Mp2g12910
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor |
| SUPERFAMILY | SSF81383 | F-box domain |
| FunFam | G3DSA:3.80.10.10:FF:000449 | F-box protein SKIP2 |
| Pfam | PF13516 | Leucine Rich repeat |
| CDD | cd22159 | F-box_AtTIR1-like |
| PANTHER | PTHR13318 | UNCHARACTERIZED |
| SUPERFAMILY | SSF52047 | RNI-like |
| Pfam | PF18511 | F-box |
| SMART | SM00367 | LRR_CC_2 |
| KOG | KOG1947 | Leucine rich repeat proteins, some proteins contain F-box; [R] |
| MapolyID | Mapoly0026s0081 | - |
| GO | GO:0005515 | protein binding |
| GO | GO:0019005 | SCF ubiquitin ligase complex |
| GO | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpVBF1-4 | F-BOX | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g12910 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g12910.1 TTTGTTTGTT TGTTGTTCTG GTTGCGCAAG GCGCTCGCAC GAGCGAAGGG GTCGATGTCG TAGGCTTGGA GTTGCGCTTG GAGTGGAGGT GGGACGAAGG ATTCGGGGCA GAGGTGCAGA TGAGGTCATG CGCAAGGTAT GGAGGAGGAG GAGGAGCAGG AGCAGGACGT CGTCCGGCTT CAGTCGTCGC CAGGTGCGGG CATTGGCAGC AGGGTCAGCA GCAGCAGCAG CAGCGCCGGC CAGCAACCGG TTGGTTAGCG TAGCGTAGTG TAGTGTAGCG AAGCGAAGTT TAGCGCAGGC GAGGCGAGGC GAGGCGAGCA GTGCCCAGCT ACTCCTGTCT TGTCATCAAT CAATCGCATG CACTTTCTCG TACGAAACGA CAGGCGAGTG CGAAATAAGG CAGCGTCGAA ACTCAGTGGC AGCCCAAAAG GTTTCCACGC GGTCATGGAG CCGAGGTCGG GAGGGTGAGC CCACGCAGAG ATGGCGGGGA GAGAGTGTTA GCAAGGCAGG CAGGAAGGAA GGAAGGAAGG AAGGACGGAA GGAAGTGTTT CAGGCCTTTC GATCTCGTAC CGCCTCTCGT GTTTCAGCGC AAAGCTGTTG TTGCTCTTCT TGCTCCTGAC TCGCACGGCT GGCGCGCGTG CTTAGGTCTG TACACAAGCG TTTGGTTTCT TGGGTGGTGT AAGATGTTGT AGAGATCCGG CAATGTAAAA TATGGAACTG GTGCTTGAAG AGGTTTGCTT TAGCTGTTGA GTCGCGTGGG CCCTCTGGAT AGCGCGTTGT TTGTCTATCC AGGGTTGGAA GTATGGCTTC CTCGTGAGGC GTACAGCATG CTTGGGAAAA CCTGTTATGG ACTATGAAGT GGAGACCGCA TTCGTTTGTG GCGCATCGGC TTGACCTTGG AGGCAGTGAG TGTGAGCTAG GTGCCCTGAA GGCATGAGTG CCTTGCGGGC GGCTACTTTG GTGCGGTAAG TTAGGCGTGG TCACTTTTTT ATCTGCGGTG GAAATGGATG GTTCACTTCG CGCTCTCCGG ACAAACGGAA AAGAGAGGCA GGTCTGTACA GGATGATCTC TGTCTAGGGA TCTTGTAGAA ATTGCAGGTG TAAGGATATG TGGGATAGAG TGTGCTAGGT ATGAAATGAC TTCTTCCTCG CTGCGATGGG TGATTCGCTT GTCGAATGTG CGATCCAAAT CAGCGATGTG TGCACCTTTC AGTGATTATG GGAAAAATCT TAGACCTTGA TTGGCAATGC AGGGACGGTG TCACACTTTC GACTTTTGTA GAATAGCATT TGAGGAGATT TAAAGAGAAG AACCAGTTGG ATTGCAAGCC AAATCTCTTC GCCTCATTTA CTGAGTGGAT TCTGCGGCTG GTCCATTGTG ACCGCAGCCT GTCGTACGGT CTTCAGCTAG GTTAGTCTAT GGGTCAGGGA ACTTCATCCG TCGCGTGTGC GTCAGGGCAA GAGGAAGAAG GAGTGCTCCA GGAGTTGGAT CAGAACAAGA TGCAGGGAAA AGACTTTTCT CTCCAAGTGC CGGATGAGTG CCTGTCATGC ATTTTTCAGA AACTCAGCTC CGTTGATCGG AAGACATGCT CCCTTGTCTG CAAGCGTTGG CACTGGGTAG AGGGGCAGGG TCGACAGCGG CTATCCTTGT ATGCACAGGA AAAGCTTCTG GATGCCCTTC CAGAATTGCT ATCTCGTTTC GAGCATGTTA CTAAACTCGC CTTAAAGTGT GACAAGAAGA TGACGAGTAT CGACGACGAA GCACTTTTTA TCGTCGGCCG GGACTGCAGG CAGTTGAAGA AGTTAAAATT GAAAGGGTGC AAACAGCTGA CGGACGACGG AATGGAAATT TTCGCAAGGG TTTGTGGACC ACTGAAGAAA ATTTCCTGCG GCTCGTGTGG TTTTGGTGCT CGAGGGCTGA ATTCGATCTT ACAACATTGC GTGAACCTAG AGGATCTGAC TGTGAAAAGA TTAAAAGGTC TCTACGAGGG TCCTTCGGAG CTCATTGGCC CAGGCTGTGG AAAGATACGG CGATTATGTC TGAAAGAGCT TTTCAATGCC CAGCTCTTCG GGCCTCTTCT CGCCGGCTCG AGGCATCTAC ATACTCTTAT GCTTTCGAAG AACTCTGGCA ACTGGGACAA GCTCCTGGAC ATTATTACTG AACACCTACC TGAGTTGGTG GAACTTCACA TGGAGAAGCT GCAACTTAGC GACAAAGGGT TGCAGGCGGT GGCTCGATGT AAAAGTCTGG AAGTTCTGTA CGTTGTGAAG GCTCCAGAGT GTACGAACGT CGGGCTCTCG GCGGTGGCAA CTGGTTGCAG GCGCTTGAGG AAATTACATG TCGACGGCTG GAAGGCCAGT CGAGTCGGAG ACGAAGGGCT CCTTTCGGTC GCCAGAACAT GCAAGGAGTT GCAGGAGTTA GTGTTGATTG GACTTAACGC AACCATGGCC AGTCTTAGTC CACTGGCCAC AAACTGCCAC GGACTCGAGA GGCTAGCACT GTGTAACAGT GAGACATTCG GGGATCCAGA ACTTTTATGC ATCGCAACCA AGTGCCAGTC TTTAAAAAAA CTATGCATCA AAAGCTGCCC GATTTCGGAT CAAGGCATGG AAGTTCTTGC CAGTGGCTGC CCAAATCTAG TGAAGATCAA AATCAAGAAG TGCAGAGGCG TGACACCCGC AAGTGTAGAC TGGCTTCAGA ATAAGAGGGA GACGCTAATG GTAACGCTGG ACACCGGGCT TCCATCACCT ATTACAGATT TGGCTACAGG TAGGGCCCTG CAACCCGGAA CAAATAGGGT TACTCGAGGG GCTGTTCCGC AAAACAGATC CCCATTGGCC AAAGCAAGGC TCGCAATTGT GGCGGGCGGT TCCTTCGTCG CCTGCACATT CTTGAGATGG TCGTCACCAG GTGGTAGTGG GTCGTCTTCG CCTACTTGAA TTCCACAATC CTTTCCATGG TTATTGCAAG ACGGCATGGT TGGCTACTGC AGTCTGTCCA TCCTGGTTGC TTAAGCTGGC GGAACACTGC GAAGGGTGAT TGTGTCTGGG TATGGGTGAG CAGATTTGCC TGAAAGTGTG CGTGCTTGGT TGCTTCAGTC CCTGTGGCAC TTTCACGGTA CTGGGAGAAG ATGATGCGTT TGAACGCCAT TCTAGTAACC GTGTCATGCA TGATCAAAGA ATCTGATGAA TTCTGTTCAT TGCTCTAGAC TACTCTGTAA GATGAACTTA TTCCGGAACT GATGGTTGGC TCGAGAGAAG GAATCGGAGA TCAGGGGATT TTTGATCCTT TGATCCTGCA GATTTATTGC AGTCATATCT TGATTCTTAT TTGCTCCCAA AGTGGGCAAG TTAGCGACTA CTGTCTTTGG CCAAACCAAA GTGGTTTCCT AGTTTAGCCT CTTTCTTTCT CAAGCTTTGT TGTACAAATC TGGTCTGTCC TTTTTGACTG ATTTTTGCGG AAGGCTCGTG TTTGTACAAA CTTCTGAAGC AAGAGAAGAG GTTAGTCAAG GGATCAGGAG ACGAAGCTCA TTGTGAAATT TCTTTTATAC CCAAAAAAGT GCCCAGTTTT AAAGTTACTG ATTTCGCACA ATGTGCTATT ATCCACTGCC ATCCTCGGGA TATTTTGGAT GCAGGCCCGA TAGAGGTTTT AGTGAAAGAT GCTGGCAGTT AAGCAATTTT TCCTGCTAGC CTTGGGAGCT CTCAGTATCC CTTGTCTGTC AGGACAGCTC AGTGAAATCT GGAGTACAGA TTGGATGATT TTAAGGTCTT CGTATGTCAG GGGATTTCAG CAGATTATCC GCTCATTGTA GTGTGCGAAT GTGACTTGCT TCTCCAAGAA ATAAAGGCGC TCATGTGGAG ATGGCATCTA ATTCGGGATG TATCCTCTAC TTCAAAACTT GAATGCAAGA CCTCGTCCCT GTACTCGTGC ATGGTTCTTC AAGGTTGGAG TAAGAATCTG AGGAAAATAC ATCAAGTTTG GTCGTTTACC TCGGAGACAA CATGCTGGTG GCAGGGCCAC CTGGAACCTG TAGCTATATC TGAACATAAA TAGATTATAT TTAATTCAGA TTGAGTACAG TATTACGCTT |
mRNA UTR + CDS |
| >Mp2g12910.1 TTTGTTTGTT TGTTGTTCTG GTTGCGCAAG GCGCTCGCAC GAGCGAAGGG GTCGATGTCG TAGGCTTGGA GTTGCGCTTG GAGTGGAGGT GGGACGAAGG ATTCGGGGCA GAGGTGCAGA TGAGGTCATG CGCAAGGTAT GGAGGAGGAG GAGGAGCAGG AGCAGGACGT CGTCCGGCTT CAGTCGTCGC CAGGTGCGGG CATTGGCAGC AGGGTCAGCA GCAGCAGCAG CAGCGCCGGC CAGCAACCGG TTGGTTAGCG TAGCGTAGTG TAGTGTAGCG AAGCGAAGTT TAGCGCAGGC GAGGCGAGGC GAGGCGAGCA GTGCCCAGCT ACTCCTGTCT TGTCATCAAT CAATCGCATG CACTTTCTCG TACGAAACGA CAGGCGAGTG CGAAATAAGG CAGCGTCGAA ACTCAGTGGC AGCCCAAAAG GTTTCCACGC GGTCATGGAG CCGAGGTCGG GAGGGTGAGC CCACGCAGAG ATGGCGGGGA GAGAGTGTTA GCAAGGCAGG CAGGAAGGAA GGAAGGAAGG AAGGACGGAA GGAAGTGTTT CAGGCCTTTC GATCTCGTAC CGCCTCTCGT GTTTCAGCGC AAAGCTGTTG TTGCTCTTCT TGCTCCTGAC TCGCACGGCT GGCGCGCGTG CTTAGGTCTG TACACAAGCG TTTGGTTTCT TGGGTGGTGT AAGATGTTGT AGAGATCCGG CAATGTAAAA TATGGAACTG GTGCTTGAAG AGGTTTGCTT TAGCTGTTGA GTCGCGTGGG CCCTCTGGAT AGCGCGTTGT TTGTCTATCC AGGGTTGGAA GTATGGCTTC CTCGTGAGGC GTACAGCATG CTTGGGAAAA CCTGTTATGG ACTATGAAGT GGAGACCGCA TTCGTTTGTG GCGCATCGGC TTGACCTTGG AGGCAGTGAG TGTGAGCTAG GTGCCCTGAA GGCATGAGTG CCTTGCGGGC GGCTACTTTG GTGCGGTAAG TTAGGCGTGG TCACTTTTTT ATCTGCGGTG GAAATGGATG GTTCACTTCG CGCTCTCCGG ACAAACGGAA AAGAGAGGCA GGTCTGTACA GGATGATCTC TGTCTAGGGA TCTTGTAGAA ATTGCAGGTG TAAGGATATG TGGGATAGAG TGTGCTAGGT ATGAAATGAC TTCTTCCTCG CTGCGATGGG TGATTCGCTT GTCGAATGTG CGATCCAAAT CAGCGATGTG TGCACCTTTC AGTGATTATG GGAAAAATCT TAGACCTTGA TTGGCAATGC AGGGACGGTG TCACACTTTC GACTTTTGTA GAATAGCATT TGAGGAGATT TAAAGAGAAG AACCAGTTGG ATTGCAAGCC AAATCTCTTC GCCTCATTTA CTGAGTGGAT TCTGCGGCTG GTCCATTGTG ACCGCAGCCT GTCGTACGGT CTTCAGCTAG GTTAGTCTAT GGGTCAGGGA ACTTCATCCG TCGCGTGTGC GTCAGGGCAA GAGGAAGAAG GAGTGCTCCA GGAGTTGGAT CAGAACAAGA TGCAGGGAAA AGACTTTTCT CTCCAAGTGC CGGATGAGTG CCTGTCATGC ATTTTTCAGA AACTCAGCTC CGTTGATCGG AAGACATGCT CCCTTGTCTG CAAGCGTTGG CACTGGGTAG AGGGGCAGGG TCGACAGCGG CTATCCTTGT ATGCACAGGA AAAGCTTCTG GATGCCCTTC CAGAATTGCT ATCTCGTTTC GAGCATGTTA CTAAACTCGC CTTAAAGTGT GACAAGAAGA TGACGAGTAT CGACGACGAA GCACTTTTTA TCGTCGGCCG GGACTGCAGG CAGTTGAAGA AGTTAAAATT GAAAGGGTGC AAACAGCTGA CGGACGACGG AATGGAAATT TTCGCAAGGG TTTGTGGACC ACTGAAGAAA ATTTCCTGCG GCTCGTGTGG TTTTGGTGCT CGAGGGCTGA ATTCGATCTT ACAACATTGC GTGAACCTAG AGGATCTGAC TGTGAAAAGA TTAAAAGGTC TCTACGAGGG TCCTTCGGAG CTCATTGGCC CAGGCTGTGG AAAGATACGG CGATTATGTC TGAAAGAGCT TTTCAATGCC CAGCTCTTCG GGCCTCTTCT CGCCGGCTCG AGGCATCTAC ATACTCTTAT GCTTTCGAAG AACTCTGGCA ACTGGGACAA GCTCCTGGAC ATTATTACTG AACACCTACC TGAGTTGGTG GAACTTCACA TGGAGAAGCT GCAACTTAGC GACAAAGGGT TGCAGGCGGT GGCTCGATGT AAAAGTCTGG AAGTTCTGTA CGTTGTGAAG GCTCCAGAGT GTACGAACGT CGGGCTCTCG GCGGTGGCAA CTGGTTGCAG GCGCTTGAGG AAATTACATG TCGACGGCTG GAAGGCCAGT CGAGTCGGAG ACGAAGGGCT CCTTTCGGTC GCCAGAACAT GCAAGGAGTT GCAGGAGTTA GTGTTGATTG GACTTAACGC AACCATGGCC AGTCTTAGTC CACTGGCCAC AAACTGCCAC GGACTCGAGA GGCTAGCACT GTGTAACAGT GAGACATTCG GGGATCCAGA ACTTTTATGC ATCGCAACCA AGTGCCAGTC TTTAAAAAAA CTATGCATCA AAAGCTGCCC GATTTCGGAT CAAGGCATGG AAGTTCTTGC CAGTGGCTGC CCAAATCTAG TGAAGATCAA AATCAAGAAG TGCAGAGGCG TGACACCCGC AAGTGTAGAC TGGCTTCAGA ATAAGAGGGA GACGCTAATG GTAACGCTGG ACACCGGGCT TCCATCACCT ATTACAGATT TGGCTACAGG TAGGGCCCTG CAACCCGGAA CAAATAGGGT TACTCGAGGG GCTGTTCCGC AAAACAGATC CCCATTGGCC AAAGCAAGGC TCGCAATTGT GGCGGGCGGT TCCTTCGTCG CCTGCACATT CTTGAGATGG TCGTCACCAG GTGGTAGTGG GTCGTCTTCG CCTACTTGAA TTCCACAATC CTTTCCATGG TTATTGCAAG ACGGCATGGT TGGCTACTGC AGTCTGTCCA TCCTGGTTGC TTAAGCTGGC GGAACACTGC GAAGGGTGAT TGTGTCTGGG TATGGGTGAG CAGATTTGCC TGAAAGTGTG CGTGCTTGGT TGCTTCAGTC CCTGTGGCAC TTTCACGGTA CTGGGAGAAG ATGATGCGTT TGAACGCCAT TCTAGTAACC GTGTCATGCA TGATCAAAGA ATCTGATGAA TTCTGTTCAT TGCTCTAGAC TACTCTGTAA GATGAACTTA TTCCGGAACT GATGGTTGGC TCGAGAGAAG GAATCGGAGA TCAGGGGATT TTTGATCCTT TGATCCTGCA GATTTATTGC AGTCATATCT TGATTCTTAT TTGCTCCCAA AGTGGGCAAG TTAGCGACTA CTGTCTTTGG CCAAACCAAA GTGGTTTCCT AGTTTAGCCT CTTTCTTTCT CAAGCTTTGT TGTACAAATC TGGTCTGTCC TTTTTGACTG ATTTTTGCGG AAGGCTCGTG TTTGTACAAA CTTCTGAAGC AAGAGAAGAG GTTAGTCAAG GGATCAGGAG ACGAAGCTCA TTGTGAAATT TCTTTTATAC CCAAAAAAGT GCCCAGTTTT AAAGTTACTG ATTTCGCACA ATGTGCTATT ATCCACTGCC ATCCTCGGGA TATTTTGGAT GCAGGCCCGA TAGAGGTTTT AGTGAAAGAT GCTGGCAGTT AAGCAATTTT TCCTGCTAGC CTTGGGAGCT CTCAGTATCC CTTGTCTGTC AGGACAGCTC AGTGAAATCT GGAGTACAGA TTGGATGATT TTAAGGTCTT CGTATGTCAG GGGATTTCAG CAGATTATCC GCTCATTGTA GTGTGCGAAT GTGACTTGCT TCTCCAAGAA ATAAAGGCGC TCATGTGGAG ATGGCATCTA ATTCGGGATG TATCCTCTAC TTCAAAACTT GAATGCAAGA CCTCGTCCCT GTACTCGTGC ATGGTTCTTC AAGGTTGGAG TAAGAATCTG AGGAAAATAC ATCAAGTTTG GTCGTTTACC TCGGAGACAA CATGCTGGTG GCAGGGCCAC CTGGAACCTG TAGCTATATC TGAACATAAA TAGATTATAT TTAATTCAGA TTGAGTACAG TATTACGCTT |
CDS |
| >Mp2g12910.1 ATGGGTCAGG GAACTTCATC CGTCGCGTGT GCGTCAGGGC AAGAGGAAGA AGGAGTGCTC CAGGAGTTGG ATCAGAACAA GATGCAGGGA AAAGACTTTT CTCTCCAAGT GCCGGATGAG TGCCTGTCAT GCATTTTTCA GAAACTCAGC TCCGTTGATC GGAAGACATG CTCCCTTGTC TGCAAGCGTT GGCACTGGGT AGAGGGGCAG GGTCGACAGC GGCTATCCTT GTATGCACAG GAAAAGCTTC TGGATGCCCT TCCAGAATTG CTATCTCGTT TCGAGCATGT TACTAAACTC GCCTTAAAGT GTGACAAGAA GATGACGAGT ATCGACGACG AAGCACTTTT TATCGTCGGC CGGGACTGCA GGCAGTTGAA GAAGTTAAAA TTGAAAGGGT GCAAACAGCT GACGGACGAC GGAATGGAAA TTTTCGCAAG GGTTTGTGGA CCACTGAAGA AAATTTCCTG CGGCTCGTGT GGTTTTGGTG CTCGAGGGCT GAATTCGATC TTACAACATT GCGTGAACCT AGAGGATCTG ACTGTGAAAA GATTAAAAGG TCTCTACGAG GGTCCTTCGG AGCTCATTGG CCCAGGCTGT GGAAAGATAC GGCGATTATG TCTGAAAGAG CTTTTCAATG CCCAGCTCTT CGGGCCTCTT CTCGCCGGCT CGAGGCATCT ACATACTCTT ATGCTTTCGA AGAACTCTGG CAACTGGGAC AAGCTCCTGG ACATTATTAC TGAACACCTA CCTGAGTTGG TGGAACTTCA CATGGAGAAG CTGCAACTTA GCGACAAAGG GTTGCAGGCG GTGGCTCGAT GTAAAAGTCT GGAAGTTCTG TACGTTGTGA AGGCTCCAGA GTGTACGAAC GTCGGGCTCT CGGCGGTGGC AACTGGTTGC AGGCGCTTGA GGAAATTACA TGTCGACGGC TGGAAGGCCA GTCGAGTCGG AGACGAAGGG CTCCTTTCGG TCGCCAGAAC ATGCAAGGAG TTGCAGGAGT TAGTGTTGAT TGGACTTAAC GCAACCATGG CCAGTCTTAG TCCACTGGCC ACAAACTGCC ACGGACTCGA GAGGCTAGCA CTGTGTAACA GTGAGACATT CGGGGATCCA GAACTTTTAT GCATCGCAAC CAAGTGCCAG TCTTTAAAAA AACTATGCAT CAAAAGCTGC CCGATTTCGG ATCAAGGCAT GGAAGTTCTT GCCAGTGGCT GCCCAAATCT AGTGAAGATC AAAATCAAGA AGTGCAGAGG CGTGACACCC GCAAGTGTAG ACTGGCTTCA GAATAAGAGG GAGACGCTAA TGGTAACGCT GGACACCGGG CTTCCATCAC CTATTACAGA TTTGGCTACA GGTAGGGCCC TGCAACCCGG AACAAATAGG GTTACTCGAG GGGCTGTTCC GCAAAACAGA TCCCCATTGG CCAAAGCAAG GCTCGCAATT GTGGCGGGCG GTTCCTTCGT CGCCTGCACA TTCTTGAGAT GGTCGTCACC AGGTGGTAGT GGGTCGTCTT CGCCTACTTG A |
Protein |
| >Mp2g12910.1 MGQGTSSVAC ASGQEEEGVL QELDQNKMQG KDFSLQVPDE CLSCIFQKLS SVDRKTCSLV CKRWHWVEGQ GRQRLSLYAQ EKLLDALPEL LSRFEHVTKL ALKCDKKMTS IDDEALFIVG RDCRQLKKLK LKGCKQLTDD GMEIFARVCG PLKKISCGSC GFGARGLNSI LQHCVNLEDL TVKRLKGLYE GPSELIGPGC GKIRRLCLKE LFNAQLFGPL LAGSRHLHTL MLSKNSGNWD KLLDIITEHL PELVELHMEK LQLSDKGLQA VARCKSLEVL YVVKAPECTN VGLSAVATGC RRLRKLHVDG WKASRVGDEG LLSVARTCKE LQELVLIGLN ATMASLSPLA TNCHGLERLA LCNSETFGDP ELLCIATKCQ SLKKLCIKSC PISDQGMEVL ASGCPNLVKI KIKKCRGVTP ASVDWLQNKR ETLMVTLDTG LPSPITDLAT GRALQPGTNR VTRGAVPQNR SPLAKARLAI VAGGSFVACT FLRWSSPGGS GSSSPT |