Mp2g20110



Description

Annotation

Database ID Description
SUPERFAMILY SSF48239 Terpenoid cyclases/Protein prenyltransferases
Gene3D G3DSA:1.50.10.20 -
Pfam PF13243 Squalene-hopene cyclase C-terminal domain
PANTHER PTHR11764 TERPENE CYCLASE/MUTASE FAMILY MEMBER
Pfam PF13249 Squalene-hopene cyclase N-terminal domain
KOG KOG0497 Oxidosqualene-lanosterol cyclase and related proteins; [I]
MapolyID Mapoly0055s0038 -
GO GO:0005811 lipid droplet
GO GO:0016104 triterpenoid biosynthetic process
GO GO:0016866 intramolecular transferase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpCQC Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g20110.1 chr2:24176834..24180426 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g20110 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g20110 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.