGCGCCGTGG GCCATGAGTG CGGGTCACGG TGGGGCTAGC ATGGGGAGCA TTACGCAGAC GATTTCGATG AGCTCCGGTG CTGCTGCTGG CATGGTCACT GTGCCGGTGC CCTGCAGTAC GACTGCCAGT GGTGGTGGTC CTGCGTCCGC TGCGCCCCCG TCATCGCCCT CATCATCACT GGGCAAGCAT TCGCGCGGGG GGCCGCCGGT GGGGGCCCCT GCATCGTCTG CCGCAGCAGC TGCTGCTTGC AATGGCGCAG GAGGAGCAGG TGGGGGAGGA GGAGGCGGCG GAGGAGGCCG CATGGAGGGA GGCCTGTGGG CGCCCAAATC GCTGCGAATG GCTGATCCTG AGGAGGCAAT GCGAAGTTCG GTTTGGAGGA TACTGGGAGT CGGTTCCCGA GCCGACATGA CGACGGCCAG CACATTTAAA GCGTTCCAGC CTAGAAACGA GAGTAAGAAG ATTTCCGATG ATGATCAACA AGCAGTGCAA GCGTCGTTGC ATGCGAACCC TGCAGCGATG TCTCGTTCCA TGAATTTCCA CGAGAGTAAC TAG |
Protein |
| >Mp1g18540.1 MMDSPIKLFG KTIAKAAASA FTTSSGEADD AEAVPTTSSG GWVDLPSSSQ DVKENGAESS RLGEINGGGV TFTRQEVKRG SSPDRTSSAC NSAEEEKLCA SPRGGGGATG GAGAELTPSA SGGEAGAGDD EGSEEEDGSG MNGRSKKDGG DDGGKGGEKM PRRPENAVAC PRCHSFETKF CYYNNYNVNQ PRHFCKHCQR YWTAGGTLRN VPVGAGRRKN KHGSTIAPRG QTPEVGTVRS DAPDIASPLI ASKGGVGPVP VQVAVVQAAG SKGGIVRMAV PAASGDPSVL PFLRMQPSPM DTASIFMASS DAGTSSDTVT VACKRGRLAT PGFSDASTGA NDMEQQQQQQ QQPSWGQQSS TNDESACSPL TSANGNVVVH EIKGEPGSAC QMMGVAAVSG VGGPEQQQQQ QQQQQQQQQQ QQHPATNNGM AGPGGCWSAA GPQSSVPPPG AAGAPYGFYN GGWPYGYNVG WSGPPAFCAG GVATAGTGMP GPPPPGNIAA WNGAGGSVWT GVPWPMPGLA WGPPWAMAPW AMSAGHGGAS MGSITQTISM SSGAAAGMVT VPVPCSTTAS GGGPASAAPP SSPSSSLGKH SRGGPPVGAP ASSAAAAAAC NGAGGAGGGG GGGGGGRMEG GLWAPKSLRM ADPEEAMRSS VWRILGVGSR ADMTTASTFK AFQPRNESKK ISDDDQQAVQ ASLHANPAAM SRSMNFHESN |