Mp2g22560



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
PANTHER PTHR47997 MYB DOMAIN PROTEIN 55
FunFam G3DSA:1.10.10.60:FF:000185 MYB transcription factor
CDD cd00167 SANT
ProSiteProfiles PS50090 Myb-like domain profile.
FunFam G3DSA:1.10.10.60:FF:000394 MYB transcription factor
SUPERFAMILY SSF46689 Homeodomain-like
Gene3D G3DSA:1.10.10.60 -
SMART SM00717 sant
Pfam PF00249 Myb-like DNA-binding domain
KEGG K09422 transcription factor MYB, plant
KOG KOG0048 Transcription factor, Myb superfamily; [K]
MapolyID Mapoly0072s0075 -

Nomenclature

Gene symbol Product Transcript ID Status
MpR2R3-MYB13 transcription factor, MYB Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, MYB (from nomenclature)

0 core 1 peripheral

Clayton, W. A., et al. (2018) · Plant Journal  research experimental background
MYB13 transcript in NanoString panel, altered in rup1 (annotation).

Transcript models

Transcript ID Location Sequences Extract region
Mp2g22560.1 chr2:27367274..27370572 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g22560.2 chr2:27367274..27370572 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.