Mp1g28560
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR12652 | PEROXISOMAL BIOGENESIS FACTOR 11 |
| Pfam | PF05648 | Peroxisomal biogenesis factor 11 (PEX11) |
| KOG | KOG4186 | Peroxisomal biogenesis protein (peroxin); [U] |
| MapolyID | Mapoly0002s0024 | - |
| GO | GO:0016559 | peroxisome fission |
| GO | GO:0005778 | peroxisomal membrane |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPEX11a | PEX11a, Peroxisome division/proliferation | Published |
Associated Literature (AI-based literature mining, Beta-version)
PEX11a, Peroxisome division/proliferation; Peroxisome division/proliferation (from nomenclature)
0 core 1 peripheral
Goto-Yamada, S., et al. (2022)
· Frontiers in Cell and Developmental Biology review citation background
M. polymorpha PEX11a (peroxin/peroxisome biogenesis)
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g28560 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g28560.1 GAGGAGGTCG GAGATTCAGC AGTGGCGGGC CGGATTGATG GTTGTGCGGG TGAGGATTGT GTCGTAGGGT CGTTTTTCTT TCAATCTGTG AATTTTGGTG GGAGGAAAGC GGACTAAATG GCCGAGAAGC ACCGGAAGAG AGCCTTCCTG GAGCATTTGG AGGCGTATTT GGCCAGGCGA GATGGCGTCG ATAAGGCTCT GAAGATTTTG CGATACTCCA GCAAATTGTG GCTCTCCAGT CCTCTGATTT CCTATGCCGA TCCCCTGGTC GTGAAGCGGG TGAAGGATTT TGAGTCCAGC GTTGGAACTA GTCGAAAAGC CTTCCGCCTC GGCAAGTTCG TGCAGGATGT GAACGCTTTG GGCAAAATCC CCTCCTACGC TTCCAGAGAT GGCCTGCTGG AATTTATTGC GTGCACCGGC GAGGGAATTT ACTACTTTGT GGAGCAATTC ATTTGGCTGG TATGTACTTC CAATTTATAT TCAATTTTTT GCAAATACTC GCAAATTTTT GATGGCATAT CATAGCGAGA TTGTGGTCTT CTGTAGCTTT TTAAATTCAG CTTCGAGTGA AAGAGAGGGA ATTTATTTTA AGGAATTGAG AACTTTGTTG TAACTTCCAA GCCGTGGGGT AGTCCGCTTC AAATTACCGT TGTTGCTTAG GGTACTGACG GCAGCTCATC GCGAGTGCCA GCGGTTTTGT TTATTTCTGA TGACACCTGC TAAATTAGTT TCCGCTGCAT AGTTAGATTA GTTAGATTAG TGCTCGTCTT TCACCGGAGC AGATCTCTTT TCCCGAGGTG ACATAATTGG ATGGGAATCG CTGCCAATGG AAGTAAAAAC GACGTTGATT CGTAGACTAG ATCTACCTCA AAGATAGAAA CTATTGGAAG TTACCTGGAA TTTATAGTAA CGTTTGCTTC CATCAGCCCG TATTTTGGAT GTCACGTGTT CGATAACGTA ACATCTAGTA CAAAGTTCGA TACTGGAGGA ACTCCTCCAG TATCGAACTT TGCATGATTT ATGTGGAAAG TCTGGCCTCC GTTTCAACCC CTGATTTAAT TGCTCCTCTG CATAACTGGG TTACGCCTCA GATGGTTTAT CTCGACTCAA AGGAATTCAC TCTACCTTTC TGACTGAAAG GTAGAGTGAA TTTAAATTGC GTGTTGTGCT GATCGCTTAC GAAAGCTCAT CATAAGTTGA AGCGGGTTTG TTTTTTTGGG ATAACAGCTG CAAAACCAAG ACTCGCTGGT TATTTAGATG CTCGTATATT TCATCAGGAA AATTTTCAAA TACCCTGAGG ATACGTAACA CCATAATAGA TGTGAATGGA GCACAACATT GATATCCGGA CCGAATCGAT TTGAAAGAAA GTGAAACACT TTCAGGATAT ACTTTTATTT TCGTTACTCT ATGTACGAGA TATTATGTGC TCTTTCAAGC TCCCACTTAG TAATCCTTTA GCACCCATTG TAGTCAGATG ATACAGATAG CTCGGTGCCC CTCGCAGATG GCTTTGATCT AGACCAGAGC AGAAATTAAC TGGAGCGTGT ACCTAGTTGT GAGGGTGATA TATTATAGAT CGAATCTGGT ATGTCGATGA ATCTGCATTC CCCTCAACAA CTGGAGAGGT TTTTCGGTTG ACTCTCATCT TCCTTCGACA GTAATCATTT GGAGTTGTTA ATGTATGTGC CGGGCCTCGC TTATTGGGAG CAGTGGGATT TACGAATATC TGGAAGCAAA TCTGATTCTT GATTTGTCCA ATTTGGATTT TATCCAGTTC GATCAGATCC AAGTTGGTGC AAATCTGTAA AGGAATGAGT ATCAGTGAAC TGCATATGGA AAAAATCTTA GGATCTTACG TCATCATGTT ATAATCCTCG ACGAAGAAGA AGCTGAAAAG AATCTCAGTA GGTCAGCTAG GTTGGTAGAC TTATATCGAA GTTTTTTTTT TTTTTTTTGG GACCTTTTGA GTGACACTAT TTAACGGGTG GGCTATTGGA ATTATCGTCA CTTCAGTGTC CCATCATTTG AAGCATACTA ACCGTTTATA AAGTGCAAAT ATTGCATTCT ACTTCCAGAG TTAATGGACG TTCCTTTAAT CTGCCCTCTT TGAGATTCTT CATTAAAAAA TAAAAATGAA TGCCTTTTTC AAAGTGTTGA AGGCATCCGT AGACTGATGA TACTAAGTTT TTTCTGGAAT TGTTAGCTAA GTTATTCAAG GACTGAAAAT GTCTGGTTGC TGAGTTGCTG AAAGGAAAGA GATCTGATCG TTAAAAATTC GTTGTTTGAG ATCATTGCAG GTTAAAGCCG GTGCAATTGA CAAACGCCAT TCGAAGGAGC TACAAAAGTG GAGTGCCTGG TCGGAGTTCA TTGGATACCT TGGAAGTGTT ACGTTGAAAT TTTTCCAAGT GTGGGCTATG CGTAGCAAAG AGGCCGCCCT CTTGAAAGGG TTGAATGCCT TGAATAAGGG CGAAGGTTTA GATGAGAAAG TAAGAATATC CAAGGAGCTG CGGATGGTGC GAGCCAAACG ATCGATGAAA ACTCTTTCCC TTGTACAGGA CCTGTCTGAC AGTTTGCTTG CTCTGAACGA CATTAAGGAC AATAAGGGTC CGTTGGCCAA ACCTTTTCTT CTTGCCTTTT CTGGTCTACT TTCTGCTTTG ATCAGCACCC ACAAAAACTG GAATAGCTGC TGATGGAACG CCTTCTCTTC GGTCTGCGTT TCTCGAACAC ATTAACATGT TTTGTATCAA TTTTAGGAAC GACGATTGTC GCATTTGTTG AGCTTGCTTC TCGCGAGAAG GGAAGTCTCG GTGTCAACCC CATCTACAGG GGTCGGCATC ACTAGATAAG CCTGGTCTTT GCTGCTCAGC CTTAAAGATG GAACCGAGTT ACAAATCTAC GCCGAGTTGG TGAGGAGTAT GGCACGGATA CATATGTGTC CAACAATTGT AAAGAATGAT CACTTGAGAA ACACAGTTAT CAATGGGGCA GGTAAACCTG CCCCATATAT ATTCAACCTG CATTGTACAT GATTCTGGTA ATTTATTTGA ACACTTACTC TGTTACG |
mRNA UTR + CDS |
| >Mp1g28560.1 GAGGAGGTCG GAGATTCAGC AGTGGCGGGC CGGATTGATG GTTGTGCGGG TGAGGATTGT GTCGTAGGGT CGTTTTTCTT TCAATCTGTG AATTTTGGTG GGAGGAAAGC GGACTAAATG GCCGAGAAGC ACCGGAAGAG AGCCTTCCTG GAGCATTTGG AGGCGTATTT GGCCAGGCGA GATGGCGTCG ATAAGGCTCT GAAGATTTTG CGATACTCCA GCAAATTGTG GCTCTCCAGT CCTCTGATTT CCTATGCCGA TCCCCTGGTC GTGAAGCGGG TGAAGGATTT TGAGTCCAGC GTTGGAACTA GTCGAAAAGC CTTCCGCCTC GGCAAGTTCG TGCAGGATGT GAACGCTTTG GGCAAAATCC CCTCCTACGC TTCCAGAGAT GGCCTGCTGG AATTTATTGC GTGCACCGGC GAGGGAATTT ACTACTTTGT GGAGCAATTC ATTTGGCTGG TTAAAGCCGG TGCAATTGAC AAACGCCATT CGAAGGAGCT ACAAAAGTGG AGTGCCTGGT CGGAGTTCAT TGGATACCTT GGAAGTGTTA CGTTGAAATT TTTCCAAGTG TGGGCTATGC GTAGCAAAGA GGCCGCCCTC TTGAAAGGGT TGAATGCCTT GAATAAGGGC GAAGGTTTAG ATGAGAAAGT AAGAATATCC AAGGAGCTGC GGATGGTGCG AGCCAAACGA TCGATGAAAA CTCTTTCCCT TGTACAGGAC CTGTCTGACA GTTTGCTTGC TCTGAACGAC ATTAAGGACA ATAAGGGTCC GTTGGCCAAA CCTTTTCTTC TTGCCTTTTC TGGTCTACTT TCTGCTTTGA TCAGCACCCA CAAAAACTGG AATAGCTGCT GATGGAACGC CTTCTCTTCG GTCTGCGTTT CTCGAACACA TTAACATGTT TTGTATCAAT TTTAGGAACG ACGATTGTCG CATTTGTTGA GCTTGCTTCT CGCGAGAAGG GAAGTCTCGG TGTCAACCCC ATCTACAGGG GTCGGCATCA CTAGATAAGC CTGGTCTTTG CTGCTCAGCC TTAAAGATGG AACCGAGTTA CAAATCTACG CCGAGTTGGT GAGGAGTATG GCACGGATAC ATATGTGTCC AACAATTGTA AAGAATGATC ACTTGAGAAA CACAGTTATC AATGGGGCAG GTAAACCTGC CCCATATATA TTCAACCTGC ATTGTACATG ATTCTGGTAA TTTATTTGAA CACTTACTCT GTTACG |
CDS |
| >Mp1g28560.1 ATGGCCGAGA AGCACCGGAA GAGAGCCTTC CTGGAGCATT TGGAGGCGTA TTTGGCCAGG CGAGATGGCG TCGATAAGGC TCTGAAGATT TTGCGATACT CCAGCAAATT GTGGCTCTCC AGTCCTCTGA TTTCCTATGC CGATCCCCTG GTCGTGAAGC GGGTGAAGGA TTTTGAGTCC AGCGTTGGAA CTAGTCGAAA AGCCTTCCGC CTCGGCAAGT TCGTGCAGGA TGTGAACGCT TTGGGCAAAA TCCCCTCCTA CGCTTCCAGA GATGGCCTGC TGGAATTTAT TGCGTGCACC GGCGAGGGAA TTTACTACTT TGTGGAGCAA TTCATTTGGC TGGTTAAAGC CGGTGCAATT GACAAACGCC ATTCGAAGGA GCTACAAAAG TGGAGTGCCT GGTCGGAGTT CATTGGATAC CTTGGAAGTG TTACGTTGAA ATTTTTCCAA GTGTGGGCTA TGCGTAGCAA AGAGGCCGCC CTCTTGAAAG GGTTGAATGC CTTGAATAAG GGCGAAGGTT TAGATGAGAA AGTAAGAATA TCCAAGGAGC TGCGGATGGT GCGAGCCAAA CGATCGATGA AAACTCTTTC CCTTGTACAG GACCTGTCTG ACAGTTTGCT TGCTCTGAAC GACATTAAGG ACAATAAGGG TCCGTTGGCC AAACCTTTTC TTCTTGCCTT TTCTGGTCTA CTTTCTGCTT TGATCAGCAC CCACAAAAAC TGGAATAGCT GCTGA |
Protein |
| >Mp1g28560.1 MAEKHRKRAF LEHLEAYLAR RDGVDKALKI LRYSSKLWLS SPLISYADPL VVKRVKDFES SVGTSRKAFR LGKFVQDVNA LGKIPSYASR DGLLEFIACT GEGIYYFVEQ FIWLVKAGAI DKRHSKELQK WSAWSEFIGY LGSVTLKFFQ VWAMRSKEAA LLKGLNALNK GEGLDEKVRI SKELRMVRAK RSMKTLSLVQ DLSDSLLALN DIKDNKGPLA KPFLLAFSGL LSALISTHKN WNSC |