Mp2g16340
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF13837 | Myb/SANT-like DNA-binding domain |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| PANTHER | PTHR33492 | OSJNBA0043A12.37 PROTEIN-RELATED |
| MapolyID | Mapoly0122s0030 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpTRIHELIX28 | transcription factor, Trihelix | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g16340 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g16340.1 CTCACCCAGA GGCTTGCCAA TATCTGTGGA TTGAAGTAAC TTCTGAGCGA CATAATTATG GACATGAAGT AAGATGAAGA CTTCTGATCA AGGGCTGCTG CTGGAGATAC TGAGAGGATA GTGTGAGTGT GAAGGGTGGC GTCGAGATGG AGGAGGACAC GGTGGGCCCG ACGTACAGCG GTGGAAGGTG GACACTGGAC GAAACGCTGA CGCTCGTGCA TGCTCTGGAG CATGAGTTCG GCCCAAGCCT CGCCTGGGAA GCTCGAGCCG CCAACGAGGT TGAACTGAAG GTCTCGTTTC AGAATATCGA AAAGTACATG CGCCATCGCG GGTTTTCGAA CAGGAGCGCC AACATCTGCA GACTGAAATA CTCGAAAATG CGGAACCAGT TCAACAAAAT CCAGGAATGG TCGCAAGTGA ACAATATGGA CTTTTGCTGT CTCAGTGATT CGGCAAAACG CGCCGAACCC GGCCTTTATT CCATGAACCT TCAGGTCCTG GAGCTGATGA GATCCATACT TGATAAATGT GGCGAGGCCC ATGGCACTGA ATCTGGACAA GAGATGGACT CGGTACTGGT ACCAACTGGA GAGGGCATTG AACAGATGGA TGCGAAACGA AGACGAGAAA GAACTGCAGT GCCAGATTTT ACACCTTTCG AAACAGAATT TGCGGAATTT GAGGATTCAG TGCTGAAAAC AGTAACGGAA AATAGAAACT TGGCCGGAAT CGCTCATGCT GATGCTGGGA TCTCGCCTTC TCTCATGGCG GATACTTCGA AACTACCTCC AGTACGAAAT GAGAAAACAG ATCTCCAAAC AGAATCTGAG AGAAGAATGG ACTCAGCATC CGAAGCGTCA GGACAAAGAT TTCAAGAGCT CGAATTCAGC AACACCGATG CTGAAAACTG GATTACTTCG GTGGGGGAGA TGTCGGAGCT TCCTCGTGCT GAAGCACAGA CGGCCATTCT CCACACTGAT CAACAATCTG GGAAAGAAAT ATACACAATT CTCGAGTCAA CACATGAAGA AATAAAGGTG GCAGATTATG ATAATGCTGG ACAGATGCCT TTCTCTGAGA AGGTGAACCA GGATGAGCCT CTTGGACCAG TACAGGAGGC AGTAACTTCC TCTTGTGACG ATGGATCTCT GAGATTCTCG ATGGCAGCTG CCGAAGGTAA ACATAATCTC ACCATTGGTC TGTGCCATGT TCTTGGGCTA CAATTAGGCA GTGATCAATG CATCGTCCAC TTCTGCTCAC TTATTGATAT ATACTCTACC TTTTGTCCAT TAAACGGTCA CAATGTAGGA GGCGGAAGAC AGTCTGAAAG GAGAGAGATC CTCGGTGGCG GATTTGAACA TCTAATCGAC TCGGACCTAG CTGCCGGACC AAAGAGACTG ACTGTCAAAA GACAGCGCCC CGACATGAAT GCTGAACAGT CCAAGTTGAG CCAGGAAGCC AAGAGCAAGA AACAGCTGAA GACAGCTGAA GGCGAATCAG GACATTACTT TGAGAAGAAA GGAACAGAAG TTCCTGCCAA CAAAAGTGAA ATGCTTACCG CAATCAAAGA CACTGCTGGA ACTGGATTCA TTGCAAAATC AAGAAACCTC ACGCACGAGC TGAGAGAAAT TAGATCAAAA CAGCTCGAAA TCACAAAGCG GAATCTCATG CAACAAAAAA AAAGGCTAGG AGCTCTCGCA TCTGTTGTTC ACAACGCTTG TGCTGTACTT GAAGGAAGTG GAAAGAGCTC AAACGCTTTC TCCACTTCAC CGACTCTTTA TAGAACAAAA GCTATGGACT AAAATCTGGT TACTATGAAT TCTGGCGTAG ATGAGGACAA ACCTCATATC AGATAATGAT GTAAGTGTTA TATAGTCAGG AGGTACATAC GAG |
mRNA UTR + CDS |
| >Mp2g16340.1 CTCACCCAGA GGCTTGCCAA TATCTGTGGA TTGAAGTAAC TTCTGAGCGA CATAATTATG GACATGAAGT AAGATGAAGA CTTCTGATCA AGGGCTGCTG CTGGAGATAC TGAGAGGATA GTGTGAGTGT GAAGGGTGGC GTCGAGATGG AGGAGGACAC GGTGGGCCCG ACGTACAGCG GTGGAAGGTG GACACTGGAC GAAACGCTGA CGCTCGTGCA TGCTCTGGAG CATGAGTTCG GCCCAAGCCT CGCCTGGGAA GCTCGAGCCG CCAACGAGGT TGAACTGAAG GTCTCGTTTC AGAATATCGA AAAGTACATG CGCCATCGCG GGTTTTCGAA CAGGAGCGCC AACATCTGCA GACTGAAATA CTCGAAAATG CGGAACCAGT TCAACAAAAT CCAGGAATGG TCGCAAGTGA ACAATATGGA CTTTTGCTGT CTCAGTGATT CGGCAAAACG CGCCGAACCC GGCCTTTATT CCATGAACCT TCAGGTCCTG GAGCTGATGA GATCCATACT TGATAAATGT GGCGAGGCCC ATGGCACTGA ATCTGGACAA GAGATGGACT CGGTACTGGT ACCAACTGGA GAGGGCATTG AACAGATGGA TGCGAAACGA AGACGAGAAA GAACTGCAGT GCCAGATTTT ACACCTTTCG AAACAGAATT TGCGGAATTT GAGGATTCAG TGCTGAAAAC AGTAACGGAA AATAGAAACT TGGCCGGAAT CGCTCATGCT GATGCTGGGA TCTCGCCTTC TCTCATGGCG GATACTTCGA AACTACCTCC AGTACGAAAT GAGAAAACAG ATCTCCAAAC AGAATCTGAG AGAAGAATGG ACTCAGCATC CGAAGCGTCA GGACAAAGAT TTCAAGAGCT CGAATTCAGC AACACCGATG CTGAAAACTG GATTACTTCG GTGGGGGAGA TGTCGGAGCT TCCTCGTGCT GAAGCACAGA CGGCCATTCT CCACACTGAT CAACAATCTG GGAAAGAAAT ATACACAATT CTCGAGTCAA CACATGAAGA AATAAAGGTG GCAGATTATG ATAATGCTGG ACAGATGCCT TTCTCTGAGA AGGTGAACCA GGATGAGCCT CTTGGACCAG TACAGGAGGC AGTAACTTCC TCTTGTGACG ATGGATCTCT GAGATTCTCG ATGGCAGCTG CCGAAGGAGG CGGAAGACAG TCTGAAAGGA GAGAGATCCT CGGTGGCGGA TTTGAACATC TAATCGACTC GGACCTAGCT GCCGGACCAA AGAGACTGAC TGTCAAAAGA CAGCGCCCCG ACATGAATGC TGAACAGTCC AAGTTGAGCC AGGAAGCCAA GAGCAAGAAA CAGCTGAAGA CAGCTGAAGG CGAATCAGGA CATTACTTTG AGAAGAAAGG AACAGAAGTT CCTGCCAACA AAAGTGAAAT GCTTACCGCA ATCAAAGACA CTGCTGGAAC TGGATTCATT GCAAAATCAA GAAACCTCAC GCACGAGCTG AGAGAAATTA GATCAAAACA GCTCGAAATC ACAAAGCGGA ATCTCATGCA ACAAAAAAAA AGGCTAGGAG CTCTCGCATC TGTTGTTCAC AACGCTTGTG CTGTACTTGA AGGAAGTGGA AAGAGCTCAA ACGCTTTCTC CACTTCACCG ACTCTTTATA GAACAAAAGC TATGGACTAA AATCTGGTTA CTATGAATTC TGGCGTAGAT GAGGACAAAC CTCATATCAG ATAATGATGT AAGTGTTATA TAGTCAGGAG GTACATACGA G |
CDS |
| >Mp2g16340.1 ATGGAGGAGG ACACGGTGGG CCCGACGTAC AGCGGTGGAA GGTGGACACT GGACGAAACG CTGACGCTCG TGCATGCTCT GGAGCATGAG TTCGGCCCAA GCCTCGCCTG GGAAGCTCGA GCCGCCAACG AGGTTGAACT GAAGGTCTCG TTTCAGAATA TCGAAAAGTA CATGCGCCAT CGCGGGTTTT CGAACAGGAG CGCCAACATC TGCAGACTGA AATACTCGAA AATGCGGAAC CAGTTCAACA AAATCCAGGA ATGGTCGCAA GTGAACAATA TGGACTTTTG CTGTCTCAGT GATTCGGCAA AACGCGCCGA ACCCGGCCTT TATTCCATGA ACCTTCAGGT CCTGGAGCTG ATGAGATCCA TACTTGATAA ATGTGGCGAG GCCCATGGCA CTGAATCTGG ACAAGAGATG GACTCGGTAC TGGTACCAAC TGGAGAGGGC ATTGAACAGA TGGATGCGAA ACGAAGACGA GAAAGAACTG CAGTGCCAGA TTTTACACCT TTCGAAACAG AATTTGCGGA ATTTGAGGAT TCAGTGCTGA AAACAGTAAC GGAAAATAGA AACTTGGCCG GAATCGCTCA TGCTGATGCT GGGATCTCGC CTTCTCTCAT GGCGGATACT TCGAAACTAC CTCCAGTACG AAATGAGAAA ACAGATCTCC AAACAGAATC TGAGAGAAGA ATGGACTCAG CATCCGAAGC GTCAGGACAA AGATTTCAAG AGCTCGAATT CAGCAACACC GATGCTGAAA ACTGGATTAC TTCGGTGGGG GAGATGTCGG AGCTTCCTCG TGCTGAAGCA CAGACGGCCA TTCTCCACAC TGATCAACAA TCTGGGAAAG AAATATACAC AATTCTCGAG TCAACACATG AAGAAATAAA GGTGGCAGAT TATGATAATG CTGGACAGAT GCCTTTCTCT GAGAAGGTGA ACCAGGATGA GCCTCTTGGA CCAGTACAGG AGGCAGTAAC TTCCTCTTGT GACGATGGAT CTCTGAGATT CTCGATGGCA GCTGCCGAAG GAGGCGGAAG ACAGTCTGAA AGGAGAGAGA TCCTCGGTGG CGGATTTGAA CATCTAATCG ACTCGGACCT AGCTGCCGGA CCAAAGAGAC TGACTGTCAA AAGACAGCGC CCCGACATGA ATGCTGAACA GTCCAAGTTG AGCCAGGAAG CCAAGAGCAA GAAACAGCTG AAGACAGCTG AAGGCGAATC AGGACATTAC TTTGAGAAGA AAGGAACAGA AGTTCCTGCC AACAAAAGTG AAATGCTTAC CGCAATCAAA GACACTGCTG GAACTGGATT CATTGCAAAA TCAAGAAACC TCACGCACGA GCTGAGAGAA ATTAGATCAA AACAGCTCGA AATCACAAAG CGGAATCTCA TGCAACAAAA AAAAAGGCTA GGAGCTCTCG CATCTGTTGT TCACAACGCT TGTGCTGTAC TTGAAGGAAG TGGAAAGAGC TCAAACGCTT TCTCCACTTC ACCGACTCTT TATAGAACAA AAGCTATGGA CTAA |
Protein |
| >Mp2g16340.1 MEEDTVGPTY SGGRWTLDET LTLVHALEHE FGPSLAWEAR AANEVELKVS FQNIEKYMRH RGFSNRSANI CRLKYSKMRN QFNKIQEWSQ VNNMDFCCLS DSAKRAEPGL YSMNLQVLEL MRSILDKCGE AHGTESGQEM DSVLVPTGEG IEQMDAKRRR ERTAVPDFTP FETEFAEFED SVLKTVTENR NLAGIAHADA GISPSLMADT SKLPPVRNEK TDLQTESERR MDSASEASGQ RFQELEFSNT DAENWITSVG EMSELPRAEA QTAILHTDQQ SGKEIYTILE STHEEIKVAD YDNAGQMPFS EKVNQDEPLG PVQEAVTSSC DDGSLRFSMA AAEGGGRQSE RREILGGGFE HLIDSDLAAG PKRLTVKRQR PDMNAEQSKL SQEAKSKKQL KTAEGESGHY FEKKGTEVPA NKSEMLTAIK DTAGTGFIAK SRNLTHELRE IRSKQLEITK RNLMQQKKRL GALASVVHNA CAVLEGSGKS SNAFSTSPTL YRTKAMD |