Mp1g19210



Description

Annotation

Database ID Description
Coils Coil Coil
PANTHER PTHR16223 TRANSCRIPTION FACTOR BHLH83-RELATED
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00353 finulus
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
FunFam G3DSA:4.10.280.10:FF:000021 Transcription factor bHLH130 family
Pfam PF00010 Helix-loop-helix DNA-binding domain
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
CDD cd11393 bHLH_AtbHLH_like
Gene3D G3DSA:4.10.280.10 -
KOG KOG1318 Helix loop helix transcription factor EB; N-term missing; C-term missing; [K]
MapolyID Mapoly0001s0259 -
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0005634 nucleus
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0046983 protein dimerization activity
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH27 transcription factor, bHLH Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g19210.1 chr1:20148750..20153980 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g19210.2 chr1:20149337..20153985 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g19210.3 chr1:20149524..20153963 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g19210.4 chr1:20149523..20153959 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.