Mp2g07200



Description

Annotation

Database ID Description
Pfam PF03936 Terpene synthase family, metal binding domain
SUPERFAMILY SSF48239 Terpenoid cyclases/Protein prenyltransferases
Gene3D G3DSA:1.10.600.10 Farnesyl Diphosphate Synthase
FunFam G3DSA:1.50.10.130:FF:000002 Ent-copalyl diphosphate synthase, chloroplastic
Gene3D G3DSA:1.50.10.130 -
Pfam PF01397 Terpene synthase, N-terminal domain
SFLD SFLDG01014 Terpene Cyclase Like 1 N-term
SFLD SFLDG01605 Terpene Cyclase Like 1 N-term - Enzymatic
PANTHER PTHR31739 ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC
CDD cd00684 Terpene_cyclase_plant_C1
Gene3D G3DSA:1.50.10.160 -
SUPERFAMILY SSF48576 Terpenoid synthases
MapolyID Mapoly0015s0008 -
GO GO:0000287 magnesium ion binding
GO GO:0016829 lyase activity
GO GO:0010333 terpene synthase activity
GO GO:0016102 diterpenoid biosynthetic process

Nomenclature

Gene symbol Product Transcript ID Status
MpTPS3 Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional

Associated Literature (AI-based literature mining, Beta-version)

CRISPR large-deletion mutants (Mp_cpsld) were generated; encodes the first enzyme of GA-related diterpenoid biosynthesis. Under cW+cFR, mutant thalli were significantly larger than wild-type, showing MpCPS is required for far-red-light developmental responses (hyponasty, slender thallus).

1 core 1 peripheral

Sun, R., et al. (2023) · Plant Cell  research experimental subject
CRISPR large-deletion mutants (Mp_cpsld) were generated; encodes the first enzyme of GA-related diterpenoid biosynthesis. Under cW+cFR, mutant thalli were significantly larger than wild-type, showing MpCPS is required for far-red-light developmental responses (hyponasty, slender thallus).
Kawamura, S., et al. (2022) · Plant & Cell Physiology  research citation background
Plant-type terpene synthase that co-expressed with oil body markers in the demonstration, suggesting possible involvement in oil-body compound biosynthesis.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g07200.1 chr2:8105918..8112152 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g07200 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g07200 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.