Mp2g01420
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.160.20.10 | - |
| FunFam | G3DSA:2.160.20.10:FF:000008 | Pectinesterase |
| Pfam | PF01095 | Pectinesterase |
| ProSitePatterns | PS00503 | Pectinesterase signature 2. |
| PANTHER | PTHR31321 | ACYL-COA THIOESTER HYDROLASE YBHC-RELATED |
| SUPERFAMILY | SSF51126 | Pectin lyase-like |
| KEGG | K01051 | pectinesterase [EC:3.1.1.11] |
| MapolyID | Mapoly0028s0010 | - |
| GO | GO:0030599 | pectinesterase activity |
| GO | GO:0045490 | pectin catabolic process |
| GO | GO:0052689 | carboxylic ester hydrolase activity |
| GO | GO:0042545 | cell wall modification |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCE8.3 | Cell wall related protein | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
CE8 pectin methylesterase detected by mass spectrometry among the most abundant cell wall proteins (Table 3).
1 core 0 peripheral
Kolkas, H., et al. (2022)
· Frontiers in Plant Science research experimental subject
CE8 pectin methylesterase detected by mass spectrometry among the most abundant cell wall proteins (Table 3).
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g01420 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g01420.1 CTAACCCGTC TTCCCAGTAA CGCAGAGTGG CCGTGCTCCC TCGGGCAGCT CTGAGTGAGT CACCGAGAGA GGAAAGTAGC AGAGTACGAT CTGGTACACA TACGGATCGA GCTTCTCCCA GTCTGGGAGA GACCCAGTTC GAGAGCTGCA GCAGGGACAG TGCTGGTCTG AGTCGACAGA GCTGCTAGCT GCTGCTGCTC GTTGAGAGCT GCTCGGCTCG CCCAGCATGG CTGGCCGGCA GGTCTTCGTG TGTCTGCTGC TCGCTCTAGT GGCGGTTGCA GCTCAGGGAG CTTCTGTGGA CTCGAAAAAC GGGAAGTCAT GGACGGACGA GGAGATAGAG AAGGAGATGA TGGACTGGAT CGACCGCATG GGTAAGAAGG AGGAGTCGAA GGTCCATGCG CCCAAAATTA ACGTCAACTT TGCCACTTCA AAGTCTTCCC CAGCACCCGC TCCCGCTTCC AGGATCATTG TGGTGGATAG GAAGGGGAAG GGTGATTACA GGACTCTCAA GAAGGCCATT AAAGCCATTC CTAACGGAGA TAAGGAGAGG TGGACCATTA AAGTGAATCC AGGAGTCTAC AAGTATGTAA CCTCCTCACC GTCTTGGCTT TAAATTGTGC TACATTCCTC TCTCATGTGT TATACCAGCT GTTGGCGACG TAGGAAATTG AGTTACGTGA AGTTTAGCTT CAAGATGGGA GTTATCGTTC AGCAAAAATC TGAGAATAGG TTGCCGTATC GTGTGCATCT GCATGGGAGA AAGTCAAGAC ATTTGCCAAT GTCGCTGATT TTATTGCTGA CTCTGCCTTC TGTAGGGAAC GAGTGAAGAT TCCGAAGGAG AAGGGACCCA TCACCCTGCT GGGCTCTGGA CATCACAAGA CTAAGATCAC CTATAATTTG AACGCTGAAA AGGCCGGCGG GACTCTAAAA AGTGCCTCTG TTTCAGTAAA ATCTGACCAC TTCATCGCGA AGGACATTTC GTTCGAGGTA CTTTCTTACT CTGAGCTCAG TCCCTGAACA GAGCTTAGAT CTTCCTCCAG ATTATTCTGA TTTCGTTAAA TCAGACGTTA CAGTATAGAA GTGACTACTC TCTCTGTGAT TGTACGCCGG GAGAAACTGA GTACATCCGG CCTCAAAAGC CCTGTTGCTC CTGACCATTG TTGCCTCTGA ATGTACAGTT GTAAGTGAAC TCTGGGTCTG AATGCTAACC TGCACGCGAA GGCAGATTGC TTTGCTCTAT TTTACCGCAG CTACCGATAT TAATTGGATT GTCTAACCCA TCGTGATCCT GCAGAACACT TCGCCGGCGC CCAAACCTGG AGCTGTGGGT CAACAAGCTG TTGCCTTCGA AATTTCTGGT GACAAGGCTG CATTCTACCG CTGCGTATTC TTGGGTTACC AAGATACTTT GTATGATCGT TATGGACGTC ATTACTTCAA GGATTGCCGC ATCAGAGGAA GTATTGACTA CATTTTCGGA AACGGTCAAT CGTACTACGA GAAATGTACA TTGGAATCGG TTGCCGAGAC ATTCGGTTCG CTAACAGCTC AAAAGAGAAT GACGAAGAAG GAAGAGACTG GATACTCATT CGTTGACTGC AAAGTGAAGG GTACCGGATA CTTGTATTTG TCCAGAGCTT GGGGTCCATA CTCCCGTGTC GTGTTCATCA GAACTTACTT CGATGATATT ATCAGACCTG AGGGATGGTA CAACTGGGGA ATTCCCGGAA GAGAAAAGTG AGTTCTCTTT CAGTTTTCTT TTTTCTCACA CATACATTTT CCGTGATGTA TCTATGGCAT TGGTCGTGAA GACTTGTGCT AAATTTCTGA CTGTCACCAA TATGTGCAGG ACTGTTTTCT ACGGAGAGTA CAAGTGTTTC GGTCCTGGTG CGAACAGGCA GGGACGTGAG CAGTGGTCGT ACAACCTGAC TGCCAAGCAA GCTAAGCCTT TCATGACTGT TGACTGGATC GACGGAAAGG ACTGGCTTCC TAAGGGAAGA CAGTGAGGAC GAGAGAATGT GTCTTCAATT GTCCATAGTA ATCAACCGTA CACACGTCTT GAGCTTGGGA ATGTCAATTA GACATTGATC TTATGGCCGA GGACGCCGAT GGTTCATTGT TGACGAACAG AAGATTGTTC AAATTCGATC CGATTCGCGA GAAGCTAGAA GGTTTAATTA AAATGTCCAC CTAAAACTAG CAGCCCATTG ATTAGTTCTT TGAGTTTGAA GATTTATTCT TGGAAAGAAA AAAACTCCTC GTGGCAACGC CACGAGCTCA TTTGACAAAC GTGACTTGTC TTCATTTATC GACGATTGTA AGTACATATG AATTGTTTTA ATAAAACAGG GCAAAAAGCT CGACGCTACT GGAGAAAAGT CC |
mRNA UTR + CDS |
| >Mp2g01420.1 CTAACCCGTC TTCCCAGTAA CGCAGAGTGG CCGTGCTCCC TCGGGCAGCT CTGAGTGAGT CACCGAGAGA GGAAAGTAGC AGAGTACGAT CTGGTACACA TACGGATCGA GCTTCTCCCA GTCTGGGAGA GACCCAGTTC GAGAGCTGCA GCAGGGACAG TGCTGGTCTG AGTCGACAGA GCTGCTAGCT GCTGCTGCTC GTTGAGAGCT GCTCGGCTCG CCCAGCATGG CTGGCCGGCA GGTCTTCGTG TGTCTGCTGC TCGCTCTAGT GGCGGTTGCA GCTCAGGGAG CTTCTGTGGA CTCGAAAAAC GGGAAGTCAT GGACGGACGA GGAGATAGAG AAGGAGATGA TGGACTGGAT CGACCGCATG GGTAAGAAGG AGGAGTCGAA GGTCCATGCG CCCAAAATTA ACGTCAACTT TGCCACTTCA AAGTCTTCCC CAGCACCCGC TCCCGCTTCC AGGATCATTG TGGTGGATAG GAAGGGGAAG GGTGATTACA GGACTCTCAA GAAGGCCATT AAAGCCATTC CTAACGGAGA TAAGGAGAGG TGGACCATTA AAGTGAATCC AGGAGTCTAC AAGGAACGAG TGAAGATTCC GAAGGAGAAG GGACCCATCA CCCTGCTGGG CTCTGGACAT CACAAGACTA AGATCACCTA TAATTTGAAC GCTGAAAAGG CCGGCGGGAC TCTAAAAAGT GCCTCTGTTT CAGTAAAATC TGACCACTTC ATCGCGAAGG ACATTTCGTT CGAGAACACT TCGCCGGCGC CCAAACCTGG AGCTGTGGGT CAACAAGCTG TTGCCTTCGA AATTTCTGGT GACAAGGCTG CATTCTACCG CTGCGTATTC TTGGGTTACC AAGATACTTT GTATGATCGT TATGGACGTC ATTACTTCAA GGATTGCCGC ATCAGAGGAA GTATTGACTA CATTTTCGGA AACGGTCAAT CGTACTACGA GAAATGTACA TTGGAATCGG TTGCCGAGAC ATTCGGTTCG CTAACAGCTC AAAAGAGAAT GACGAAGAAG GAAGAGACTG GATACTCATT CGTTGACTGC AAAGTGAAGG GTACCGGATA CTTGTATTTG TCCAGAGCTT GGGGTCCATA CTCCCGTGTC GTGTTCATCA GAACTTACTT CGATGATATT ATCAGACCTG AGGGATGGTA CAACTGGGGA ATTCCCGGAA GAGAAAAGAC TGTTTTCTAC GGAGAGTACA AGTGTTTCGG TCCTGGTGCG AACAGGCAGG GACGTGAGCA GTGGTCGTAC AACCTGACTG CCAAGCAAGC TAAGCCTTTC ATGACTGTTG ACTGGATCGA CGGAAAGGAC TGGCTTCCTA AGGGAAGACA GTGAGGACGA GAGAATGTGT CTTCAATTGT CCATAGTAAT CAACCGTACA CACGTCTTGA GCTTGGGAAT GTCAATTAGA CATTGATCTT ATGGCCGAGG ACGCCGATGG TTCATTGTTG ACGAACAGAA GATTGTTCAA ATTCGATCCG ATTCGCGAGA AGCTAGAAGG TTTAATTAAA ATGTCCACCT AAAACTAGCA GCCCATTGAT TAGTTCTTTG AGTTTGAAGA TTTATTCTTG GAAAGAAAAA AACTCCTCGT GGCAACGCCA CGAGCTCATT TGACAAACGT GACTTGTCTT CATTTATCGA CGATTGTAAG TACATATGAA TTGTTTTAAT AAAACAGGGC AAAAAGCTCG ACGCTACTGG AGAAAAGTCC |
CDS |
| >Mp2g01420.1 ATGGCTGGCC GGCAGGTCTT CGTGTGTCTG CTGCTCGCTC TAGTGGCGGT TGCAGCTCAG GGAGCTTCTG TGGACTCGAA AAACGGGAAG TCATGGACGG ACGAGGAGAT AGAGAAGGAG ATGATGGACT GGATCGACCG CATGGGTAAG AAGGAGGAGT CGAAGGTCCA TGCGCCCAAA ATTAACGTCA ACTTTGCCAC TTCAAAGTCT TCCCCAGCAC CCGCTCCCGC TTCCAGGATC ATTGTGGTGG ATAGGAAGGG GAAGGGTGAT TACAGGACTC TCAAGAAGGC CATTAAAGCC ATTCCTAACG GAGATAAGGA GAGGTGGACC ATTAAAGTGA ATCCAGGAGT CTACAAGGAA CGAGTGAAGA TTCCGAAGGA GAAGGGACCC ATCACCCTGC TGGGCTCTGG ACATCACAAG ACTAAGATCA CCTATAATTT GAACGCTGAA AAGGCCGGCG GGACTCTAAA AAGTGCCTCT GTTTCAGTAA AATCTGACCA CTTCATCGCG AAGGACATTT CGTTCGAGAA CACTTCGCCG GCGCCCAAAC CTGGAGCTGT GGGTCAACAA GCTGTTGCCT TCGAAATTTC TGGTGACAAG GCTGCATTCT ACCGCTGCGT ATTCTTGGGT TACCAAGATA CTTTGTATGA TCGTTATGGA CGTCATTACT TCAAGGATTG CCGCATCAGA GGAAGTATTG ACTACATTTT CGGAAACGGT CAATCGTACT ACGAGAAATG TACATTGGAA TCGGTTGCCG AGACATTCGG TTCGCTAACA GCTCAAAAGA GAATGACGAA GAAGGAAGAG ACTGGATACT CATTCGTTGA CTGCAAAGTG AAGGGTACCG GATACTTGTA TTTGTCCAGA GCTTGGGGTC CATACTCCCG TGTCGTGTTC ATCAGAACTT ACTTCGATGA TATTATCAGA CCTGAGGGAT GGTACAACTG GGGAATTCCC GGAAGAGAAA AGACTGTTTT CTACGGAGAG TACAAGTGTT TCGGTCCTGG TGCGAACAGG CAGGGACGTG AGCAGTGGTC GTACAACCTG ACTGCCAAGC AAGCTAAGCC TTTCATGACT GTTGACTGGA TCGACGGAAA GGACTGGCTT CCTAAGGGAA GACAGTGA |
Protein |
| >Mp2g01420.1 MAGRQVFVCL LLALVAVAAQ GASVDSKNGK SWTDEEIEKE MMDWIDRMGK KEESKVHAPK INVNFATSKS SPAPAPASRI IVVDRKGKGD YRTLKKAIKA IPNGDKERWT IKVNPGVYKE RVKIPKEKGP ITLLGSGHHK TKITYNLNAE KAGGTLKSAS VSVKSDHFIA KDISFENTSP APKPGAVGQQ AVAFEISGDK AAFYRCVFLG YQDTLYDRYG RHYFKDCRIR GSIDYIFGNG QSYYEKCTLE SVAETFGSLT AQKRMTKKEE TGYSFVDCKV KGTGYLYLSR AWGPYSRVVF IRTYFDDIIR PEGWYNWGIP GREKTVFYGE YKCFGPGANR QGREQWSYNL TAKQAKPFMT VDWIDGKDWL PKGRQ |