Mp2g22330



Description

Annotation

Database ID Description
SMART SM00273 enth_2
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:1.25.40.90:FF:000005 Clathrin assembly protein AP180
CDD cd03564 ANTH_N
Gene3D G3DSA:1.25.40.90 -
Pfam PF07651 ANTH domain
PANTHER PTHR22951 CLATHRIN ASSEMBLY PROTEIN
SUPERFAMILY SSF48464 ENTH/VHS domain
SUPERFAMILY SSF89009 GAT-like domain
ProSiteProfiles PS50942 ENTH domain profile.
Gene3D G3DSA:1.20.58.150 ANTH domain
FunFam G3DSA:1.20.58.150:FF:000003 Putative clathrin assembly protein
KOG KOG0251 Clathrin assembly protein AP180 and related proteins, contain ENTH domain; [TU]
KOG KOG0119 Splicing factor 1/branch point binding protein (RRM superfamily); N-term missing; [A]
MapolyID Mapoly0072s0094 -
GO GO:0000149 SNARE binding
GO GO:0005543 phospholipid binding
GO GO:0072583 clathrin-dependent endocytosis
GO GO:0030276 clathrin binding
GO GO:0006900 vesicle budding from membrane
GO GO:0048268 clathrin coat assembly
GO GO:0005905 clathrin-coated pit
GO GO:0005546 phosphatidylinositol-4,5-bisphosphate binding
GO GO:0030136 clathrin-coated vesicle
GO GO:0005545 1-phosphatidylinositol binding
GO GO:0032050 clathrin heavy chain binding

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

ANTH-domain (PICALM) protein (Mp2g22330); endocytic adaptor, localization analyzed.

1 core 0 peripheral

Minamino, N., et al. (2024) · Plant & Cell Physiology  research experimental subject
ANTH-domain (PICALM) protein (Mp2g22330); endocytic adaptor, localization analyzed.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g22330.1 chr2:27110434..27117132 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g22330 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g22330 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.