Mp1g18730
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.90.10.10 | - |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins |
| MapolyID | Mapoly0001s0211 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
A-type lectin; down DEG.
0 core 1 peripheral
Jibran, R., et al. (2024b)
· Frontiers in Plant Science research experimental background
A-type lectin; down DEG.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g18730 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g18730.1 ATCTGGCTCG TGAGATCCTC GAATTCCCGA CCTCAAATTT TCAGCAAGTC GTTCGGTGCG ATCGATCGAT CGATTGACAC ATCACATCTT CATTTGGCCA GTCTCACGGG TAGACACACA CACAGACAGA GAACCCAACG AGGGGAACTA TGGCTGGTTT CGGCTGCGTG GCCGGGGTGG CGGTGCTCAT GTTGGCAGCG ACGGCTCTGG GCGTGAGTGC TCAAGGCGGA AACGTGTTCG AGTGGGATTT CGCGGCTCGC GGTGACGCAG TGTGCACGAA CTTGGCCACG GGTGTGACGA TCGACAATCA TCCCCCGTAT GCCATGAACA CAGCAGGCTT CAGCGACTCT CACCGCAACA TCATCTCCTA TGACACGGAC GATATCTATG CCTTAGGATT CGAACAGTAC TCTCCCGGAG AATTTTACCT GTCCATCTAC AAATGGTTCC CGAGCAACAG CTCCGCTGGT CCTTCGGTGT TTCAAGCCAA GGGCCTGAAT ACCAACACCG TGGACGAAGG TGCCACCTTC ACCATCCTCA GCAACGGCTC GCTCGATCTG AGAAGCTCCG ATGGAACTCT GGTAAGCATC TGGTGGATGA AATGGCCCCT TAGCTAGATT ACATTCACGT GCCCTCTGCC TTCCATCTTT GTATTCTGAA GTTCAGTCGT CCAAGTCTTC ACAGCATTTG CGGCTACAGG AAGGAATCAG GCGTTGCGTG CATGCATGAC TCACAAATCT CTCCACTCCG TTGTGCAGGT TTGGACAACA GGCACAGAGT TTGCTGGCGC AGTAAGCATG GAATTTAACA TGGACGAAGG CAATCTGATT CTGTACCATT CTACTGGCGC TATAGTCTGG CAGAGCATTG ACAACAACGG ATCTCCTTGA ATGCCCACGT AACCAATTCC AGTACGTTTA ACACTAGAAG ATGCTGGCGT CGTATTGCAA CCACATCTAC GCAGTTATCG TGCCTGCTGC ATGAAGACAG TCGAACGTCC GACCATCCAT CTTAAGGAAA TTTGAACTTA GCCCAGCTAC ATCGTCGCCC GTGACAAAGG TCCCCATGAT ACTGCATGCA TGCAGTCATT GTGCTCATGA TCTTTTGGCT TCGAGCTATG GATAGAAGGA TATGGTTACA ACATCGTGAA TTATCAGCTG AGTGGCAATT CTATGTGATA AGATAGATTG CAGGCTCTCA AATGTCCCTC TCCAGAAAAA ATAAACGTTG ATTTCTACGA AGTTTGATAA TTACCGTCAA CTCACCTTGT AATGGTACCG CTGCAAATGC TGCAATATTC ACAGCAATCA GCTAATTTGT GGGGATGCGA CTCGCA |
mRNA UTR + CDS |
| >Mp1g18730.1 ATCTGGCTCG TGAGATCCTC GAATTCCCGA CCTCAAATTT TCAGCAAGTC GTTCGGTGCG ATCGATCGAT CGATTGACAC ATCACATCTT CATTTGGCCA GTCTCACGGG TAGACACACA CACAGACAGA GAACCCAACG AGGGGAACTA TGGCTGGTTT CGGCTGCGTG GCCGGGGTGG CGGTGCTCAT GTTGGCAGCG ACGGCTCTGG GCGTGAGTGC TCAAGGCGGA AACGTGTTCG AGTGGGATTT CGCGGCTCGC GGTGACGCAG TGTGCACGAA CTTGGCCACG GGTGTGACGA TCGACAATCA TCCCCCGTAT GCCATGAACA CAGCAGGCTT CAGCGACTCT CACCGCAACA TCATCTCCTA TGACACGGAC GATATCTATG CCTTAGGATT CGAACAGTAC TCTCCCGGAG AATTTTACCT GTCCATCTAC AAATGGTTCC CGAGCAACAG CTCCGCTGGT CCTTCGGTGT TTCAAGCCAA GGGCCTGAAT ACCAACACCG TGGACGAAGG TGCCACCTTC ACCATCCTCA GCAACGGCTC GCTCGATCTG AGAAGCTCCG ATGGAACTCT GGTTTGGACA ACAGGCACAG AGTTTGCTGG CGCAGTAAGC ATGGAATTTA ACATGGACGA AGGCAATCTG ATTCTGTACC ATTCTACTGG CGCTATAGTC TGGCAGAGCA TTGACAACAA CGGATCTCCT TGAATGCCCA CGTAACCAAT TCCAGTACGT TTAACACTAG AAGATGCTGG CGTCGTATTG CAACCACATC TACGCAGTTA TCGTGCCTGC TGCATGAAGA CAGTCGAACG TCCGACCATC CATCTTAAGG AAATTTGAAC TTAGCCCAGC TACATCGTCG CCCGTGACAA AGGTCCCCAT GATACTGCAT GCATGCAGTC ATTGTGCTCA TGATCTTTTG GCTTCGAGCT ATGGATAGAA GGATATGGTT ACAACATCGT GAATTATCAG CTGAGTGGCA ATTCTATGTG ATAAGATAGA TTGCAGGCTC TCAAATGTCC CTCTCCAGAA AAAATAAACG TTGATTTCTA CGAAGTTTGA TAATTACCGT CAACTCACCT TGTAATGGTA CCGCTGCAAA TGCTGCAATA TTCACAGCAA TCAGCTAATT TGTGGGGATG CGACTCGCA |
CDS |
| >Mp1g18730.1 ATGGCTGGTT TCGGCTGCGT GGCCGGGGTG GCGGTGCTCA TGTTGGCAGC GACGGCTCTG GGCGTGAGTG CTCAAGGCGG AAACGTGTTC GAGTGGGATT TCGCGGCTCG CGGTGACGCA GTGTGCACGA ACTTGGCCAC GGGTGTGACG ATCGACAATC ATCCCCCGTA TGCCATGAAC ACAGCAGGCT TCAGCGACTC TCACCGCAAC ATCATCTCCT ATGACACGGA CGATATCTAT GCCTTAGGAT TCGAACAGTA CTCTCCCGGA GAATTTTACC TGTCCATCTA CAAATGGTTC CCGAGCAACA GCTCCGCTGG TCCTTCGGTG TTTCAAGCCA AGGGCCTGAA TACCAACACC GTGGACGAAG GTGCCACCTT CACCATCCTC AGCAACGGCT CGCTCGATCT GAGAAGCTCC GATGGAACTC TGGTTTGGAC AACAGGCACA GAGTTTGCTG GCGCAGTAAG CATGGAATTT AACATGGACG AAGGCAATCT GATTCTGTAC CATTCTACTG GCGCTATAGT CTGGCAGAGC ATTGACAACA ACGGATCTCC TTGA |
Protein |
| >Mp1g18730.1 MAGFGCVAGV AVLMLAATAL GVSAQGGNVF EWDFAARGDA VCTNLATGVT IDNHPPYAMN TAGFSDSHRN IISYDTDDIY ALGFEQYSPG EFYLSIYKWF PSNSSAGPSV FQAKGLNTNT VDEGATFTIL SNGSLDLRSS DGTLVWTTGT EFAGAVSMEF NMDEGNLILY HSTGAIVWQS IDNNGSP |