Mp2g09080



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF07993 Male sterility protein
Gene3D G3DSA:3.40.50.720 -
Pfam PF03015 Male sterility protein
CDD cd05236 FAR-N_SDR_e
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains
Coils Coil Coil
CDD cd09071 FAR_C
PANTHER PTHR11011 MALE STERILITY PROTEIN 2-RELATED
KEGG K13356 alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]
KOG KOG1221 Acyl-CoA reductase; [I]
MapolyID Mapoly0015s0192 -
GO GO:0080019 alcohol-forming very long-chain fatty acyl-CoA reductase activity
GO GO:0010345 suberin biosynthetic process
GO GO:0035336 long-chain fatty-acyl-CoA metabolic process
GO GO:0043231 intracellular membrane-bounded organelle

Nomenclature

Gene symbol Product Transcript ID Status
MpFAR2 Secondary metabolism enzyme Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Associated Literature (AI-based literature mining, Beta-version)

Fatty acyl-CoA reductase; alcohol-forming step of cuticular wax biosynthesis. Part of a study on divergent evolution of the wax alcohol-forming pathway among bryophytes.

1 core 0 peripheral

Keyl, A., et al. (2024) · New Phytologist: https://doi.org/10.1111/nph.19687  research experimental subject
Fatty acyl-CoA reductase; alcohol-forming step of cuticular wax biosynthesis. Part of a study on divergent evolution of the wax alcohol-forming pathway among bryophytes.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g09080.1 chr2:10012885..10019346 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g09080 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g09080 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.