Mp1g27300



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF04109 Autophagy protein ATG9
PANTHER PTHR13038 APG9 AUTOPHAGY 9
KEGG K17907 autophagy-related protein 9
KOG KOG2173 Integral membrane protein; C-term missing; [R]
MapolyID Mapoly0002s0148 -
GO GO:0005776 autophagosome
GO GO:0034497 protein localization to phagophore assembly site
GO GO:0044805 obsolete late nucleophagy
GO GO:0006914 autophagy
GO GO:0000422 autophagy of mitochondrion
GO GO:0000407 phagophore assembly site

Nomenclature

Gene symbol Product Transcript ID Status
MpATG9 Autophagy protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g27300.1 chr1:28450916..28457764 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g27300 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g27300 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.