Mp1g28830
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.170.15.10 | Proaerolysin, chain A, domain 3 |
| Gene3D | G3DSA:2.80.10.50 | - |
| SUPERFAMILY | SSF56973 | Aerolisin/ETX pore-forming domain |
| CDD | cd20215 | PFM_LSL-like |
| PANTHER | PTHR39244 | NATTERIN-4 |
| SUPERFAMILY | SSF50370 | Ricin B-like lectins |
| Pfam | PF03318 | Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Unannotated gene; listed in Table 1 among DEGs oppositely regulated by loss and induction of MpKAN.
0 core 1 peripheral
Briginshaw, L. N., et al. (2022)
· New Phytologist research experimental background
Unannotated gene; listed in Table 1 among DEGs oppositely regulated by loss and induction of MpKAN.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g28830 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g28830.1 ACAACAGACC CCCGCGAAGG AGATCCAACG ATCGTCTCGA CGCAGACTTT GCCAACGTAG CCTTCGATAA TGTATGTCAT TTTCTCTGAT CATAGCCGTG TTTTACTTAA TCTTATGTGT GCCGCTCTGA GCATCTCCCA ATTCCCGACT TGTTGCCCAC CTTCAAGCCA TATCACACCC GAAATCGTGG CGGAACTCGA CCGACCATCT CGACGCAGAG TTTGTGAACC TAGCCTTCGA TAATGTATGT CGTTATTCTC TGCTCATAGT CCCTATTCAT GGCTATTAAT TGCTTATTGT TCTGTGTTCC ACTTGCAGCA TTTCACGATG TCTGAATTGT ATATTCCTCC CAAGGAATTA TCCTTCCGCC TTCGTGGCTA CGTTAGCAAC TACGTCATCT TCGCCCGCAA TGAGCCGGAC CCTACAGTCT ATCACTACGG TGGAGAAACG TCCGCGGATC AATGGTTTCA GCTGATTCCT GGGACAGGGA ATCATGCAGG GTCCTATCTC ATCAAGAGCA AATGCACCGG GAAAGTGCTT TATTCGAGGA ATTCACCCGA TCCCCGGCTC AGTCAGATTG GTGGAGACGG GCAGTATGAG GACAACTGGT TCAGGTTCGA TGTCGGCACC GGCAAGCTCG CAAGCTACTT CCGAATTCGA AATGTCGGCA CTAACACCGT GCTCTACTCC CGCACACACG ACGACCCTAT GTTCTTCAAC TACCCAGCAG ATTACGAGGC CTCCGACGAC CAGTACTTCA CATTCGTCTT TGAAGATACG GAGATAGACA GAGTTGAGTA CCAAATTGAC CAGGCGACGG TTCTTGCCTC TGTTCCCGAG GTGATAGGTA CATCGAGCCT GAGGAACGAT AGCGATGTCG ATCAGACGGT CGAGTTCGAT TTTGAACGGA CCGAAACCCA ATCCTCCTCC TTTGATTACA CACTCGGGTT CACCATCACA GTGGGAGCCA GTGGAAAGGC AGGTATACCA TTTGTTGCCG AGGGTGAAGT TAAAGTCGAT GTTTCCAATT CCCACACGTT TAATTGGGGC ACGACATCCA GTGAATCAAA AACTTACTCG GTAAAGTTCC CTGCAGTTGC TCCCCCTCGC CATAAAATCA TTGGGACAGC CACCGTTACC CGCTCCAACA TCGAGATTCC ATTCACAGTC TATTCGAAAT CTGTGGCAAC GGGGTTCGAG GTTGCGACCC AAGGCATCTA TAAGGGTGTT ACCTACTGGA ACATCCAGAG CGAGGTCAAG CAAGAGTCTC TCTGAAGGAC CGATGCTGGG ATTCTGTGTT TGGATACTGA TGTTTCTGAT TTCGCTTTTG TCTCCGGTTT TACTCGGGGC TTTTACTCGT GCTATATTTC TGCCCGGCCA CCTCTCTACG AGAATAATGG TATGTAGTGC TCAAGTGTAA GTGGGTGTTT TACTACTTGC AGGAATGTAG TGGAAAACTT GGAGAATACT CTACAGTATT GAAGTACTTA CTTAGTTCGC CATTACACCA TCACTGGCGC AGCTACCATT CACTTTTGTT CAGTTCATAT GTAATTTAAT AAACTTTATT CTTATA |
mRNA UTR + CDS |
| >Mp1g28830.1 ACAACAGACC CCCGCGAAGG AGATCCAACG ATCGTCTCGA CGCAGACTTT GCCAACGTAG CCTTCGATAA TCATTTCACGATGTCTGAAT TGTATATTCC TCCCAAGGAA TTATCCTTCC GCCTTCGTGG CTACGTTAGC AACTACGTCA TCTTCGCCCG CAATGAGCCG GACCCTACAG TCTATCACTA CGGTGGAGAA ACGTCCGCGG ATCAATGGTT TCAGCTGATT CCTGGGACAG GGAATCATGC AGGGTCCTAT CTCATCAAGA GCAAATGCAC CGGGAAAGTG CTTTATTCGA GGAATTCACC CGATCCCCGG CTCAGTCAGA TTGGTGGAGA CGGGCAGTAT GAGGACAACT GGTTCAGGTT CGATGTCGGC ACCGGCAAGC TCGCAAGCTA CTTCCGAATT CGAAATGTCG GCACTAACAC CGTGCTCTAC TCCCGCACAC ACGACGACCC TATGTTCTTC AACTACCCAG CAGATTACGA GGCCTCCGAC GACCAGTACT TCACATTCGT CTTTGAAGAT ACGGAGATAG ACAGAGTTGA GTACCAAATT GACCAGGCGA CGGTTCTTGC CTCTGTTCCC GAGGTGATAG GTACATCGAG CCTGAGGAAC GATAGCGATG TCGATCAGAC GGTCGAGTTC GATTTTGAAC GGACCGAAAC CCAATCCTCC TCCTTTGATT ACACACTCGG GTTCACCATC ACAGTGGGAG CCAGTGGAAA GGCAGGTATA CCATTTGTTG CCGAGGGTGA AGTTAAAGTC GATGTTTCCA ATTCCCACAC GTTTAATTGG GGCACGACAT CCAGTGAATC AAAAACTTAC TCGGTAAAGT TCCCTGCAGT TGCTCCCCCT CGCCATAAAA TCATTGGGAC AGCCACCGTT ACCCGCTCCA ACATCGAGAT TCCATTCACA GTCTATTCGA AATCTGTGGC AACGGGGTTC GAGGTTGCGA CCCAAGGCAT CTATAAGGGT GTTACCTACT GGAACATCCA GAGCGAGGTC AAGCAAGAGT CTCTCTGAAG GACCGATGCT GGGATTCTGT GTTTGGATAC TGATGTTTCT GATTTCGCTT TTGTCTCCGG TTTTACTCGG GGCTTTTACT CGTGCTATAT TTCTGCCCGG CCACCTCTCT ACGAGAATAA TGGTATGTAG TGCTCAAGTG TAAGTGGGTG TTTTACTACT TGCAGGAATG TAGTGGAAAA CTTGGAGAAT ACTCTACAGT ATTGAAGTAC TTACTTAGTT CGCCATTACA CCATCACTGG CGCAGCTACC ATTCACTTTT GTTCAGTTCA TATGTAATTT AATAAACTTT ATTCTTATA |
CDS |
| >Mp1g28830.1 ATGTCTGAAT TGTATATTCC TCCCAAGGAA TTATCCTTCC GCCTTCGTGG CTACGTTAGC AACTACGTCA TCTTCGCCCG CAATGAGCCG GACCCTACAG TCTATCACTA CGGTGGAGAA ACGTCCGCGG ATCAATGGTT TCAGCTGATT CCTGGGACAG GGAATCATGC AGGGTCCTAT CTCATCAAGA GCAAATGCAC CGGGAAAGTG CTTTATTCGA GGAATTCACC CGATCCCCGG CTCAGTCAGA TTGGTGGAGA CGGGCAGTAT GAGGACAACT GGTTCAGGTT CGATGTCGGC ACCGGCAAGC TCGCAAGCTA CTTCCGAATT CGAAATGTCG GCACTAACAC CGTGCTCTAC TCCCGCACAC ACGACGACCC TATGTTCTTC AACTACCCAG CAGATTACGA GGCCTCCGAC GACCAGTACT TCACATTCGT CTTTGAAGAT ACGGAGATAG ACAGAGTTGA GTACCAAATT GACCAGGCGA CGGTTCTTGC CTCTGTTCCC GAGGTGATAG GTACATCGAG CCTGAGGAAC GATAGCGATG TCGATCAGAC GGTCGAGTTC GATTTTGAAC GGACCGAAAC CCAATCCTCC TCCTTTGATT ACACACTCGG GTTCACCATC ACAGTGGGAG CCAGTGGAAA GGCAGGTATA CCATTTGTTG CCGAGGGTGA AGTTAAAGTC GATGTTTCCA ATTCCCACAC GTTTAATTGG GGCACGACAT CCAGTGAATC AAAAACTTAC TCGGTAAAGT TCCCTGCAGT TGCTCCCCCT CGCCATAAAA TCATTGGGAC AGCCACCGTT ACCCGCTCCA ACATCGAGAT TCCATTCACA GTCTATTCGA AATCTGTGGC AACGGGGTTC GAGGTTGCGA CCCAAGGCAT CTATAAGGGT GTTACCTACT GGAACATCCA GAGCGAGGTC AAGCAAGAGT CTCTCTGA |
Protein |
| >Mp1g28830.1 MSELYIPPKE LSFRLRGYVS NYVIFARNEP DPTVYHYGGE TSADQWFQLI PGTGNHAGSY LIKSKCTGKV LYSRNSPDPR LSQIGGDGQY EDNWFRFDVG TGKLASYFRI RNVGTNTVLY SRTHDDPMFF NYPADYEASD DQYFTFVFED TEIDRVEYQI DQATVLASVP EVIGTSSLRN DSDVDQTVEF DFERTETQSS SFDYTLGFTI TVGASGKAGI PFVAEGEVKV DVSNSHTFNW GTTSSESKTY SVKFPAVAPP RHKIIGTATV TRSNIEIPFT VYSKSVATGF EVATQGIYKG VTYWNIQSEV KQESL |