Mp1g25720
Description
Annotation
| Database | ID | Description |
|---|---|---|
| ProSiteProfiles | PS51294 | Myb-type HTH DNA-binding domain profile. |
| CDD | cd00167 | SANT |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SUPERFAMILY | SSF46689 | Homeodomain-like |
| SMART | SM00717 | sant |
| Gene3D | G3DSA:1.20.58.1880 | - |
| Coils | Coil | Coil |
| Pfam | PF00249 | Myb-like DNA-binding domain |
| ProSiteProfiles | PS51293 | SANT domain profile. |
| PANTHER | PTHR44042 | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED |
| NCBIfam | TIGR01557 | myb-like DNA-binding domain, SHAQKYF class |
| KOG | KOG4167 | Predicted DNA-binding protein, contains SANT and ELM2 domains; N-term missing; C-term missing; [K] |
| MapolyID | Mapoly0811s0001 | - |
| GO | GO:0003677 | DNA binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| Mp1R-MYB22 | transcription factor, MYB | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g25720 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g25720.1 AGAGAGAGAG AGAGGCTGCG CTGTGTCGTG CTGTGCGCCC AGCGAGCGAC GACCTGGGTC AGGTGTTGGC CGGCATTGAA TTGAGGTACA GGTGCTGTCG ATGGTGGAGG GAGGTCCGAG ACTTGTCACC GATTTCGTCC GACACTTGAT GGAATTGCCT ACAGATTCAG CTACTACTTT CGTAATCAAC GTGAATGTGC TGAGCGATGG AGGCATGAGT CCTCAGAGGA GAGGAGGAGC GGCGTAGGGT TGTTGTTGTA GCTGCTGACT CGTGGTGCTG CTTTCCGTCC CCTGCGCGGC CGGCCGTCTT CCATAGCTGC TCGCCATCTG ATCCCTTCAC ATTAGAGGAA CTTGCAGCAG GCGAGTTCTG TTGCGCACCC TTCTGTTGAC CGTCTCTGCG TGCTCGTCCA CCTCCTCGTC GTCGTGGTGC TAGTTGGGGA GATTCGGCCA CCGGAGAACA GGAGAACAGG CGCCCATGGA TAAGAGTGAA CCCATGCAGA TGGCATCATC CGCCAGACCT TGCGCGAAAA CTGCCCCAGA GCAACATTAT GTGCAGATAG ATTCGTTGGG ATTGCAACAA CTTGAGCATC TGGAGAAGGA GCTTGAACAA GCCAAACAAA AGGTCAGAAT GTCCGAAACA GGTTGAAACT TGTCAGACTT GTGTTAACTT AACTGTCAGC ACTTTAGCCA TTCGACATTC TCTAAGACCG CAGATAATGG ATCGATCGTT CGAGCACAGA CCTCACGAAC CCCGAGTTCT GGTCAGCAAT TTCAATTAAG TAACTTTTCT GAAACCAACG ACAAAGTGCT TACGAGGTAT TTTTAGCGAA ATTTCTTCTC GACGCCGATA TCAGCTCATA AACATGAAGT AGTTGCAAGG TCTAGTGTTT TACCCTGTCT TTGGAGGCTG AGAGAGAGTC TGGCAATCGC CAGAACAGCG ACAGAGTGTC GCACGAACTG CTATGAGAAC CATGATGAAG TGATGATGAT GATCAAGCAA ATAGTGGGAG TGATAAATTA GAGAGAATCT CGCCCGCATC TGAAATTTTG TCCAGGGCTT GGTGCTTCGG TTTGAGCAGT ATATTCAAGG AAGACAGTCT CAGACAGAAT CCCTGAATGC CTGTCAGTAC GATGTCGCTT TGACAGATTC TAGTACTGAG AGCGCAGGAA CATCGGGAGA CATCTTCGCC AGAGAACAAG GTAAATCAAT TCAAGTCCAG TTGACTGAAA CCTTTCCTGC CTCCCTCCTT CGAAACCGTT CCACCTGCGA TTCGTTTGCA CTGCTTCGTT GTCACATAGC ATCCAACTGA ATCCTTCACT CGAGCGATGA GCTCCGCAAT CGCGCTGTGA TATTCTCGAT GCATGGGCAG GTCTCCGAAA GCAGATATTG GACCAACGAG GAACGGCAAC GGTTCAAGAA AGCTCTGAAG ACGTGAGTAA ACATGATGAT AGATGCAGCC TCAGGAATTT CCTTTAGCAG CAGGAAGAAT GTTGTGCCAA TCCTAATCTG AAAACAATGT CTCCGAGTTT TGTTCCGAAT TCCTGCATGC AATAGCTGCG AATGAATGAC GCTGTCAGAC GTGGACGGAT GATACAGCTT TGGGACCGAC TTTGCGGCTA TCGCAAAGTT CGTAGGAACG CGCAGTTCCA CTCAAGTCCG GACGCATGCG CAGAAGTATT ATGCTAAGCT GGTGCGTACT ACGCCCCCAT CCACTTGCTT GCGGCAGGCC TGACAGAGTT CGTCGAACCT TGTGCATGGT GCACTCGTCG GTTGCAACTT TGCTGTGCAG GTCTCGTGGA TCCCAGACTC TCACGAGTTT GTTTGTTAGC TCTCGTGCAG ATCAGAGACT ACAAACGTTC TGGCAAATCT CCGGCGACAG TCAAAGGCCG TGAGGAGAAA GCGACCGGAG CAACTCGACT CACGACGATG TAAAAATGCC AGACGACTGC TGCTTGCTCC ACATGCGCAA ATAATGCGGT CGCATTTCAG ACAGCATGCA TGTCACGTGG TCGGAGGAGG AACATCCTGC AAGCCAGGAG GAGGATTAGG AGGAGGAGGA GGAGGGAGGG AGGGAGGGGT ATCGCAGCTG GACTTGTTTC CTTCAGAGTC ATGAATGTAG TCGTAGTCAG TCAGTAGTCA CGAGAAATTT CACGCTACAT GATCCTTGGA CTGACGTCCT GCCCAAGGTG CTGCAATTTG ATAGATTACG TGAAAAATGA GTTTTTAGAA GCAGGCAATA ACGGCAGCCT AGCTACGTAG AGTAGGAGCT GTGTTGCGCC ACGCCATGCC ACGCCACGCC CAGTCTCGCT TAGCGAACGA GAGAAGTCTT CATTGTTACA GTTGTTACAG TTCTTCAAGA GAATAGAAGA TGGGGGAGAA TTTGGCAGCA CTGTCTATCC GCGCCATCTC AAGTTTCTGA ACCAGGTAAC ATTGGTCATG ATTTTGCCAT CAGATTTTAT TCAACAATAG AGGGGAAATA TATACAATCC TTTGCCCTGA CCGTGACCGT GATCCATTCA CAATTGTTGA ATACTTACAC TCACTCACTC ACTCACAACG TCATGGCCGA TGTTCCTTCC GACGAGCGAA TTGGGAGCTA CAATTGGGAG CATGTAACGT ATTAGCTTCG GAATCATCCG CATGCTTTCG AGCAGAAGAG GCCAGATTTA GCCAGATTGT CTCCTGACCT CCATCGCTGC TTCTCCGCTC GGGGCTCCGG TCCGTCGAGT GTGCAATCAA TCGTCGAGTG GCATCTGCAC AGTGTGCCAT GCGTGGTCCG CGGAAGCAAA CTGGAATTCG GAAGAATCCG ATCCCTGGAT CTACGAGGAA GCGAACGCGA CGAAGATCTG ATTGCGCTGC TGGACACGTG TCCCGCTGGA GATTGGAAGG ACTTCCCGAG GTCAGAGTCT TTCTATGCTC TTCGAATCTC GCACGCTGCT TCCCTCCTTC CGGTGCATGA ATGCGACTGG CCTTCGGGAA CGAGATCCTC AAGTCAATTC TCTTCGCTCT ACCTCTCTGG CATCCACCAA CCACTCCGGC TCCTCGTGCC GGCAGGAAGA CGCCAAGCGA TGGTCACGCA CGATATCATC TGGAAATAGA AACCGGTCCA TTCACGGATA CAAGATCGAG ATCGAGAGTG ATGTCACCAC TCACATGGAC GCGCATCCTG CCAGGACTTA CATTCCCGTT TTGGAGCATG ACTCCTTGGG TTACATTGCA TTCGTGTTTT CCAAATTTGT TCTCAACAGT ATAAAGGTCC CCAGACGAAG GCTCTGTGCT CCAAACGCTC CTGGCAAAGG TCG |
mRNA UTR + CDS |
| >Mp1g25720.1 AGAGAGAGAG AGAGGCTGCG CTGTGTCGTG CTGTGCGCCC AGCGAGCGAC GACCTGGGTC AGGTGTTGGC CGGCATTGAA TTGAGGTACA GGTGCTGTCG ATGGTGGAGG GAGGTCCGAG ACTTGTCACC GATTTCGTCC GACACTTGAT GGAATTGCCT ACAGATTCAG CTACTACTTT CGTAATCAAC GTGAATGTGC TGAGCGATGG AGGCATGAGT CCTCAGAGGA GAGGAGGAGC GGCGTAGGGT TGTTGTTGTA GCTGCTGACT CGTGGTGCTG CTTTCCGTCC CCTGCGCGGC CGGCCGTCTT CCATAGCTGC TCGCCATCTG ATCCCTTCAC ATTAGAGGAA CTTGCAGCAG GCGAGTTCTG TTGCGCACCC TTCTGTTGAC CGTCTCTGCG TGCTCGTCCA CCTCCTCGTC GTCGTGGTGC TAGTTGGGGA GATTCGGCCA CCGGAGAACA GGAGAACAGG CGCCCATGGA TAAGAGTGAA CCCATGCAGA TGGCATCATC CGCCAGACCT TGCGCGAAAA CTGCCCCAGA GCAACATTAT GTGCAGATAG ATTCGTTGGG ATTGCAACAA CTTGAGCATC TGGAGAAGGA GCTTGAACAA GCCAAACAAA AGATTCTAGT ACTGAGAGCG CAGGAACATC GGGAGACATC TTCGCCAGAG AACAAGGTCT CCGAAAGCAG ATATTGGACC AACGAGGAAC GGCAACGGTT CAAGAAAGCT CTGAAGACCT TTGGGACCGA CTTTGCGGCT ATCGCAAAGT TCGTAGGAAC GCGCAGTTCC ACTCAAGTCC GGACGCATGC GCAGAAGTAT TATGCTAAGC TGATCAGAGA CTACAAACGT TCTGGCAAAT CTCCGGCGAC AGTCAAAGGC CGTGAGGAGA AAGCGACCGG AGCAACTCGA CTCACGACGA TGTAAAAATG CCAGACGACT GCTGCTTGCT CCACATGCGC AAATAATGCG GTCGCATTTC AGACAGCATG CATGTCACGT GGTCGGAGGA GGAACATCCT GCAAGCCAGG AGGAGGATTA GGAGGAGGAG GAGGAGGGAG GGAGGGAGGG GTATCGCAGC TGGACTTGTT TCCTTCAGAG TCATGAATGT AGTCGTAGTC AGTCAGTAGT CACGAGAAAT TTCACGCTAC ATGATCCTTG GACTGACGTC CTGCCCAAGG TGCTGCAATT TGATAGATTA CGTGAAAAAT GAGTTTTTAG AAGCAGGCAA TAACGGCAGC CTAGCTACGT AGAGTAGGAG CTGTGTTGCG CCACGCCATG CCACGCCACG CCCAGTCTCG CTTAGCGAAC GAGAGAAGTC TTCATTGTTA CAGTTGTTAC AGTTCTTCAA GAGAATAGAA GATGGGGGAG AATTTGGCAG CACTGTCTAT CCGCGCCATC TCAAGTTTCT GAACCAGGTA ACATTGGTCA TGATTTTGCC ATCAGATTTT ATTCAACAAT AGAGGGGAAA TATATACAAT CCTTTGCCCT GACCGTGACC GTGATCCATT CACAATTGTT GAATACTTAC ACTCACTCAC TCACTCACAA CGTCATGGCC GATGTTCCTT CCGACGAGCG AATTGGGAGC TACAATTGGG AGCATGTAAC GTATTAGCTT CGGAATCATC CGCATGCTTT CGAGCAGAAG AGGCCAGATT TAGCCAGATT GTCTCCTGAC CTCCATCGCT GCTTCTCCGC TCGGGGCTCC GGTCCGTCGA GTGTGCAATC AATCGTCGAG TGGCATCTGC ACAGTGTGCC ATGCGTGGTC CGCGGAAGCA AACTGGAATT CGGAAGAATC CGATCCCTGG ATCTACGAGG AAGCGAACGC GACGAAGATC TGATTGCGCT GCTGGACACG TGTCCCGCTG GAGATTGGAA GGACTTCCCG AGGTCAGAGT CTTTCTATGC TCTTCGAATC TCGCACGCTG CTTCCCTCCT TCCGGTGCAT GAATGCGACT GGCCTTCGGG AACGAGATCC TCAAGTCAAT TCTCTTCGCT CTACCTCTCT GGCATCCACC AACCACTCCG GCTCCTCGTG CCGGCAGGAA GACGCCAAGC GATGGTCACG CACGATATCA TCTGGAAATA GAAACCGGTC CATTCACGGA TACAAGATCG AGATCGAGAG TGATGTCACC ACTCACATGG ACGCGCATCC TGCCAGGACT TACATTCCCG TTTTGGAGCA TGACTCCTTG GGTTACATTG CATTCGTGTT TTCCAAATTT GTTCTCAACA GTATAAAGGT CCCCAGACGA AGGCTCTGTG CTCCAAACGC TCCTGGCAAA GGTCG |
CDS |
| >Mp1g25720.1 ATGGATAAGA GTGAACCCAT GCAGATGGCA TCATCCGCCA GACCTTGCGC GAAAACTGCC CCAGAGCAAC ATTATGTGCA GATAGATTCG TTGGGATTGC AACAACTTGA GCATCTGGAG AAGGAGCTTG AACAAGCCAA ACAAAAGATT CTAGTACTGA GAGCGCAGGA ACATCGGGAG ACATCTTCGC CAGAGAACAA GGTCTCCGAA AGCAGATATT GGACCAACGA GGAACGGCAA CGGTTCAAGA AAGCTCTGAA GACCTTTGGG ACCGACTTTG CGGCTATCGC AAAGTTCGTA GGAACGCGCA GTTCCACTCA AGTCCGGACG CATGCGCAGA AGTATTATGC TAAGCTGATC AGAGACTACA AACGTTCTGG CAAATCTCCG GCGACAGTCA AAGGCCGTGA GGAGAAAGCG ACCGGAGCAA CTCGACTCAC GACGATGTAA |
Protein |
| >Mp1g25720.1 MDKSEPMQMA SSARPCAKTA PEQHYVQIDS LGLQQLEHLE KELEQAKQKI LVLRAQEHRE TSSPENKVSE SRYWTNEERQ RFKKALKTFG TDFAAIAKFV GTRSSTQVRT HAQKYYAKLI RDYKRSGKSP ATVKGREEKA TGATRLTTM |