Mp2g03850
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF03514 | GRAS domain family |
| PANTHER | PTHR31636 | OSJNBA0084A10.13 PROTEIN-RELATED |
| ProSiteProfiles | PS50985 | GRAS family profile. |
| KEGG | K14494 | DELLA protein |
| MapolyID | Mapoly0031s0041 | - |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0003700 | DNA-binding transcription factor activity |
| GO | GO:0005634 | nucleus |
| GO | GO:0043565 | sequence-specific DNA binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpGRAS4 | transcription factor, GRAS | Published |
Associated Literature (AI-based literature mining, Beta-version)
transcription factor, GRAS (from nomenclature)
0 core 1 peripheral
Flores-Sandoval, E., et al. (2018b)
· Frontiers in Plant Science research sequence comparator
Described as the LAS ortholog in cross-species comparison of meristem-related TFs.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g03850 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g03850.1 TCGACTGTAC CTGGTACACC TGCTGCGTCC TTCCTAGGCC TTCTTGTTCA GTGCTCCGCT CTCCGGAGCC ATTCCCATCG ATGTTCATAT TGCAACGCGT ACGTTAGCTA CGAGTGGAGT GGAGTGCAGT GGAGTGGAGT GGAGTGCAGT GCAGTGCAGT GAAGTGCAGC GCAGTGCGCC GGGCTGGGCC TCTCTCACTG TCTCTCTCTC TCTCTCTCGC CGCTTCTGTG TGTGCGCCGA ACATTGTGAA TTTGCTCTCG TTGCGTTTAT GTTTGCTGCT ATGCTACCTC TCACTTCATT CCTGTTTTTC GAATTCCGCT ATCGCCTCCC GTAGCCAGCA GCAGCAGCAG CACAGGCAGC AGCAGGAGGA GGAAGAGGCA GCAGGCCAGC AGGCAGGCAG ACAGCAGGCA GGCCAGCAGC AGCAGCTGCT GCTGCAAATT TCTCTTATAT AAAGGAAGCA GCCCTAGGGG CCGGGAGTTC ATTCACTATT TAGGAACTCG GTCTCGACCT CAAACCTCGG TATGATCCGC ATCCCACCGC ACCATGAAGC ACTCGCTCGT CGCGTGGGCT GCGGGACCTT GTGCTGCTGG AGGAGGTCGA TGCCGCTGAG GTCGGGACGC ACTCATGCCA TTCACGTAGC CCCATCCCAG AGCTTGTGAT CTCGCGCTGC AGCAGCCGGT TTGAACATGG CAGGGTCTTA AGGTCATGAG CGTATATGAT CCCCGAGGAC TTGCGGAATT TTCCAGGAAG AAGGGGCCTG GATGTGAAAC GAAGGCCCGG CGATCTGCAG ATAAGGGAAG CGCAGCAATT TGCTGAGTAT GGGTGAGGGA CAGTCGTTAG TCACAGAAGC GGGCGAAGAA GCTAGAGGCA CCGGACTCAT TCCCACAGAC AAAGCCATCA GGGTAGGGGT TCAGCTCAAG TACGAACAAG GCCACGGATC CTCCGCCTCC CTAGACATCT CCATCTGCAA ATTATAGGAT GCGCCCGAGC TCTCGAGCAT TTCGTCCACA GGTTTAGAGA CTCTCGTCGA TCCCAGGCGA CGGGTTTATT TTTCTAGCTC AGACGAAGAC GTCGACGAGG GGTTTAGAAC TCGGAGGATT TTTGCTTGCC TCCCACCACC GCGTCCGCTC GGGGTCCCGG ACAATCACCG TCTCGCGCAG TCGAGTCGAG TCAAGTCCAG TGGCTTCGAT TTGTTTTGGG AACCATCAGA AGTAGCAGTT AGCTCGTATC GAAGCATATC AGAGAGCAGT CGACGAAATT TGGGCAGCGG CAGCGCGTCT CGGCGCACCG TGCACGCGTA CTTGCTTGCG TGCGTGCGTG CATCCATCCA AGGGATTTCA CGTCCCACGC GCAGTGTCGG TGCTCGGGGA CTCGAGAAGG CGCAGCTCGC GAGCGGAGTC CGGAGTCGGC GAAGGCGGCG AGGGGGTAGA ATTCCAGATT TCTCGAGCGC CGTCGGGGGC AGCGTAGCGC TAGCCATCCA GGGGGAGGAG CATTGGGGGG GTGAGAATTC AGGTCGCGGG CAGCGGGGCG AGGGCGAGGC GCGCCGAATT GGGACATGAG GGGGCGATCA GGGGCGGAGC GGGGGCTCAG AGACAGCTAG AGGGCCGCAG TCTGCCGGCG CGCCTCATAC CCATGAGATG TGTCCCCCTT GGAGACTGAA GGAGGGTAGT AAAATATGCA CTCTCTGTCC CTGCTGCAAA CAACCCTCAA TCGCCACCAC AACCCGTTCG TGTGCTCGCC GTTCCTCCTC CATGAAATGC TCAGTTCAGT CGATGCAAAA CTCTCGGCAG CATTGGAGCC AGCGTCAGCG TCAGCAGCAC GCGGAAGAGA TTCGCGCGCC CTGGACGGCA GCCCGCTGCG CGAGCTGATC TTCGAGTGCG CGCAGGCGGT GGCGCGCCAC GACCTGGACC GGTCGCTGGG AATCCTGCGC TACCTGGCCA GCAAAGTGCC CGAGGCCGGC GACGCGGGCG AGCGCGTCGG GGCCTACTTC ACGCGCGCGC TGGCCTGCCG GGTGGCGAAG CGCCTGGAGG CCGCGGGCGG CAACGGGCCG GAGGGCGATC ACTCGGAGCT GCTGGCCTCG CTGCGGATCC CCGACGCGCC GTCGCAGGAG GAGATTCACG CCGCCTACTT GGCGCTCAAT CGCGTCACGC CGTTCCTGCG CTTCGCCCAC CTGACGGCCA ATCAGGCCAT CGTGGAGGAG ATGGAGGGCG AGGACATAGT TCATTTAGTG GATTTCGAGA TTATGCAGGG CGTGCAATGG CCGCCCCTCA TGCAGGCGCT GGCCGAGCGG CCCGGCGGGC CGCCGCACCT GCGCCTGACA GGAATTGGCT CGTCTCCGGA CATCCTTCGG CAGACGGGCA ACCGGCTGGC GGATTTCGCC CGCACCCTCA ACCTGCCGTT CGAGTTCCTG CCGCTGGTGG CCGGCGGCAT CGAGCAGGTG AGCGTGGACA TGTTCAGCAA GCGCGAGGGC GAGGTGGTGG CGGTGAACTG CGTGCTGCAG CTGAACCGCT TCCTCGAGAA GGGCCCGGAC TCGCTCAAGG CGTTCCTGGA GATGATCCAG ACGCTGCGGC CCAAGGTGGT GACGCTGGCC GAGCGCGAGG CCAACCACAA TCAGCCGCAG TTCCTCGACA GATTCGGCGA GGCCTACCGC CACTACGCCA TCATTTTCGA CTCGCTGGAG GCTACTCTTC CCCCGAGAAG TCCCGACCGC GTGACAGTCG AGGAAGTGTG GTTCGGCCGG GAGATCGCCA ACATCGTCTC GTGCGATGGC GCGGACTGGG TCGAGCGGCA CGAGACGTTC GAGCAGTGGC GGGAGATCAT GGAAAGCGCA GGATTCCACT CGTTGCCCCC CAGCACCTTC GCCCTCGCCC AGGCCAAACT CTTACTTAGA TATTATCCCT CCGAGGGCTA CCGGCTCTTT GAGAACGACG ACTGTCTTTT GCTTGGCTGG CAGGACCACC CATTATTTAC AGTCTCTTCA TGGCACTGAA CGACGATTAC GACGACGACG ACGACGACAT CGACAGTGGG GGCATTGGCA TCCACTACCC CCCCTCTCTC TCTCTCCCGT CTCGGGGATC AATATCCGAA GACGCATTTC GCCGGAGCCT TCGAGTATTG CTCTCCGAGC TGAGGAGCCC CTCAATGTGC CGGTCTACAC CTAAACCAGT CAGGTTGGCT TTTTTGCGAT TCATGAGAGG CTATCACAAG AGCCCAAGGA AACGCCATGC ACTCAATATG GCGAAATTCT TCTTCATTTC AGATACATGT GGGATCTTGA TAATCAGGCG GTACCCAACT AGCTCATCAG ATTAAGGAAA AAGGTGGGTG TGCATACGCT GTGGTTTTCA ACACTCCCAT CTCATACAGT AACAAGATTA CATTGTTTTT CTCCTGGATT GCAGGATGCA TACATAAAAG AGAGTTACTT TCTCTTTGTC GTCC |
mRNA UTR + CDS |
| >Mp2g03850.1 TCGACTGTAC CTGGTACACC TGCTGCGTCC TTCCTAGGCC TTCTTGTTCA GTGCTCCGCT CTCCGGAGCC ATTCCCATCG ATGTTCATAT TGCAACGCGT ACGTTAGCTA CGAGTGGAGT GGAGTGCAGT GGAGTGGAGT GGAGTGCAGT GCAGTGCAGT GAAGTGCAGC GCAGTGCGCC GGGCTGGGCC TCTCTCACTG TCTCTCTCTC TCTCTCTCGC CGCTTCTGTG TGTGCGCCGA ACATTGTGAA TTTGCTCTCG TTGCGTTTAT GTTTGCTGCT ATGCTACCTC TCACTTCATT CCTGTTTTTC GAATTCCGCT ATCGCCTCCC GTAGCCAGCA GCAGCAGCAG CACAGGCAGC AGCAGGAGGA GGAAGAGGCA GCAGGCCAGC AGGCAGGCAG ACAGCAGGCA GGCCAGCAGC AGCAGCTGCT GCTGCAAATT TCTCTTATAT AAAGGAAGCA GCCCTAGGGG CCGGGAGTTC ATTCACTATT TAGGAACTCG GTCTCGACCT CAAACCTCGG TATGATCCGC ATCCCACCGC ACCATGAAGC ACTCGCTCGT CGCGTGGGCT GCGGGACCTT GTGCTGCTGG AGGAGGTCGA TGCCGCTGAG GTCGGGACGC ACTCATGCCA TTCACGTAGC CCCATCCCAG AGCTTGTGAT CTCGCGCTGC AGCAGCCGGT TTGAACATGG CAGGGTCTTA AGGTCATGAG CGTATATGAT CCCCGAGGAC TTGCGGAATT TTCCAGGAAG AAGGGGCCTG GATGTGAAAC GAAGGCCCGG CGATCTGCAG ATAAGGGAAG CGCAGCAATT TGCTGAGTAT GGGTGAGGGA CAGTCGTTAG TCACAGAAGC GGGCGAAGAA GCTAGAGGCA CCGGACTCAT TCCCACAGAC AAAGCCATCA GGGTAGGGGT TCAGCTCAAG TACGAACAAG GCCACGGATC CTCCGCCTCC CTAGACATCT CCATCTGCAA ATTATAGGAT GCGCCCGAGC TCTCGAGCAT TTCGTCCACA GGTTTAGAGA CTCTCGTCGA TCCCAGGCGA CGGGTTTATT TTTCTAGCTC AGACGAAGAC GTCGACGAGG GGTTTAGAAC TCGGAGGATT TTTGCTTGCC TCCCACCACC GCGTCCGCTC GGGGTCCCGG ACAATCACCG TCTCGCGCAG TCGAGTCGAG TCAAGTCCAG TGGCTTCGAT TTGTTTTGGG AACCATCAGA AGTAGCAGTT AGCTCGTATC GAAGCATATC AGAGAGCAGT CGACGAAATT TGGGCAGCGG CAGCGCGTCT CGGCGCACCG TGCACGCGTA CTTGCTTGCG TGCGTGCGTG CATCCATCCA AGGGATTTCA CGTCCCACGC GCAGTGTCGG TGCTCGGGGA CTCGAGAAGG CGCAGCTCGC GAGCGGAGTC CGGAGTCGGC GAAGGCGGCG AGGGGGTAGA ATTCCAGATT TCTCGAGCGC CGTCGGGGGC AGCGTAGCGC TAGCCATCCA GGGGGAGGAG CATTGGGGGG GTGAGAATTC AGGTCGCGGG CAGCGGGGCG AGGGCGAGGC GCGCCGAATT GGGACATGAG GGGGCGATCA GGGGCGGAGC GGGGGCTCAG AGACAGCTAG AGGGCCGCAG TCTGCCGGCG CGCCTCATAC CCATGAGATG TGTCCCCCTT GGAGACTGAA GGAGGGTAGT AAAATATGCA CTCTCTGTCC CTGCTGCAAA CAACCCTCAA TCGCCACCAC AACCCGTTCG TGTGCTCGCC GTTCCTCCTC CATGAAATGC TCAGTTCAGT CGATGCAAAA CTCTCGGCAG CATTGGAGCC AGCGTCAGCG TCAGCAGCAC GCGGAAGAGA TTCGCGCGCC CTGGACGGCA GCCCGCTGCG CGAGCTGATC TTCGAGTGCG CGCAGGCGGT GGCGCGCCAC GACCTGGACC GGTCGCTGGG AATCCTGCGC TACCTGGCCA GCAAAGTGCC CGAGGCCGGC GACGCGGGCG AGCGCGTCGG GGCCTACTTC ACGCGCGCGC TGGCCTGCCG GGTGGCGAAG CGCCTGGAGG CCGCGGGCGG CAACGGGCCG GAGGGCGATC ACTCGGAGCT GCTGGCCTCG CTGCGGATCC CCGACGCGCC GTCGCAGGAG GAGATTCACG CCGCCTACTT GGCGCTCAAT CGCGTCACGC CGTTCCTGCG CTTCGCCCAC CTGACGGCCA ATCAGGCCAT CGTGGAGGAG ATGGAGGGCG AGGACATAGT TCATTTAGTG GATTTCGAGA TTATGCAGGG CGTGCAATGG CCGCCCCTCA TGCAGGCGCT GGCCGAGCGG CCCGGCGGGC CGCCGCACCT GCGCCTGACA GGAATTGGCT CGTCTCCGGA CATCCTTCGG CAGACGGGCA ACCGGCTGGC GGATTTCGCC CGCACCCTCA ACCTGCCGTT CGAGTTCCTG CCGCTGGTGG CCGGCGGCAT CGAGCAGGTG AGCGTGGACA TGTTCAGCAA GCGCGAGGGC GAGGTGGTGG CGGTGAACTG CGTGCTGCAG CTGAACCGCT TCCTCGAGAA GGGCCCGGAC TCGCTCAAGG CGTTCCTGGA GATGATCCAG ACGCTGCGGC CCAAGGTGGT GACGCTGGCC GAGCGCGAGG CCAACCACAA TCAGCCGCAG TTCCTCGACA GATTCGGCGA GGCCTACCGC CACTACGCCA TCATTTTCGA CTCGCTGGAG GCTACTCTTC CCCCGAGAAG TCCCGACCGC GTGACAGTCG AGGAAGTGTG GTTCGGCCGG GAGATCGCCA ACATCGTCTC GTGCGATGGC GCGGACTGGG TCGAGCGGCA CGAGACGTTC GAGCAGTGGC GGGAGATCAT GGAAAGCGCA GGATTCCACT CGTTGCCCCC CAGCACCTTC GCCCTCGCCC AGGCCAAACT CTTACTTAGA TATTATCCCT CCGAGGGCTA CCGGCTCTTT GAGAACGACG ACTGTCTTTT GCTTGGCTGG CAGGACCACC CATTATTTAC AGTCTCTTCA TGGCACTGAA CGACGATTAC GACGACGACG ACGACGACAT CGACAGTGGG GGCATTGGCA TCCACTACCC CCCCTCTCTC TCTCTCCCGT CTCGGGGATC AATATCCGAA GACGCATTTC GCCGGAGCCT TCGAGTATTG CTCTCCGAGC TGAGGAGCCC CTCAATGTGC CGGTCTACAC CTAAACCAGT CAGGTTGGCT TTTTTGCGAT TCATGAGAGG CTATCACAAG AGCCCAAGGA AACGCCATGC ACTCAATATG GCGAAATTCT TCTTCATTTC AGATACATGT GGGATCTTGA TAATCAGGCG GTACCCAACT AGCTCATCAG ATTAAGGAAA AAGGTGGGTG TGCATACGCT GTGGTTTTCA ACACTCCCAT CTCATACAGT AACAAGATTA CATTGTTTTT CTCCTGGATT GCAGGATGCA TACATAAAAG AGAGTTACTT TCTCTTTGTC GTCC |
CDS |
| >Mp2g03850.1 ATGCACTCTC TGTCCCTGCT GCAAACAACC CTCAATCGCC ACCACAACCC GTTCGTGTGC TCGCCGTTCC TCCTCCATGA AATGCTCAGT TCAGTCGATG CAAAACTCTC GGCAGCATTG GAGCCAGCGT CAGCGTCAGC AGCACGCGGA AGAGATTCGC GCGCCCTGGA CGGCAGCCCG CTGCGCGAGC TGATCTTCGA GTGCGCGCAG GCGGTGGCGC GCCACGACCT GGACCGGTCG CTGGGAATCC TGCGCTACCT GGCCAGCAAA GTGCCCGAGG CCGGCGACGC GGGCGAGCGC GTCGGGGCCT ACTTCACGCG CGCGCTGGCC TGCCGGGTGG CGAAGCGCCT GGAGGCCGCG GGCGGCAACG GGCCGGAGGG CGATCACTCG GAGCTGCTGG CCTCGCTGCG GATCCCCGAC GCGCCGTCGC AGGAGGAGAT TCACGCCGCC TACTTGGCGC TCAATCGCGT CACGCCGTTC CTGCGCTTCG CCCACCTGAC GGCCAATCAG GCCATCGTGG AGGAGATGGA GGGCGAGGAC ATAGTTCATT TAGTGGATTT CGAGATTATG CAGGGCGTGC AATGGCCGCC CCTCATGCAG GCGCTGGCCG AGCGGCCCGG CGGGCCGCCG CACCTGCGCC TGACAGGAAT TGGCTCGTCT CCGGACATCC TTCGGCAGAC GGGCAACCGG CTGGCGGATT TCGCCCGCAC CCTCAACCTG CCGTTCGAGT TCCTGCCGCT GGTGGCCGGC GGCATCGAGC AGGTGAGCGT GGACATGTTC AGCAAGCGCG AGGGCGAGGT GGTGGCGGTG AACTGCGTGC TGCAGCTGAA CCGCTTCCTC GAGAAGGGCC CGGACTCGCT CAAGGCGTTC CTGGAGATGA TCCAGACGCT GCGGCCCAAG GTGGTGACGC TGGCCGAGCG CGAGGCCAAC CACAATCAGC CGCAGTTCCT CGACAGATTC GGCGAGGCCT ACCGCCACTA CGCCATCATT TTCGACTCGC TGGAGGCTAC TCTTCCCCCG AGAAGTCCCG ACCGCGTGAC AGTCGAGGAA GTGTGGTTCG GCCGGGAGAT CGCCAACATC GTCTCGTGCG ATGGCGCGGA CTGGGTCGAG CGGCACGAGA CGTTCGAGCA GTGGCGGGAG ATCATGGAAA GCGCAGGATT CCACTCGTTG CCCCCCAGCA CCTTCGCCCT CGCCCAGGCC AAACTCTTAC TTAGATATTA TCCCTCCGAG GGCTACCGGC TCTTTGAGAA CGACGACTGT CTTTTGCTTG GCTGGCAGGA CCACCCATTA TTTACAGTCT CTTCATGGCA CTGA |
Protein |
| >Mp2g03850.1 MHSLSLLQTT LNRHHNPFVC SPFLLHEMLS SVDAKLSAAL EPASASAARG RDSRALDGSP LRELIFECAQ AVARHDLDRS LGILRYLASK VPEAGDAGER VGAYFTRALA CRVAKRLEAA GGNGPEGDHS ELLASLRIPD APSQEEIHAA YLALNRVTPF LRFAHLTANQ AIVEEMEGED IVHLVDFEIM QGVQWPPLMQ ALAERPGGPP HLRLTGIGSS PDILRQTGNR LADFARTLNL PFEFLPLVAG GIEQVSVDMF SKREGEVVAV NCVLQLNRFL EKGPDSLKAF LEMIQTLRPK VVTLAEREAN HNQPQFLDRF GEAYRHYAII FDSLEATLPP RSPDRVTVEE VWFGREIANI VSCDGADWVE RHETFEQWRE IMESAGFHSL PPSTFALAQA KLLLRYYPSE GYRLFENDDC LLLGWQDHPL FTVSSWH |