Mp1g19150



Description

Annotation

Database ID Description
SUPERFAMILY SSF56024 Phospholipase D/nuclease
SMART SM00155 pld_4
ProSiteProfiles PS50035 Phospholipase D phosphodiesterase active site profile.
Pfam PF12357 Phospholipase D C terminal
CDD cd04015 C2_plant_PLD
SMART SM00239 C2_3c
Pfam PF00168 C2 domain
Pfam PF00614 Phospholipase D Active site motif
PANTHER PTHR18896 PHOSPHOLIPASE D
Gene3D G3DSA:3.30.870.10 Endonuclease Chain A
SUPERFAMILY SSF49562 C2 domain (Calcium/lipid-binding domain, CaLB)
PIRSF PIRSF036470 PLD_plant
Gene3D G3DSA:2.60.40.150 C2 domain
ProSiteProfiles PS50004 C2 domain profile.
KEGG K01115 phospholipase D1/2 [EC:3.1.4.4]
KOG KOG1329 Phospholipase D1; [I]
MapolyID Mapoly0001s0253 -
GO GO:0003824 catalytic activity
GO GO:0005509 calcium ion binding
GO GO:0009395 phospholipid catabolic process
GO GO:0004630 phospholipase D activity
GO GO:0046470 phosphatidylcholine metabolic process
GO GO:0005886 plasma membrane
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpPLD7 lipid turnover protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g19150.1 chr1:20054415..20059819 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g19150 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g19150 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.