Mp2g11200



Description

Annotation

Database ID Description
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
CDD cd02440 AdoMet_MTases
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
PANTHER PTHR47473 BTA1P
Pfam PF13649 Methyltransferase domain
Pfam PF11899 Protein of unknown function (DUF3419)
MobiDBLite mobidb-lite consensus disorder prediction
KEGG K13621 betaine lipid synthase
MapolyID Mapoly0023s0088 -

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Betaine lipid (DGTS) transferase; qPCR showed expression induced by Pi starvation, consistent with increased DGTS.

0 core 1 peripheral

Shimojo, M., et al. (2023) · Planta  research experimental background
Betaine lipid (DGTS) transferase; qPCR showed expression induced by Pi starvation, consistent with increased DGTS.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g11200.1 chr2:12231278..12237183 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g11200 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g11200 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.