Mp1g25140
Description
Annotation
| Database | ID | Description |
|---|---|---|
| ProSiteProfiles | PS50157 | Zinc finger C2H2 type domain profile. |
| SUPERFAMILY | SSF57667 | beta-beta-alpha zinc fingers |
| PANTHER | PTHR45801 | OS07G0101800 PROTEIN |
| ProSitePatterns | PS00028 | Zinc finger C2H2 type domain signature. |
| MapolyID | Mapoly0061s0011 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpSUP | transcription factor | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
transcription factor (from nomenclature)
0 core 1 peripheral
Hernandez-Muñoz, A., et al. (2024)
· New Phytologist research experimental background
MpSUP SUPERMAN-like; MpGLK target
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g25140 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g25140.1 AGTCATCTCG TGCTGCCATA CCACTAGCAA GGATCCAGTA CCATGTCTCG GCAGATTCAA CAACACGAGG ATGTTCTGAG CCGAGGCCAC TGGACTATGA CAAACATGGG TCCGAGCCCG AGCTGGAGCT GTTCAACAGG TCTCGCACCT GGCGGCGCAG TGGTGTTCAA CGACAGCAAC TGGGGAGGTG ACGAGTCGTC ATCCTCTGGG GAAGTCCGAG CTTTCGCCGA GGATGCTGTC CACCTGCTGC TGCAGTGGAC AATGGCCGCC GCGCTCTTAC ACTTGCAGCT TTTGCCGAAG GGAGTTCTGC ACAGCCCAGG CACTGGGAGG GCACATGAAT GTCCATCGCC TCAAATGCGC CGAGGCCAAT GAGGTGGCTC TCCATCTCCA TCTCCGGCAC CACCAGACGC TCGCACCTGC TCCTCCTCCC TGCCGATCTC GCCTAGAGGC AGCGGCAGCA TCAGTTCCGT CGGAGCACGA GAATCTGGAC CTGGAGCTCA GACTCGGAAC TAGTGATTCC TTCCCGTATG CGACTGACTG ACCGTGAATC AAGATCATAG GACGACGTCA CATCACGAGT CGAGAATCTG AGTTTTCGTT CCATGTATAC AAGAGCGTTG TCGCCGGCCA TCGTCGGTGA CCGGTCTCTT GTCATTTCTT CTCATACGTC CAGTAATGAG CTACGAAGTT TTCATGTTCC TCTGTACAGC CCTTGTCATT GCGAGTCTCC GGCGATTTCC ATTCTTCGTT CTGCCTGATA GATCCTTGAA TCTTGCGATA GATCATGTCC GATGACAAGC TGTGAGAATT CCTTCGCTTT CCTTTTGTTC GTTCGTATTC GTACCGGTGG AATGACTCTG ACAAGGTTTC TTACAAAATC TCGCTCTCTG ATTGTATGAA TCCCCTGAAG ACTTTGCTTG AGTTTATATC GTGTT |
mRNA UTR + CDS |
| >Mp1g25140.1 AGTCATCTCG TGCTGCCATA CCACTAGCAA GGATCCAGTA CCATGTCTCG GCAGATTCAA CAACACGAGG ATGTTCTGAG CCGAGGCCAC TGGACTATGA CAAACATGGG TCCGAGCCCG AGCTGGAGCT GTTCAACAGG TCTCGCACCT GGCGGCGCAG TGGTGTTCAA CGACAGCAAC TGGGGAGGTG ACGAGTCGTC ATCCTCTGGG GAAGTCCGAG CTTTCGCCGA GGATGCTGTC CACCTGCTGC TGCAGTGGAC AATGGCCGCC GCGCTCTTAC ACTTGCAGCT TTTGCCGAAG GGAGTTCTGC ACAGCCCAGG CACTGGGAGG GCACATGAAT GTCCATCGCC TCAAATGCGC CGAGGCCAAT GAGGTGGCTC TCCATCTCCA TCTCCGGCAC CACCAGACGC TCGCACCTGC TCCTCCTCCC TGCCGATCTC GCCTAGAGGC AGCGGCAGCA TCAGTTCCGT CGGAGCACGA GAATCTGGAC CTGGAGCTCA GACTCGGAAC TAGTGATTCC TTCCCGTATG CGACTGACTG ACCGTGAATC AAGATCATAG GACGACGTCA CATCACGAGT CGAGAATCTG AGTTTTCGTT CCATGTATAC AAGAGCGTTG TCGCCGGCCA TCGTCGGTGA CCGGTCTCTT GTCATTTCTT CTCATACGTC CAGTAATGAG CTACGAAGTT TTCATGTTCC TCTGTACAGC CCTTGTCATT GCGAGTCTCC GGCGATTTCC ATTCTTCGTT CTGCCTGATA GATCCTTGAA TCTTGCGATA GATCATGTCC GATGACAAGC TGTGAGAATT CCTTCGCTTT CCTTTTGTTC GTTCGTATTC GTACCGGTGG AATGACTCTG ACAAGGTTTC TTACAAAATC TCGCTCTCTG ATTGTATGAA TCCCCTGAAG ACTTTGCTTG AGTTTATATC GTGTT |
CDS |
| >Mp1g25140.1 ATGCTGTCCA CCTGCTGCTG CAGTGGACAA TGGCCGCCGC GCTCTTACAC TTGCAGCTTT TGCCGAAGGG AGTTCTGCAC AGCCCAGGCA CTGGGAGGGC ACATGAATGT CCATCGCCTC AAATGCGCCG AGGCCAATGA GGTGGCTCTC CATCTCCATC TCCGGCACCA CCAGACGCTC GCACCTGCTC CTCCTCCCTG CCGATCTCGC CTAGAGGCAG CGGCAGCATC AGTTCCGTCG GAGCACGAGA ATCTGGACCT GGAGCTCAGA CTCGGAACTA GTGATTCCTT CCCGTATGCG ACTGACTGA |
Protein |
| >Mp1g25140.1 MLSTCCCSGQ WPPRSYTCSF CRREFCTAQA LGGHMNVHRL KCAEANEVAL HLHLRHHQTL APAPPPCRSR LEAAAASVPS EHENLDLELR LGTSDSFPYA TD |