Mp2g02350
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR35567 | MALATE DEHYDROGENASE (AFU_ORTHOLOGUE AFUA_2G13800) |
| Pfam | PF11937 | Protein of unknown function (DUF3455) |
| MapolyID | Mapoly0130s0042 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Protein of unknown function (DUF3455); listed in Table 1 as a candidate MpKAN-regulated DEG.
0 core 1 peripheral
Briginshaw, L. N., et al. (2022)
· New Phytologist research experimental background
Protein of unknown function (DUF3455); listed in Table 1 as a candidate MpKAN-regulated DEG.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g02350 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g02350.1 CCGTGGGCAC TGCAACGGAG CTCAATATTG ACTCAAAGTT TTATTAGCTC CGGACGTGTC CGCTTGCATA CAATCGGAAT CCGTAAGCTG TTAGTTCCTC TCAGGCTGCT GCATTGTCTT CGAAGAACTG CAGCTTTGCA CTCCAACTTT TCCAAGAAAA ACCGGAAGAA AAGTCACTGT CTCTTCGTGA CTTTCGAGCA CAATCTATCT ATCGGTCCGA AGATTCGCAT GAGGAATTAA GAACTTGCCT CCTACCATTT ACGGGAAACA AGTTTCCGAC ATCGTCTTCT TACGTACTCA CAACCATGAC GAGCTCGAGC GCGCTGGTTT CACTTCTAAG CTTGCTGGCG GCTCTGATGA TCTCCGTCGC CCAAGGAGCG TGCACCACAT TGTTGACAAC AGAGGATGCG CAGTACGTCT TTGTTCCCAA AGGTTTGGAC CCGGGGCTCT ATCCTCCGCA GGGAAATGTG CCCATAGCAC AGCTGTTCGC AGTGGGTGCC CAACATTACA CTGCCAACGG CACGGCCTGG GTCCTGACGA ACGCCACGGC TGATCTCTTC AATTCGCGCT TCGAGAAGGT TGGCGTCCAT TTCTACCTGC CGCAAGTTGA CCCCATGGGC GGTCAGCCTT CGTGGAAGAC AACGAGCCCT CCAAGTCTCG TCACCGCCAA GCGCCTATTC ACCGTGCAGG TTCACACCAA CAGCATCGCC TGGGCACTTC TGAAGGCTAC CAGTTCCGAA GATTCGTGGT AAATCTGAAG CTTCCATTCC CCGCCCATCG CCTCTGCATG TTTGATTACT TTTACCAATG TGAGTTTGTG TCAAGTGGAC GAAACCTCAG CCCCCGAGTA TTTTTTCATA TTACGAATGA AGACTTGATC TGAGTCCAAT TTGCGATCTG GAGATTAGAG TGTTTACTTA CGGCAATCCT ATCAAATTTC CTCCGTAGTT TGTGACTGGG GTTGGTATGT CACTGAAATT GCATTTACGG GACGTGAAGA GCTGAGATGC AAATTTGGCA CAATGTTGTG GATGTGAATG CAGCGGCTTA TTTGGCGATG TTACTTACGT TCAAAGGCTG TTCACACTGA ACGGCCTACC TCCTTCTACT GCGCCCACGA AGATTAATGC TACCTTCAGC TCGTCCTACA CATCGTTCTA CGTGTTCTAT AAGCAGCTGT AGACGAAGAC GGGTCATGAG GCGGAACGGC TGTTGGAGAT GGAGGATCCT CGGCATAAGT CTCAACGCCA GGATAACAAA TGTTCTGTTG CTCTACGCAG GAGCGGCCCA TGACCTGCAC GAAGGTTGCG ATAATTGGAT TGCAAGGGAA ATCTAATTCA CTTGCGAGGT GTGAGATGTC CGACGTCGAA GGCTCTCACC CATTTTTGTG GAGCAGATAT ATTTGACGGA TAGATCGTAT TCGAATCGGA TAAATTTTAT GGGGTGGTGA TTCTCTTCGT ATCTGAAACC TGAACAGATT GATTCTATGG AACTGGGTGC TCATTCAAAA GATCCATCGC GCTTTGAAGC AATCGTAAGT AGTCAAAATC TTTATAAAAG ACATGTAGAG CATAAATGTC AAAATCCACC GATTTACAAT ATCACCTGGG AACGCACGGG GATTTCATTA CGAGGATTCT TCGTGCTTTG AATAGGATTA GTGAAGGCTC AGGATGTAAC ACGTACATGC ACAGATAGAA TGAACGAAAC TGCATTATAA GGAGTGTTGG ATTTTTCAGA CTTATGCAAT AAATGTGAAG TGCCCCA |
mRNA UTR + CDS |
| >Mp2g02350.1 CCGTGGGCAC TGCAACGGAG CTCAATATTG ACTCAAAGTT TTATTAGCTC CGGACGTGTC CGCTTGCATA CAATCGGAAT CCGTAAGCTG TTAGTTCCTC TCAGGCTGCT GCATTGTCTT CGAAGAACTG CAGCTTTGCA CTCCAACTTT TCCAAGAAAA ACCGGAAGAA AAGTCACTGT CTCTTCGTGA CTTTCGAGCA CAATCTATCT ATCGGTCCGA AGATTCGCAT GAGGAATTAA GAACTTGCCT CCTACCATTT ACGGGAAACA AGTTTCCGAC ATCGTCTTCT TACGTACTCA CAACCATGAC GAGCTCGAGC GCGCTGGTTT CACTTCTAAG CTTGCTGGCG GCTCTGATGA TCTCCGTCGC CCAAGGAGCG TGCACCACAT TGTTGACAAC AGAGGATGCG CAGTACGTCT TTGTTCCCAA AGGTTTGGAC CCGGGGCTCT ATCCTCCGCA GGGAAATGTG CCCATAGCAC AGCTGTTCGC AGTGGGTGCC CAACATTACA CTGCCAACGG CACGGCCTGG GTCCTGACGA ACGCCACGGC TGATCTCTTC AATTCGCGCT TCGAGAAGGT TGGCGTCCAT TTCTACCTGC CGCAAGTTGA CCCCATGGGC GGTCAGCCTT CGTGGAAGAC AACGAGCCCT CCAAGTCTCG TCACCGCCAA GCGCCTATTC ACCGTGCAGG TTCACACCAA CAGCATCGCC TGGGCACTTC TGAAGGCTAC CAGTTCCGAA GATTCGTGCG GCTTATTTGG CGATGTTACT TACGTTCAAA GGCTGTTCAC ACTGAACGGC CTACCTCCTT CTACTGCGCC CACGAAGATT AATGCTACCT TCAGCTCGTC CTACACATCG TTCTACGTGT TCTATAAGCA GCTGTAGACG AAGACGGGTC ATGAGGCGGA ACGGCTGTTG GAGATGGAGG ATCCTCGGCA TAAGTCTCAA CGCCAGGATA ACAAATGTTC TGTTGCTCTA CGCAGGAGCG GCCCATGACC TGCACGAAGG TTGCGATAAT TGGATTGCAA GGGAAATCTA ATTCACTTGC GAGGTGTGAG ATGTCCGACG TCGAAGGCTC TCACCCATTT TTGTGGAGCA GATATATTTG ACGGATAGAT CGTATTCGAA TCGGATAAAT TTTATGGGGT GGTGATTCTC TTCGTATCTG AAACCTGAAC AGATTGATTC TATGGAACTG GGTGCTCATT CAAAAGATCC ATCGCGCTTT GAAGCAATCG TAAGTAGTCA AAATCTTTAT AAAAGACATG TAGAGCATAA ATGTCAAAAT CCACCGATTT ACAATATCAC CTGGGAACGC ACGGGGATTT CATTACGAGG ATTCTTCGTG CTTTGAATAG GATTAGTGAA GGCTCAGGAT GTAACACGTA CATGCACAGA TAGAATGAAC GAAACTGCAT TATAAGGAGT GTTGGATTTT TCAGACTTAT GCAATAAATG TGAAGTGCCC CA |
CDS |
| >Mp2g02350.1 ATGACGAGCT CGAGCGCGCT GGTTTCACTT CTAAGCTTGC TGGCGGCTCT GATGATCTCC GTCGCCCAAG GAGCGTGCAC CACATTGTTG ACAACAGAGG ATGCGCAGTA CGTCTTTGTT CCCAAAGGTT TGGACCCGGG GCTCTATCCT CCGCAGGGAA ATGTGCCCAT AGCACAGCTG TTCGCAGTGG GTGCCCAACA TTACACTGCC AACGGCACGG CCTGGGTCCT GACGAACGCC ACGGCTGATC TCTTCAATTC GCGCTTCGAG AAGGTTGGCG TCCATTTCTA CCTGCCGCAA GTTGACCCCA TGGGCGGTCA GCCTTCGTGG AAGACAACGA GCCCTCCAAG TCTCGTCACC GCCAAGCGCC TATTCACCGT GCAGGTTCAC ACCAACAGCA TCGCCTGGGC ACTTCTGAAG GCTACCAGTT CCGAAGATTC GTGCGGCTTA TTTGGCGATG TTACTTACGT TCAAAGGCTG TTCACACTGA ACGGCCTACC TCCTTCTACT GCGCCCACGA AGATTAATGC TACCTTCAGC TCGTCCTACA CATCGTTCTA CGTGTTCTAT AAGCAGCTGT AG |
Protein |
| >Mp2g02350.1 MTSSSALVSL LSLLAALMIS VAQGACTTLL TTEDAQYVFV PKGLDPGLYP PQGNVPIAQL FAVGAQHYTA NGTAWVLTNA TADLFNSRFE KVGVHFYLPQ VDPMGGQPSW KTTSPPSLVT AKRLFTVQVH TNSIAWALLK ATSSEDSCGL FGDVTYVQRL FTLNGLPPST APTKINATFS SSYTSFYVFY KQL |