Mp1g20240



Description

Annotation

Database ID Description
SUPERFAMILY SSF54427 NTF2-like
FunFam G3DSA:3.30.200.20:FF:000527 mitogen-activated protein kinase kinase 3
Gene3D G3DSA:3.10.450.50 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
CDD cd06623 PKc_MAPKK_plant_like
ProSiteProfiles PS50011 Protein kinase domain profile.
SMART SM00220 serkin_6
ProSiteProfiles PS50177 Nuclear transport factor 2 domain profile.
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
Pfam PF00069 Protein kinase domain
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
FunFam G3DSA:3.10.450.50:FF:000012 Mitogen-activated protein kinase kinase 3
PANTHER PTHR48013 DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED
FunFam G3DSA:1.10.510.10:FF:000432 mitogen-activated protein kinase kinase 3
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
KEGG K20607 mitogen-activated protein kinase kinase 3 [EC:2.7.12.2]
KOG KOG0581 Mitogen-activated protein kinase kinase (MAP2K); [T]
MapolyID Mapoly0001s0361 -
GO GO:0005524 ATP binding
GO GO:0000165 MAPK cascade
GO GO:0004672 protein kinase activity
GO GO:0006468 protein phosphorylation
GO GO:0004708 MAP kinase kinase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpMKK2 MAP-kinase, MAPKK Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g20240.1 chr1:21230410..21236998 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g20240 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g20240 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.