Mp1g21590
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF02991 | Autophagy protein Atg8 ubiquitin like |
| Gene3D | G3DSA:3.10.20.90 | - |
| FunFam | G3DSA:3.10.20.90:FF:000010 | Autophagy-related protein |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| CDD | cd16128 | Ubl_ATG8 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like |
| PANTHER | PTHR10969 | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED |
| KEGG | K08341 | GABA(A) receptor-associated protein |
| KOG | KOG1654 | Microtubule-associated anchor protein involved in autophagy and membrane trafficking; [Z] |
| MapolyID | Mapoly0001s0494 | - |
| GO | GO:0006995 | cellular response to nitrogen starvation |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpATG8a | Autophagy protein | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Autophagy protein (from nomenclature)
0 core 4 peripheral
Abdrakhmanov A, Ethier E, Anisimova AS, Grujic N, Papareddy RK, Clavel M, Karagöz GE, Hallacli E, Dagdas Y. (2026)
· Developmental cell research experimental comparator
ATG8 isoform identified/tested (Y2H) as the autophagy partner bound by the MpEDC4-MpDCP1 receptor module.
Bowman, J. L., et al. (2022)
· Plant Cell review citation comparator
Marchantia gene cited in Bowman et al. (2022) model-system review
Norizuki, T., et al. (2019)
· Frontiers in Plant Science research experimental tool
Isoform expressed as mCitrine-MpATG8a fusion under its native promoter; used as an autophagy marker showing autophagy-dependent vacuolar puncta and cleavage on immunoblots.
Zhao, J., et al. (2022)
· Journal of Cell Biology research experimental tool
Autophagy marker isoform used as an mScarlet/GFP-tagged reporter that colocalizes with MpCFS1 and serves as the GFP-release degradation substrate in Marchantia.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g21590 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g21590.1 CTCGAGCCTC GGTCGGCGTT CCATCCCGGC CCGTGCTGCT CGTCGGTCCC TTTCGCTCGC TTCATCTGTT CGTCGTTGGT TCGGTGGCTC GCTCATTCGC CACACCTCCC TCCTCCTCCT GCTCCTCGTC CTCCAGCCGA GCCCCGAGGC CTGACTACTT CGTGACAGAG ACCGATCGCC CTTCATTCTC AGTTTTCTTA GATAGTGCTC GGCTCCTGCT GCCTGCCTGC TCGCTGCTCG CCCGCTCGCT CTCGCGCTTT TGTTGGCTTC GATCATCATA ATTATCATCG GTAGAATTGG CCTGCAACAA GTGGGTGTCT CTCTCGGTCC TCTTGTCTCC TGCGCGTGAC TGTCGTCGAG GGTTTCGTTC GGCTTGTTGG TTGTGCTTGC TTCTTGCTTG CTTGCCGTCT GCTTGCGGGT AGTTTGTGTT GGGGATTGAT TATCTTGGCG GAGCGGTGGA TGTTGTCGAT ATTTTGCATG TGACGCAGGT CTGATCGGTA GGTCGGTTCG GAGGGTGGGG TTGCTTGTTT CTAGGGTGGG ACGAGGGGCC TGTCGAGAAG TCGTCGTCTT GTTGCTGGTT CCGTCGGTTG TTTGTGGGAG ATTGTTGTTG ACGTTTGCGT GGCCTGCTCG CCTCAGTTCC ATCGCATCAT CGCTGGTGCA GTGCAGTTTC GGTGCATCGC TGATTCACGG CTGCTCGGTT CGGTGCTTTC GCTTCTTCTT GCACGTCTTA TTGACGTTCC TTGGTGTTGG TTCTTCGCCT TCTATTGATT GTGAAGAATT GGGAGGGCAA TTGAGAAGTA CTTGAAGGAC GACGACCTTC GGACGACAGG TGGTCGGTTG CTGGTTGGTT GTTCGGTTGT GAGAAGGGAA GAGACGCGTG CGCTTGTTCA GGGAGCGGAG GAGTAAAACG TCGAGCGAAG AAGAAAGTAG TAGCAGCGGC AAGATGACGG GGAAGAGGAG TTCGTTCAAG AAGGAGCATC CGCTGGAGAA GAGACAGGCC GAGGCGTCGA GAATTCGCAA CAAGTATCCC GACAGAATTC CCGTTATTGT GGAGAGGGCT GAGAAGAGCG ACATCCCGGA CATTGACAAG AAGAAGTACT TGGTGCCGGC CGACTTGACC GTGGGGCAGT TCGTGTTTGT GATTCGTAAG AGGATCAAGC TAAGCGCGGA AAAGGCTATC TTCATCTTCG TGCGGAATGT TCTTCCGCCT ACGGCCGCCA TGATGTCTGC TATATACGAT GAACATAAGG ATGACGATGG CTTCCTATAC TTGACATACA GTGGGGAGAA CACGTTCGGT GATTTGAACT CACAGTTGAT GGCATGCAAT TGCCTTCCTC TGGTTTAGAT AATCCGTTCG CTAGATGCGA AAAGGAAACT CACAGGAGAC CAAAGAATGT GCGATGCAAT TGGGCTGATT TTTTGTATAT AGATCGTGCC GTCTCCTTTC TGTACATAGG TCATGTCCAT GGCTCTTCTT CTCAAGCAAG GTTCTCTTCA TTTAAATAGC CCTTTTGTTG TTGATCAGCA TCTCTTCCAG GATGGCTCAT CAGCTTCTCA ATTTGAGCCC GATTAGGCCC TTGCGAAACT CTTATTTCTT TTCCATAGTT TGTATATTTT TTGAAGTGGC TAGTTTACCT GTCCCGATTT CAAAACTATC GTTTTGGTTT TTGGCCATAT AACTTCAGGA CAAGATTCTG TTTACAATTG TGAAGTAAGG TTATCTGCAC TTCTACATCA ACTGGCTGTT TCCAGTTGGT AGTGTCGTAC CTTGATGAAG TAAGGCGCTC ATTTCTTGAA TTGCCTTGCA TGCTTGGCCT TCCAATGGAT ACACGTCTGC CTCATGTATA TGCCCTCTAT CCTTGAAGGC GAGGAATCGG TGCCTGCTTT GAGGGATGCA GTCGATTTGT AGATTGTCCT GGTTTACAAT ACACAATTGT ATAAAGGTAA TTTGATCATA CCTTGGCCGC TGATTGTGGC GGGTTGCATC GAAATTCTGG AAGCATTCAA TTCATCTCTG CTGGTCCAAT |
mRNA UTR + CDS |
| >Mp1g21590.1 CTCGAGCCTC GGTCGGCGTT CCATCCCGGC CCGTGCTGCT CGTCGGTCCC TTTCGCTCGC TTCATCTGTT CGTCGTTGGT TCGGTGGCTC GCTCATTCGC CACACCTCCC TCCTCCTCCT GCTCCTCGTC CTCCAGCCGA GCCCCGAGGC CTGACTACTT CGTGACAGAG ACCGATCGCC CTTCATTCTC AGTTTTCTTA GATAGTGCTC GGCTCCTGCT GCCTGCCTGC TCGCTGCTCG CCCGCTCGCT CTCGCGCTTT TGTTGGCTTC GATCATCATA ATTATCATCG GTAGAATTGG CCTGCAACAA TTCCATCGCA TCATCGCTGG TGCAGTGCAG TTTCGGTGCA TCGCTGATTC ACGGCTGCTC GGTTCGGTGC TTTCGCTTCT TCTTGCACGT CTTATTGACG TTCCTTGGTG TTGGTTCTTC GCCTTCTATT GATTGTGAAG AATTGGGAGG GCAATTGAGA AGTACTTGAA GGACGACGAC CTTCGGACGA CAGGTGGTCG GTTGCTGGTT GGTTGTTCGG TTGTGAGAAG GGAAGAGACG CGTGCGCTTG TTCAGGGAGC GGAGGAGTAA AACGTCGAGC GAAGAAGAAA GTAGTAGCAG CGGCAAGATG ACGGGGAAGA GGAGTTCGTT CAAGAAGGAG CATCCGCTGG AGAAGAGACA GGCCGAGGCG TCGAGAATTC GCAACAAGTA TCCCGACAGA ATTCCCGTTA TTGTGGAGAG GGCTGAGAAG AGCGACATCC CGGACATTGA CAAGAAGAAG TACTTGGTGC CGGCCGACTT GACCGTGGGG CAGTTCGTGT TTGTGATTCG TAAGAGGATC AAGCTAAGCG CGGAAAAGGC TATCTTCATC TTCGTGCGGA ATGTTCTTCC GCCTACGGCC GCCATGATGT CTGCTATATA CGATGAACAT AAGGATGACG ATGGCTTCCT ATACTTGACA TACAGTGGGG AGAACACGTT CGGTGATTTG AACTCACAGT TGATGGCATG CAATTGCCTT CCTCTGGTTT AGATAATCCG TTCGCTAGAT GCGAAAAGGA AACTCACAGG AGACCAAAGA ATGTGCGATG CAATTGGGCT GATTTTTTGT ATATAGATCG TGCCGTCTCC TTTCTGTACA TAGGTCATGT CCATGGCTCT TCTTCTCAAG CAAGGTTCTC TTCATTTAAA TAGCCCTTTT GTTGTTGATC AGCATCTCTT CCAGGATGGC TCATCAGCTT CTCAATTTGA GCCCGATTAG GCCCTTGCGA AACTCTTATT TCTTTTCCAT AGTTTGTATA TTTTTTGAAG TGGCTAGTTT ACCTGTCCCG ATTTCAAAAC TATCGTTTTG GTTTTTGGCC ATATAACTTC AGGACAAGAT TCTGTTTACA ATTGTGAAGT AAGGTTATCT GCACTTCTAC ATCAACTGGC TGTTTCCAGT TGGTAGTGTC GTACCTTGAT GAAGTAAGGC GCTCATTTCT TGAATTGCCT TGCATGCTTG GCCTTCCAAT GGATACACGT CTGCCTCATG TATATGCCCT CTATCCTTGA AGGCGAGGAA TCGGTGCCTG CTTTGAGGGA TGCAGTCGAT TTGTAGATTG TCCTGGTTTA CAATACACAA TTGTATAAAG GTAATTTGAT CATACCTTGG CCGCTGATTG TGGCGGGTTG CATCGAAATT CTGGAAGCAT TCAATTCATC TCTGCTGGTC CAAT |
CDS |
| >Mp1g21590.1 ATGACGGGGA AGAGGAGTTC GTTCAAGAAG GAGCATCCGC TGGAGAAGAG ACAGGCCGAG GCGTCGAGAA TTCGCAACAA GTATCCCGAC AGAATTCCCG TTATTGTGGA GAGGGCTGAG AAGAGCGACA TCCCGGACAT TGACAAGAAG AAGTACTTGG TGCCGGCCGA CTTGACCGTG GGGCAGTTCG TGTTTGTGAT TCGTAAGAGG ATCAAGCTAA GCGCGGAAAA GGCTATCTTC ATCTTCGTGC GGAATGTTCT TCCGCCTACG GCCGCCATGA TGTCTGCTAT ATACGATGAA CATAAGGATG ACGATGGCTT CCTATACTTG ACATACAGTG GGGAGAACAC GTTCGGTGAT TTGAACTCAC AGTTGATGGC ATGCAATTGC CTTCCTCTGG TTTAG |
Protein |
| >Mp1g21590.1 MTGKRSSFKK EHPLEKRQAE ASRIRNKYPD RIPVIVERAE KSDIPDIDKK KYLVPADLTV GQFVFVIRKR IKLSAEKAIF IFVRNVLPPT AAMMSAIYDE HKDDDGFLYL TYSGENTFGD LNSQLMACNC LPLV |
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g21590.2 CTCGAGCCTC GGTCGGCGTT CCATCCCGGC CCGTGCTGCT CGTCGGTCCC TTTCGCTCGC TTCATCTGTT CGTCGTTGGT TCGGTGGCTC GCTCATTCGC CACACCTCCC TCCTCCTCCT GCTCCTCGTC CTCCAGCCGA GCCCCGAGGC CTGACTACTT CGTGACAGAG ACCGATCGCC CTTCATTCTC AGTTTTCTTA GATAGTGCTC GGCTCCTGCT GCCTGCCTGC TCGCTGCTCG CCCGCTCGCT CTCGCGCTTT TGTTGGCTTC GATCATCATA ATTATCATCG GTAGAATTGG CCTGCAACAA GTGGGTGTCT CTCTCGGTCC TCTTGTCTCC TGCGCGTGAC TGTCGTCGAG GGTTTCGTTC GGCTTGTTGG TTGTGCTTGC TTCTTGCTTG CTTGCCGTCT GCTTGCGGGT AGTTTGTGTT GGGGATTGAT TATCTTGGCG GAGCGGTGGA TGTTGTCGAT ATTTTGCATG TGACGCAGGT CTGATCGGTA GGTCGGTTCG GAGGGTGGGG TTGCTTGTTT CTAGGGTGGG ACGAGGGGCC TGTCGAGAAG TCGTCGTCTT GTTGCTGGTT CCGTCGGTTG TTTGTGGGAG ATTGTTGTTG ACGTTTGCGT GGCCTGCTCG CCTCAGTTCC ATCGCATCAT CGCTGGTGCA GTGCAGTTTC GGTGCATCGC TGATTCACGG CTGCTCGGTT CGGTGCTTTC GCTTCTTCTT GCACGTCTTA TTGACGTTCC TTGGTGTTGG TTCTTCGCCT TCTATTGATT GTGAAGAATT GGGAGGGCAA TTGAGAAGTA CTTGAAGGAC GACGACCTTC GGACGACAGG TGGTCGGTTG CTGGTTGGTT GTTCGGTTGT GAGAAGGGAA GAGACGCGTG CGCTTGTTCA GGGAGCGGAG GAGTAAAACG TCGAGCGAAG AAGAAAGTAG TAGCAGCGGC AAGATGACGG GGAAGAGGAG TTCGTTCAAG AAGGAGCATC CGCTGGAGAA GAGACAGGCC GAGGCGTCGA GAATTCGCAA CAAGTATCCC GACAGAATTC CCGTTATTGT GGAGAGGGCT GAGAAGAGCG ACATCCCGGA CATTGACAAG AAGAAGTACT TGGTGCCGGC CGACTTGACC GTGGGGCAGT TCGTGTTTGT GATTCGTAAG AGGATCAAGC TAAGCGCGGA AAAGGCTATC TTCATCTTCG TGCGGAATGT TCTTCCGCCT ACGGCCGCCA TGATGTCTGC TATATACGAT GAACATAAGG ATGACGATGG CTTCCTATAC TTGACATACA GTGGGGAGAA CACGTTCGGT GATTTGAACT CACAGTTGAT GGCATGCAAT TGCCTTCCTC TGGTTTAGAT AATCCGTTCG CTAGATGCGA AAAGGAAACT CACAGGAGAC CAAAGAATGT GCGATGCAAT TGGGCTGATT TTTTGTATAT AGATCGTGCC GTCTCCTTTC TGTACATAGG TCATGTCCAT GGCTCTTCTT CTCAAGCAAG GTTCTCTTCA TTTAAATAGC CCTTTTGTTG TTGATCAGCA TCTCTTCCAG GATGGCTCAT CAGCTTCTCA ATTTGAGCCC GATTAGGCCC TTGCGAAACT CTTATTTCTT TTCCATAGTT TGTATATTTT TTGAAGTGGC TAGTTTACCT GTCCCGATTT CAAAACTATC GTTTTGGTTT TTGGCCATAT AACTTCAGGA CAAGATTCTG TTTACAATTG TGAAGTAAGG TTATCTGCAC TTCTACATCA ACTGGCTGTT TCCAGTTGGT AGTGTCGTAC CTTGATGAAG TAAGGCGCTC ATTTCTTGAA TTGCCTTGCA TGCTTGGCCT TCCAATGGAT ACACGTCTGC CTCATGTATA TGCCCTCTAT CCTTGAAGGC GAGGAATCGG TGCCTGCTTT GAGGGATGCA GTCGATTTGT AGATTGTCCT GGTTTACAAT ACACAATTGT ATAAAGGTAA TTTGATCATA CCTTGGCCGC TGATTGTGGC GGGTTGCATC GAAATTCTGG AAGCATTCAA TTCATCTCTG CTGGTCCAAT |
mRNA UTR + CDS |
| >Mp1g21590.2 CTCGAGCCTC GGTCGGCGTT CCATCCCGGC CCGTGCTGCT CGTCGGTCCC TTTCGCTCGC TTCATCTGTT CGTCGTTGGT TCGGTGGCTC GCTCATTCGC CACACCTCCC TCCTCCTCCT GCTCCTCGTC CTCCAGCCGA GCCCCGAGGC CTGACTACTT CGTGACAGAG ACCGATCGCC CTTCATTCTC AGTTTTCTTA GATAGTGCTC GGCTCCTGCT GCCTGCCTGC TCGCTGCTCG CCCGCTCGCT CTCGCGCTTT TGTTGGCTTC GATCATCATA ATTATCATCG GTAGAATTGG CCTGCAACAA AATTGGGAGG GCAATTGAGA AGTACTTGAA GGACGACGAC CTTCGGACGA CAGGTGGTCG GTTGCTGGTT GGTTGTTCGG TTGTGAGAAG GGAAGAGACG CGTGCGCTTG TTCAGGGAGC GGAGGAGTAA AACGTCGAGC GAAGAAGAAA GTAGTAGCAG CGGCAAGATG ACGGGGAAGA GGAGTTCGTT CAAGAAGGAG CATCCGCTGG AGAAGAGACA GGCCGAGGCG TCGAGAATTC GCAACAAGTA TCCCGACAGA ATTCCCGTTA TTGTGGAGAG GGCTGAGAAG AGCGACATCC CGGACATTGA CAAGAAGAAG TACTTGGTGC CGGCCGACTT GACCGTGGGG CAGTTCGTGT TTGTGATTCG TAAGAGGATC AAGCTAAGCG CGGAAAAGGC TATCTTCATC TTCGTGCGGA ATGTTCTTCC GCCTACGGCC GCCATGATGT CTGCTATATA CGATGAACAT AAGGATGACG ATGGCTTCCT ATACTTGACA TACAGTGGGG AGAACACGTT CGGTGATTTG AACTCACAGT TGATGGCATG CAATTGCCTT CCTCTGGTTT AGATAATCCG TTCGCTAGAT GCGAAAAGGA AACTCACAGG AGACCAAAGA ATGTGCGATG CAATTGGGCT GATTTTTTGT ATATAGATCG TGCCGTCTCC TTTCTGTACA TAGGTCATGT CCATGGCTCT TCTTCTCAAG CAAGGTTCTC TTCATTTAAA TAGCCCTTTT GTTGTTGATC AGCATCTCTT CCAGGATGGC TCATCAGCTT CTCAATTTGA GCCCGATTAG GCCCTTGCGA AACTCTTATT TCTTTTCCAT AGTTTGTATA TTTTTTGAAG TGGCTAGTTT ACCTGTCCCG ATTTCAAAAC TATCGTTTTG GTTTTTGGCC ATATAACTTC AGGACAAGAT TCTGTTTACA ATTGTGAAGT AAGGTTATCT GCACTTCTAC ATCAACTGGC TGTTTCCAGT TGGTAGTGTC GTACCTTGAT GAAGTAAGGC GCTCATTTCT TGAATTGCCT TGCATGCTTG GCCTTCCAAT GGATACACGT CTGCCTCATG TATATGCCCT CTATCCTTGA AGGCGAGGAA TCGGTGCCTG CTTTGAGGGA TGCAGTCGAT TTGTAGATTG TCCTGGTTTA CAATACACAA TTGTATAAAG GTAATTTGAT CATACCTTGG CCGCTGATTG TGGCGGGTTG CATCGAAATT CTGGAAGCAT TCAATTCATC TCTGCTGGTC CAAT |
CDS |
| >Mp1g21590.2 ATGACGGGGA AGAGGAGTTC GTTCAAGAAG GAGCATCCGC TGGAGAAGAG ACAGGCCGAG GCGTCGAGAA TTCGCAACAA GTATCCCGAC AGAATTCCCG TTATTGTGGA GAGGGCTGAG AAGAGCGACA TCCCGGACAT TGACAAGAAG AAGTACTTGG TGCCGGCCGA CTTGACCGTG GGGCAGTTCG TGTTTGTGAT TCGTAAGAGG ATCAAGCTAA GCGCGGAAAA GGCTATCTTC ATCTTCGTGC GGAATGTTCT TCCGCCTACG GCCGCCATGA TGTCTGCTAT ATACGATGAA CATAAGGATG ACGATGGCTT CCTATACTTG ACATACAGTG GGGAGAACAC GTTCGGTGAT TTGAACTCAC AGTTGATGGC ATGCAATTGC CTTCCTCTGG TTTAG |
Protein |
| >Mp1g21590.2 MTGKRSSFKK EHPLEKRQAE ASRIRNKYPD RIPVIVERAE KSDIPDIDKK KYLVPADLTV GQFVFVIRKR IKLSAEKAIF IFVRNVLPPT AAMMSAIYDE HKDDDGFLYL TYSGENTFGD LNSQLMACNC LPLV |