Mp2g23220
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain |
| PANTHER | PTHR47874 | EXPRESSED PROTEIN |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. |
| NCBIfam | TIGR00756 | pentatricopeptide repeat |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF01535 | PPR repeat |
| Pfam | PF13041 | PPR repeat family |
| MapolyID | Mapoly0072s0009 | - |
| GO | GO:0003729 | mRNA binding |
| GO | GO:0005515 | protein binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPPR_47 | Pentatricopeptide repeat proteins | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g23220 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g23220.1 TGGCACTCGT TCGAGGGGGG CTCTGCGAGC GATTGTGAAT TGGTTCGTGC GTCATCGACC GATCGATCCG CTGGGAAATC GTCCTTCGTC GTGAGAGTCG AACACGGAGC AAGTGCGCCG TGGCTGTGCG AAATTGAGGC GAGGAGGCGC CATCGAGCGA GTGATGGTGA GGGGAGGCGG TCAGCTGCTG TCTTTGCTCA GGGCCGTGGG CGGCCAATGT GACAAGCTGC GAAGCAGTAG CAGTTCGGGC CGCGGTCTCA CATCCGATCT TCAGTCTCGG ACGAGGGCCT GGGGCGCGCC CGTCGTCGAA GGGGTTGCTG GAAGCAGAGG CATTTGCCAG GAGCCGCAGA TCGCCGCGCT GAGAGGGTCG GGGCTGAATT CTGCCCGTTT CTGCACGGTT GCCGAGTCCG GCGATGTTGC GACTCCTCCG GTGCCTGTTG TTGTCAAGGA GAAGTCGTAT TATGTTCCTG CACGACACCC CGGAGCGCCA GATCCCAAGC CCAGGAATGA CAGGTTCTTT CGGGCGGGCA ATAATTCGAC CGTGGCTCAC ATGGTCAGGT TGTTGGAAGC CGCTCCCAGC AACGCCGATG TGGAGAAAAT CCTGGATGAC CGAATTGCTG AGCTTACAGA GACCAAGCGC TGGCCCTGGA TGCCTCTTCT GGATGCATTG CAACGAGGAC CCAAGCCGTA TCTGGCCCTA GAGGTGGGTA GAATGTAGAG CATCCCTCCT CTTGCCTCTG AATTTCTCAA AGCTTGATGT GTATGTTTTA TCTTCTTTCC GTATTTTCAC CACTTGATGA GCTCACTTTC AGTCGGACAT TTGATGATTA TGATGGAATA CCTGATTTGG GGAAAACCTG TAATTGTTCC GATATTCTTC CAGTGCGTTT AACTTTTCTC ATCTGAACAT ATGCTCTCTA GGTCTTCAAC TGGAAGAAAG ACAAGTTTGA TGGAGGAGAT CCAAAAGAGT ACGCGAAGAT GATTTCGACT GCGGGGAAGC TCAATCAACT CGACTTGGCT ACGACTCTGT TCAAGCAAAT GGAGTTGAAA GGCGTGAAAC GCATTCCTAT CACTTGTAAT GCACTCATAA GCGCATATTC GAAGAACAAC CAGGCCGACC AAGCCATTGC CCTGTTCAAA GAAATGCAAG AGACCGATGA CTGCAAACCT ACGCTTGTAA CTTACAATAC CCTGATTGCG ATGTACAGCA AATTGAGTGT ACAGGACATG GAACTTTACT TCGAGGCCTG TAAGGAAGCC GGTTTTTTCC CTGACAGACT TACCTACAAC TCGCTCATCT GGGGTTACAT GAGGGCTGGT ATGTTCGACA AGATGGAGGA GATTTACGAG CAGCTCATGA AGGCAGGTTG TAAACCTGAC CCGATCACTT TCAGCGCCCT CATCATCGGG TTTTCAAAGG CCTCTGCACT GGACAAGATG GAAGCGGCCT TCAGTCATAT GCAGGAGGAA GGATTCGCGA TCAACGCCAT GATTGCTGAA ATCATGGTGG AGTTTTATGC TGCAGAGAGA CACTTCGAGA AGATGGAAAG AATCATGAAG ATTGTTGCCA ATACTCCAGG CACGTCGTGC ACCTCACGAA TTTATGGCTT GGCCATCGAA GCCTATGCTC AGACACGTCG TATCGAAGAA ATGGAACGAA CTATTGACGT TATGTTGGCC AGCAGGAGGC TCTTCACCAC TCCCAAGACA TTAGAGTCGG TGATCGAAGC CTATGGTGAG AAGTCCGACT TTGAAGGGCT CGAGAAGACC TTGACCCGGG TGAAGGGCTT GGGATGGACC TATCAGCTGA CCACTTTCCA CACCTTACTG CACGAGTATG GGAAGGGCAG AATGTTTGAC AAGATGGAAG ACGTCTTTGA TGAGATGAAG AGAGCTGAAG ACGCCCAACC GACAGCGGAG ACCTACCAAA TTCTAGCAGA CTCATATGAC AGCGCTGGTG AAGGAGATAT GTTGATGAGG ACGGTTGAGA GAATGCGTGA AGCTGGATTC AACACTCAAC CAGTCACTGA TAAAGAGGTC GACCGTGCAT GGACCGACGA CGAAATTTTC GGTGGAAAGA GACGGTGACC AACAAGAGTT TTGATTCCTT TCTTGCTACT CATCATCTTA GGCTGTTTAA GTCTTAGGCT CTCCCTATAT TCCACTGGAA TCACTTCAGG ACAGCCACTT TCTGACTTTT TTCTGCCCTC CACACGAGGC TTATTTCAAA AGCCTTTGCA GTGAAGGAGA GGCCGGCACG TAGCACTTGC TGTTATCTGC ATATTGTAGA GGGAAGACGT AGGAATTCAA ATTTTTAGCT TCATACGATC AGAAATATGA TGATGTAGAA ACTGTTTCTC GTCACATTCA CTTTAATCTT GGTTGTGCGA TCTATGTAAG AGTTTTTGGG CTTGTGGACT GTAAGATGCG TTAGCCTCAT ACTGAATGAC GAGTATGTGG TGTGTTTCTG TTTTATCATT ACTCGTATTA GTTCATGGCC TAATTCTTGC TTGTAGTCAT GTACCGAGAA GTTGTAATGC TGTGACC |
mRNA UTR + CDS |
| >Mp2g23220.1 TGGCACTCGT TCGAGGGGGG CTCTGCGAGC GATTGTGAAT TGGTTCGTGC GTCATCGACC GATCGATCCG CTGGGAAATC GTCCTTCGTC GTGAGAGTCG AACACGGAGC AAGTGCGCCG TGGCTGTGCG AAATTGAGGC GAGGAGGCGC CATCGAGCGA GTGATGGTGA GGGGAGGCGG TCAGCTGCTG TCTTTGCTCA GGGCCGTGGG CGGCCAATGT GACAAGCTGC GAAGCAGTAG CAGTTCGGGC CGCGGTCTCA CATCCGATCT TCAGTCTCGG ACGAGGGCCT GGGGCGCGCC CGTCGTCGAA GGGGTTGCTG GAAGCAGAGG CATTTGCCAG GAGCCGCAGA TCGCCGCGCT GAGAGGGTCG GGGCTGAATT CTGCCCGTTT CTGCACGGTT GCCGAGTCCG GCGATGTTGC GACTCCTCCG GTGCCTGTTG TTGTCAAGGA GAAGTCGTAT TATGTTCCTG CACGACACCC CGGAGCGCCA GATCCCAAGC CCAGGAATGA CAGGTTCTTT CGGGCGGGCA ATAATTCGAC CGTGGCTCAC ATGGTCAGGT TGTTGGAAGC CGCTCCCAGC AACGCCGATG TGGAGAAAAT CCTGGATGAC CGAATTGCTG AGCTTACAGA GACCAAGCGC TGGCCCTGGA TGCCTCTTCT GGATGCATTG CAACGAGGAC CCAAGCCGTA TCTGGCCCTA GAGGTCTTCA ACTGGAAGAA AGACAAGTTT GATGGAGGAG ATCCAAAAGA GTACGCGAAG ATGATTTCGA CTGCGGGGAA GCTCAATCAA CTCGACTTGG CTACGACTCT GTTCAAGCAA ATGGAGTTGA AAGGCGTGAA ACGCATTCCT ATCACTTGTA ATGCACTCAT AAGCGCATAT TCGAAGAACA ACCAGGCCGA CCAAGCCATT GCCCTGTTCA AAGAAATGCA AGAGACCGAT GACTGCAAAC CTACGCTTGT AACTTACAAT ACCCTGATTG CGATGTACAG CAAATTGAGT GTACAGGACA TGGAACTTTA CTTCGAGGCC TGTAAGGAAG CCGGTTTTTT CCCTGACAGA CTTACCTACA ACTCGCTCAT CTGGGGTTAC ATGAGGGCTG GTATGTTCGA CAAGATGGAG GAGATTTACG AGCAGCTCAT GAAGGCAGGT TGTAAACCTG ACCCGATCAC TTTCAGCGCC CTCATCATCG GGTTTTCAAA GGCCTCTGCA CTGGACAAGA TGGAAGCGGC CTTCAGTCAT ATGCAGGAGG AAGGATTCGC GATCAACGCC ATGATTGCTG AAATCATGGT GGAGTTTTAT GCTGCAGAGA GACACTTCGA GAAGATGGAA AGAATCATGA AGATTGTTGC CAATACTCCA GGCACGTCGT GCACCTCACG AATTTATGGC TTGGCCATCG AAGCCTATGC TCAGACACGT CGTATCGAAG AAATGGAACG AACTATTGAC GTTATGTTGG CCAGCAGGAG GCTCTTCACC ACTCCCAAGA CATTAGAGTC GGTGATCGAA GCCTATGGTG AGAAGTCCGA CTTTGAAGGG CTCGAGAAGA CCTTGACCCG GGTGAAGGGC TTGGGATGGA CCTATCAGCT GACCACTTTC CACACCTTAC TGCACGAGTA TGGGAAGGGC AGAATGTTTG ACAAGATGGA AGACGTCTTT GATGAGATGA AGAGAGCTGA AGACGCCCAA CCGACAGCGG AGACCTACCA AATTCTAGCA GACTCATATG ACAGCGCTGG TGAAGGAGAT ATGTTGATGA GGACGGTTGA GAGAATGCGT GAAGCTGGAT TCAACACTCA ACCAGTCACT GATAAAGAGG TCGACCGTGC ATGGACCGAC GACGAAATTT TCGGTGGAAA GAGACGGTGA CCAACAAGAG TTTTGATTCC TTTCTTGCTA CTCATCATCT TAGGCTGTTT AAGTCTTAGG CTCTCCCTAT ATTCCACTGG AATCACTTCA GGACAGCCAC TTTCTGACTT TTTTCTGCCC TCCACACGAG GCTTATTTCA AAAGCCTTTG CAGTGAAGGA GAGGCCGGCA CGTAGCACTT GCTGTTATCT GCATATTGTA GAGGGAAGAC GTAGGAATTC AAATTTTTAG CTTCATACGA TCAGAAATAT GATGATGTAG AAACTGTTTC TCGTCACATT CACTTTAATC TTGGTTGTGC GATCTATGTA AGAGTTTTTG GGCTTGTGGA CTGTAAGATG CGTTAGCCTC ATACTGAATG ACGAGTATGT GGTGTGTTTC TGTTTTATCA TTACTCGTAT TAGTTCATGG CCTAATTCTT GCTTGTAGTC ATGTACCGAG AAGTTGTAAT GCTGTGACC |
CDS |
| >Mp2g23220.1 ATGGTGAGGG GAGGCGGTCA GCTGCTGTCT TTGCTCAGGG CCGTGGGCGG CCAATGTGAC AAGCTGCGAA GCAGTAGCAG TTCGGGCCGC GGTCTCACAT CCGATCTTCA GTCTCGGACG AGGGCCTGGG GCGCGCCCGT CGTCGAAGGG GTTGCTGGAA GCAGAGGCAT TTGCCAGGAG CCGCAGATCG CCGCGCTGAG AGGGTCGGGG CTGAATTCTG CCCGTTTCTG CACGGTTGCC GAGTCCGGCG ATGTTGCGAC TCCTCCGGTG CCTGTTGTTG TCAAGGAGAA GTCGTATTAT GTTCCTGCAC GACACCCCGG AGCGCCAGAT CCCAAGCCCA GGAATGACAG GTTCTTTCGG GCGGGCAATA ATTCGACCGT GGCTCACATG GTCAGGTTGT TGGAAGCCGC TCCCAGCAAC GCCGATGTGG AGAAAATCCT GGATGACCGA ATTGCTGAGC TTACAGAGAC CAAGCGCTGG CCCTGGATGC CTCTTCTGGA TGCATTGCAA CGAGGACCCA AGCCGTATCT GGCCCTAGAG GTCTTCAACT GGAAGAAAGA CAAGTTTGAT GGAGGAGATC CAAAAGAGTA CGCGAAGATG ATTTCGACTG CGGGGAAGCT CAATCAACTC GACTTGGCTA CGACTCTGTT CAAGCAAATG GAGTTGAAAG GCGTGAAACG CATTCCTATC ACTTGTAATG CACTCATAAG CGCATATTCG AAGAACAACC AGGCCGACCA AGCCATTGCC CTGTTCAAAG AAATGCAAGA GACCGATGAC TGCAAACCTA CGCTTGTAAC TTACAATACC CTGATTGCGA TGTACAGCAA ATTGAGTGTA CAGGACATGG AACTTTACTT CGAGGCCTGT AAGGAAGCCG GTTTTTTCCC TGACAGACTT ACCTACAACT CGCTCATCTG GGGTTACATG AGGGCTGGTA TGTTCGACAA GATGGAGGAG ATTTACGAGC AGCTCATGAA GGCAGGTTGT AAACCTGACC CGATCACTTT CAGCGCCCTC ATCATCGGGT TTTCAAAGGC CTCTGCACTG GACAAGATGG AAGCGGCCTT CAGTCATATG CAGGAGGAAG GATTCGCGAT CAACGCCATG ATTGCTGAAA TCATGGTGGA GTTTTATGCT GCAGAGAGAC ACTTCGAGAA GATGGAAAGA ATCATGAAGA TTGTTGCCAA TACTCCAGGC ACGTCGTGCA CCTCACGAAT TTATGGCTTG GCCATCGAAG CCTATGCTCA GACACGTCGT ATCGAAGAAA TGGAACGAAC TATTGACGTT ATGTTGGCCA GCAGGAGGCT CTTCACCACT CCCAAGACAT TAGAGTCGGT GATCGAAGCC TATGGTGAGA AGTCCGACTT TGAAGGGCTC GAGAAGACCT TGACCCGGGT GAAGGGCTTG GGATGGACCT ATCAGCTGAC CACTTTCCAC ACCTTACTGC ACGAGTATGG GAAGGGCAGA ATGTTTGACA AGATGGAAGA CGTCTTTGAT GAGATGAAGA GAGCTGAAGA CGCCCAACCG ACAGCGGAGA CCTACCAAAT TCTAGCAGAC TCATATGACA GCGCTGGTGA AGGAGATATG TTGATGAGGA CGGTTGAGAG AATGCGTGAA GCTGGATTCA ACACTCAACC AGTCACTGAT AAAGAGGTCG ACCGTGCATG GACCGACGAC GAAATTTTCG GTGGAAAGAG ACGGTGA |
Protein |
| >Mp2g23220.1 MVRGGGQLLS LLRAVGGQCD KLRSSSSSGR GLTSDLQSRT RAWGAPVVEG VAGSRGICQE PQIAALRGSG LNSARFCTVA ESGDVATPPV PVVVKEKSYY VPARHPGAPD PKPRNDRFFR AGNNSTVAHM VRLLEAAPSN ADVEKILDDR IAELTETKRW PWMPLLDALQ RGPKPYLALE VFNWKKDKFD GGDPKEYAKM ISTAGKLNQL DLATTLFKQM ELKGVKRIPI TCNALISAYS KNNQADQAIA LFKEMQETDD CKPTLVTYNT LIAMYSKLSV QDMELYFEAC KEAGFFPDRL TYNSLIWGYM RAGMFDKMEE IYEQLMKAGC KPDPITFSAL IIGFSKASAL DKMEAAFSHM QEEGFAINAM IAEIMVEFYA AERHFEKMER IMKIVANTPG TSCTSRIYGL AIEAYAQTRR IEEMERTIDV MLASRRLFTT PKTLESVIEA YGEKSDFEGL EKTLTRVKGL GWTYQLTTFH TLLHEYGKGR MFDKMEDVFD EMKRAEDAQP TAETYQILAD SYDSAGEGDM LMRTVERMRE AGFNTQPVTD KEVDRAWTDD EIFGGKRR |