Mp2g21620



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.50.1820 alpha/beta hydrolase
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF53474 alpha/beta-Hydrolases
SMART SM00563 plsc_2
Pfam PF12697 Alpha/beta hydrolase family
CDD cd07987 LPLAT_MGAT-like
Pfam PF03982 Diacylglycerol acyltransferase
PANTHER PTHR22753 TRANSMEMBRANE PROTEIN 68
KOG KOG0831 Acyl-CoA:diacylglycerol acyltransferase (DGAT); N-term missing; C-term missing; [I]
KOG KOG1454 Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); N-term missing; [R]
MapolyID Mapoly0040s0052 -
GO GO:0016746 acyltransferase activity
GO GO:0008374 O-acyltransferase activity

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

UVB-induced DEG, chloroplastic acyltransferase-like protein (annotation).

0 core 1 peripheral

Clayton, W. A., et al. (2018) · Plant Journal  research experimental background
UVB-induced DEG, chloroplastic acyltransferase-like protein (annotation).

Transcript models

Transcript ID Location Sequences Extract region
Mp2g21620.1 chr2:26409248..26416334 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g21620 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g21620 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.