Mp2g25260
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF47113 | Histone-fold |
| Pfam | PF00808 | Histone-like transcription factor (CBF/NF-Y) and archaeal histone |
| Gene3D | G3DSA:1.10.20.10 | Histone, subunit A |
| PANTHER | PTHR10252 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| KOG | KOG1657 | CCAAT-binding factor, subunit C (HAP5); N-term missing; C-term missing; [K] |
| MapolyID | Mapoly0168s0007 | - |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0005634 | nucleus |
| GO | GO:0000976 | transcription cis-regulatory region binding |
| GO | GO:0046982 | protein heterodimerization activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCCAAT-NFYC3 | transcription factor, CCAAT-NFYC | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g25260 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g25260.1 CTATTTCAAC ATTTTCAATT TTTTTGCAAG CTGGTCGTAT CAAGAATGCA GATCAAGATC TGTGAGTTCA CACACTGGTC TTCTCAAAAT TTCAGGTTTT GACCGTGGAA ACTCTGAAGG CTACAAAGGA AAAGGGAGAA GAAGTGCAGA ACGCTGAAAT TAGTTTCGTG TACGTGTAGT CAGACTCGGC GCTGCTCCCG TCACGAAGTG GGATTTGCCC AGAGGATTCG GATTGCAGGC CTTTTCAAAT TTGTGCGTCA TGAATTGAGG AGCTCAGAAC TGAATCTGGG GATACTCATT TTGAGCTACC TACATAGTTT TGGTTGCATC ACAAGGATTC CAGAAGGTCA GTTGATATGA GCAGCAGCGA TGAGTCCGAT TCTGGGAGAA GATCATCGGA TGCAGAAGAG GATGAGAAAA TGGACGAGGA GAAAGAAGAA GTTGATTCTC AATCACAAGA TGACTCCCCA TCTCCGTCCC CTGTTCGGTC CCAGACGCAC TCGGCTCGGT CCAAGTCTGC CTCCCTCAAC GCCTTGGCTT TCCCCATTTC TAGAGTGAGG CGGTTGGTGA AGAGCGAGGG GGATATGCAG TGGGTCGGCG TTGAGGCCGG TTTTCTCATT GCGAAAGCAG CGGTAAGATT AAGATCGTTG ATTCTGAATT TTTTTAGTTG GCTTTTGTTT TCCATTCCTG ATCCTCTGAG AAAATTGCTG GCCATTCAAG TTCATTCAGA CCTGGACTTG ATATCAACAG CCTGCTGAAC TGCCTGACAT TTGAAAGCTT TCACGTAGTT ATTATGAACG AAGAATTAAA GCAAAATACT TCTTATCGTG CAATATATGA ATCGCAATTC AGAGATCACA CTCGGTATCT GTATTCGTTG CTGTCGAGTG TATAGAACAC GTCAAGACGT AAATGATTTA GCTCATAAGT TAGAGCAGCC GCTGAAATTG CCGAGCTCTG GAGAGAATGC AGTTTCTTGA AAGTCTTAGC CAGATTCGTT TCAGCCGCTG GAAATATTGG CCGTCATGGA AGCTTTGCCT TTCTGGAAGA GGAGAAATTT CATCCCATTC AACCTATTTG CGCAATTAGG AAATTGAGGG GTATCCTGCT GTTTTAGTGC TCTTTTTGCT TAATTTTGAG TTGGGAAGCA AGGCTCAACC GGGCATGGAC GTCATGTGCT CTTTGAAATC ATATACTTAC GACAATTTCA ATGCTGATGT TTATCTGAAT GGAAATTCCT GGACCGGAGT TTTTCCCAGA ATGAACAGTC AGGTCCAATG AAATTCCTTC ACCTTCTTTG ACTTGCCGCC CAAAAGAGCC GTGCGAATAG ACTGAGAAAG CTCTGTCAGT ACACTGAGCG TGGAATGATA AGACTCTGGT CACGGGAAAT TAATTGGGTA ATTTGTTTAT TTTTCATCCA CTCTACTTGA TCTTACAGGT TTTAATGTAT TCTGGATATA GGTTTTTGTT TTAAATTAAA CATAGATGGA TACAGTTAAT AAAAAATCAC TTCTATTTCT TTGGACTCTG AACCAACCTC AGGAGACGAA GCAGAAATTC ATATGCGGGG ACTGATCAAA ACAGTGCTAA TGTGCACATG AACCTGGCAA ATTTGTATGA TTTCGTATGA CATCATTCAA TTTTCTTCTT GGTAGCCTTT ATATGTTCAA TGCTCTCTCT TTAGTGAGGG TCTGATGGAT GGGGTCATCG TGACTATTCT GTCACTTAGA AAGGTGCACT GGAATTGCTT ACGGTCATGT TGTAGCAGAC TGCGTGCAAT TCATGAATGC TATCCATCAG GGCATCAATT TTTTTTGCTG CCTAGAAGTA GCTGTTACCC TTGAATCTTT GAGTCCTCCA AGGTTTCAGT CATGAGATGC CCATGTCTTT GTTCTGTTGC AGCTGTTTTT GGACACGAAA TATGTGATGT AGGACAGTCG TCGGTGCTCT GCTTAGAAGT TATGGCCACT CTGGTTTTGT TGCTGCTGAA TTTGGACAAC ATCACAGGAG CTTTTCTTGG AGAAATTTGT GGAGGAAGCT TTTGAAAAGA TGACAGAAGA GGACAGGACC ACCCTACACT ACAAAGATTT AGGTACTTCT TATGAATTGC TGTCTTAAAT TAAAAGTTAA AATTTTGATA GTTCAGTCTG GTGACTTAAC CTGGATGAAA GGTGATCTCA TCGTAAGACG AGACCACCTT GCATCTAGGT TCGTGAAGGA TGAGCTTTAA TTTGTTATTT AAATATCTTT AAGATCCAAG ATAGTCTGAT TTTGATGTTG TGTTTGTGGC GTTTTAATTT TCTGTTCGTG GACGGTTGAT AAACAAGAGT ATCCAATGAA GGTTTATTGA TATCTGAATC ACATAATGTA AATGCCACTC TTAGAGTGAT ACCAATCTTC AATACTGAAA TGATATGTAT TGATGGATTA TCTTTGCAGC CGAACATGTT ACTTGTGCGG AGAGAATGGA CTTTCTTGCA GGTTGGTGTT CCTCTCCTTC TTACCAGAGA TTATCAAGCT GTTGATGCGC ATGTTCACAT GTACCTTTTA CAGTGCTTCT GTAACCTTGT TCACTTCTTT CAAATATTGT AGCTCACAGT CATTGTGATT CGCAACGACG CGACCTGCGG GTCGGTCTCT TCACTCCTCG TGTTGTAGGA CAACAAACTT CTAACTATTA AATATTGCTG CAGATTTTGT TCCAGAGATG GTACTCGCGT CCACTGCAAC ATCAGCAAAA GCAATGGCTG ATAGATAGTC CACCTTATGA AAGAACAGTT TTGGAAGGCT TTCTCAGTAA GTCATTTTTC TAGATAAATT CCATCGGGAG CGCAATGATC AAGATTTTAC CTGAAGAGAA AACTACCATC ACTACTAGGA TAGGACTATT GAAAGTTCAT ATGCCTGTTG TAAATGTCAA TCCCACCTTT CTCACAATTT TGATACGGGC CTTGTAGAGA TAGCTGTGTG TATTCCTTAT CCTGAGGTCT TATCTGTGCA TACCTCAGAA TAAGGGTCTG CAGAGGTCAT AAGTTTCATG TTGAATAAGT ACATCTCACA GCTGACCTTT GGCCCCACCA CTAGGATTGC ATTCAATTGA TCCTTTGCTG GTGACACGGG ACTTTACTGG AAATTGACTC GATTCTCTTC GCAAAGTGGA ACCGTTTAAT CAGTTCTATG TGTGTCTCAA TCGAGCGAAC TTAACCAAAT ACATCTTTGC AGCAGGTTTT GCTGCAAACA TGT |
mRNA UTR + CDS |
| >Mp2g25260.1 CTATTTCAAC ATTTTCAATT TTTTTGCAAG CTGGTCGTAT CAAGAATGCA GATCAAGATC TGTGAGTTCA CACACTGGTC TTCTCAAAAT TTCAGGTTTT GACCGTGGAA ACTCTGAAGG CTACAAAGGA AAAGGGAGAA GAAGTGCAGA ACGCTGAAAT TAGTTTCGTG TACGTGTAGT CAGACTCGGC GCTGCTCCCG TCACGAAGTG GGATTTGCCC AGAGGATTCG GATTGCAGGC CTTTTCAAAT TTGTGCGTCA TGAATTGAGG AGCTCAGAAC TGAATCTGGG GATACTCATT TTGAGCTACC TACATAGTTT TGGTTGCATC ACAAGGATTC CAGAAGGTCA GTTGATATGA GCAGCAGCGA TGAGTCCGAT TCTGGGAGAA GATCATCGGA TGCAGAAGAG GATGAGAAAA TGGACGAGGA GAAAGAAGAA GTTGATTCTC AATCACAAGA TGACTCCCCA TCTCCGTCCC CTGTTCGGTC CCAGACGCAC TCGGCTCGGT CCAAGTCTGC CTCCCTCAAC GCCTTGGCTT TCCCCATTTC TAGAGTGAGG CGGTTGGTGA AGAGCGAGGG GGATATGCAG TGGGTCGGCG TTGAGGCCGG TTTTCTCATT GCGAAAGCAG CGGAGCTTTT CTTGGAGAAA TTTGTGGAGG AAGCTTTTGA AAAGATGACA GAAGAGGACA GGACCACCCT ACACTACAAA GATTTAGCCG AACATGTTAC TTGTGCGGAG AGAATGGACT TTCTTGCAGA TTTTGTTCCA GAGATGGTAC TCGCGTCCAC TGCAACATCA GCAAAAGCAA TGGCTGATAG ATAGTCCACC TTATGAAAGA ACAGTTTTGG AAGGCTTTCT CAGTAAGTCA TTTTTCTAGA TAAATTCCAT CGGGAGCGCA ATGATCAAGA TTTTACCTGA AGAGAAAACT ACCATCACTA CTAGGATAGG ACTATTGAAA GTTCATATGC CTGTTGTAAA TGTCAATCCC ACCTTTCTCA CAATTTTGAT ACGGGCCTTG TAGAGATAGC TGTGTGTATT CCTTATCCTG AGGTCTTATC TGTGCATACC TCAGAATAAG GGTCTGCAGA GGTCATAAGT TTCATGTTGA ATAAGTACAT CTCACAGCTG ACCTTTGGCC CCACCACTAG GATTGCATTC AATTGATCCT TTGCTGGTGA CACGGGACTT TACTGGAAAT TGACTCGATT CTCTTCGCAA AGTGGAACCG TTTAATCAGT TCTATGTGTG TCTCAATCGA GCGAACTTAA CCAAATACAT CTTTGCAGCA GGTTTTGCTG CAAACATGT |
CDS |
| >Mp2g25260.1 ATGAGCAGCA GCGATGAGTC CGATTCTGGG AGAAGATCAT CGGATGCAGA AGAGGATGAG AAAATGGACG AGGAGAAAGA AGAAGTTGAT TCTCAATCAC AAGATGACTC CCCATCTCCG TCCCCTGTTC GGTCCCAGAC GCACTCGGCT CGGTCCAAGT CTGCCTCCCT CAACGCCTTG GCTTTCCCCA TTTCTAGAGT GAGGCGGTTG GTGAAGAGCG AGGGGGATAT GCAGTGGGTC GGCGTTGAGG CCGGTTTTCT CATTGCGAAA GCAGCGGAGC TTTTCTTGGA GAAATTTGTG GAGGAAGCTT TTGAAAAGAT GACAGAAGAG GACAGGACCA CCCTACACTA CAAAGATTTA GCCGAACATG TTACTTGTGC GGAGAGAATG GACTTTCTTG CAGATTTTGT TCCAGAGATG GTACTCGCGT CCACTGCAAC ATCAGCAAAA GCAATGGCTG ATAGATAG |
Protein |
| >Mp2g25260.1 MSSSDESDSG RRSSDAEEDE KMDEEKEEVD SQSQDDSPSP SPVRSQTHSA RSKSASLNAL AFPISRVRRL VKSEGDMQWV GVEAGFLIAK AAELFLEKFV EEAFEKMTEE DRTTLHYKDL AEHVTCAERM DFLADFVPEM VLASTATSAK AMADR |