Mp2g03280



Description

Annotation

Database ID Description
Pfam PF03055 Retinal pigment epithelial membrane protein
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR10543 BETA-CAROTENE DIOXYGENASE
KEGG K17912 9-cis-beta-carotene 9',10'-cleaving dioxygenase [EC:1.13.11.68]
KOG KOG1285 Beta, beta-carotene 15,15'-dioxygenase and related enzymes; [Q]
MapolyID Mapoly0075s0089 -
GO GO:0010436 carotenoid dioxygenase activity
GO GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO GO:0045549 9-cis-epoxycarotenoid dioxygenase activity
GO GO:0016121 carotene catabolic process

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

CAROTENOID CLEAVAGE DIOXYGENASE 7 (Mp2g03280); CRISPR KO affected gemmae, unique DEGs, ~3.6x MpNCED. Focal SL-pathway gene.

1 core 2 peripheral

Jibran, R., et al. (2024b) · Frontiers in Plant Science  research experimental subject
CAROTENOID CLEAVAGE DIOXYGENASE 7 (Mp2g03280); CRISPR KO affected gemmae, unique DEGs, ~3.6x MpNCED. Focal SL-pathway gene.
Poveda J. (2025) · Frontiers in plant science  other citation background
Editorial cites MpCCD7 (carotenoid cleavage dioxygenase 7) as a key player in bud release, germination and growth in response to variable light.
Briginshaw, L. N., et al. (2022) · New Phytologist  research experimental background
MpCCD7 (9-cis-beta-carotene cleaving dioxygenase); listed in Table 1 as a candidate MpKAN-regulated DEG.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g03280.1 chr2:4017519..4022337 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g03280 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g03280 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.