Mp2g10160



Description

Annotation

Database ID Description
FunFam G3DSA:3.40.50.2000:FF:000062 sulfoquinovosyl transferase SQD2
FunFam G3DSA:3.40.50.2000:FF:000044 Sulfoquinovosyl transferase SQD2
SUPERFAMILY SSF53756 UDP-Glycosyltransferase/glycogen phosphorylase
CDD cd03814 GT4-like
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B;
Pfam PF00534 Glycosyl transferases group 1
PANTHER PTHR45947 SULFOQUINOVOSYL TRANSFERASE SQD2
Pfam PF13439 Glycosyltransferase Family 4
KEGG K06119 sulfoquinovosyltransferase [EC:2.4.1.-]
KEGG K12583 phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
KOG KOG1111 N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase; [MOI]
MapolyID Mapoly0129s0040 -
GO GO:0009247 glycolipid biosynthetic process
GO GO:0009941 chloroplast envelope
GO GO:0016757 glycosyltransferase activity
GO GO:0046506 sulfolipid biosynthetic process
GO GO:0046510 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

SQDG synthase; qPCR showed induced expression under Pi and N starvation, correlating with SQDG accumulation.

0 core 1 peripheral

Shimojo, M., et al. (2023) · Planta  research experimental background
SQDG synthase; qPCR showed induced expression under Pi and N starvation, correlating with SQDG accumulation.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g10160.1 chr2:11049073..11054268 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g10160 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g10160 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.