Mp2g25660
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| FunFam | G3DSA:1.10.10.60:FF:000061 | Trihelix transcription factor GT-2 |
| Gene3D | G3DSA:1.10.10.60 | - |
| PANTHER | PTHR21654 | FI21293P1 |
| Pfam | PF13837 | Myb/SANT-like DNA-binding domain |
| CDD | cd12203 | GT1 |
| Coils | Coil | Coil |
| ProSiteProfiles | PS50090 | Myb-like domain profile. |
| KOG | KOG4282 | Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; C-term missing; [K] |
| MapolyID | Mapoly0025s0112 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpTRIHELIX12 | transcription factor, Trihelix | Published |
Associated Literature (AI-based literature mining, Beta-version)
transcription factor, Trihelix (from nomenclature)
0 core 1 peripheral
Sakai Y, Takami H, Yamaoka S, Kato H, Fukaki H, Kohchi T, Ishizaki K. (2025)
· The New phytologist research experimental background
Downregulated DEG in MpSTG-induction transcriptome analysis.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g25660 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g25660.1 GGCTGGACAG GGACAGGGAC AGGGACTGGA GTGAGGGTGG ACTCATCTTC TCCGCTGCGC AAGGCGTTAA GCTCTCGACA GAAACACGCA GAGCTCGGAG GGAGGGAGGG AGAGGTCCAG AAGCAGGACA ACGAGCTCGA CCTTCGTCTC CCGTCGGCAT CCCCGCCCCA AGATTAGCTT AATCCCAACA GACAGATGTT GTGCGCGCCC GGCTCCACGC CATTTCTGAC CGACTCTCCA TTTAGTCTTC CGCCTGCTGC TGCTGCTCCT CTTCGTCGTC GTCCCTCTGC TGAGATCCGG AGGGCGGAAT AAAGCAGCAG GCAGCGCAGG CCAGCTTTCT CAGTCCCCTA GATTCTTCAT GGCGAGAGGC GCAGCAGCTG CAGCAGCAGA GCATCGGAGG CCAGCGAGCG ACGAGATGGC GTAGAGGAGG AGGAGGAGGA GGAGGAGGAA GAAGAAGAAG GAAGAGAGAG GGATTGAAAT GGTGGAGGAG TGCCGAGGAG GAGTGAGGAG GAGGAAGGAG TGAAGGCCGG GGAGGGATTT GGAGGCGAGG CAAGGGAGGG GAGGGATGAT GGAGGGGATG GGGAGCATGG ACGATTTTGC GCCGGACCTG GAGCTGGAGG ACGACGGGCT GTTCCGAGGG CGCATGAGCT TCAGGGATCT GCTGGAGGAG GCGGACGAGA AGGAGACGAA GCCTCCGCCA AGAAAGAAGA AGCGCGGCAG CAACAATGTG CAGAGCCTGC TGGAGGCGGT GATCGCGCGG CAGCAGAAGT TCTTCAGCGA CCTGCTCGAG TCCATCGAGC GCAAGGAGCA AATTCGCGAG CAGATTCGCC AGGAGAAGGA GGACAAGTGG AGGGCGGAGG AGCGCGCGCA GCTCGGCGTC TTCAACAATG CCATGCTCGT GCTCACGCAG GAGCTCGTCG GCGGCGATCG CGCCTCCAAC AACTCATCGG TGCTGCCGCT CGCGCTCACG GGCTCCGTCG TCGGCAGCCC TGAGGCCGGC TCCGTCGGGC CCAAGCGCCG CTCCAAGAAT TGGAAGAGCT CCGAGGTGCT GCAATTGATC AAGCTCCGCG GCGACATGGA GACCCGCTTC GCCAAATGCA CCAAGCGGGC CGGCCTCTGG GACGAGCTCG CCGAGGGTTT AGCGGCGCTC GGCGTCAAGC GCGATGGCAA GCAATGCCGC GAGAAATGGG ACAAGCTCAC GGCCGAGTAC AAGGACGTGG TGGACGGCAA GCGCGACCAG AACGAGAGCC CCTACTTCGC CGAGCTCACG GAGATCCTCG GTCGAGCCGC AGCGGCGGCG GCAGCAGCAG CAGCAGCCGT GGCTGCATCC GCACCCGACG AGGAGGCGGC CTAGGACGAT GCCCGTGGAT CGACATTGAT GACATTTTCG TCCACCCGAC ACCCAAAATG AGGCCGAGCG ACGAGCGGCA GAAATGGCCC TGAGCTCAAC CATTCATGCG AAATGAGCGA AGCGAATTGG GTCTTCGAGA GCCATCGAGA GCTTCTGCTT TCTGCGGCGA GGGAGAGAGA GAGAGAGGAT CATCGGCCCA CCGTGGGCCG AATTCGTACC AGGAGCGATC CGAGCAAGAA ATTTTTTCAT TCCTTCTTGA GCCGGAGCTG AGAGAAAATG TGTCTACGGG GGAGACGGTG GCCGAAGAAT CTGAAAGTTT TGCTATGGCG GACTCGGAAG AGGCGGAGAT GCGGTAATGC TGCTGCTGCC CGCTCGTAAT TGCTGGGGGG CTGCACTGCA CTGCGCGCCT TCTTCCCTCG TGTTTCCAAA TTCGGATTTG CTGTTTTGTG GACGAATGGC GATTTTGATG GGAAGAGTAT ATTTTTGTGA ATTCTTGCTC GTAGGCAGCA CTGTTCTTGT GGTCTGGCTG CAGCCGGAAT CGGTTGGCCG AGCCGGCTCC AGCGGAGAGA CATGGGACCA GACGCCGGAG GGCGAATGAG AGGAAGAGAG AATCGGTAGC CTGGGAACGG GACCTAAAGT CCCGCATTCC TTTCTGTGGA TCGTGCGCTG TCGTTTCACT CGGGAGCCTA GACACTGAGA GAGAGAGAGA GACAGAGAGC TTGTACTCGT AAAGCAGCTG CTGCTGCTGC TGCCTGCCAT AGCTCAGCTC AGCCACGCAG CCGAATGGCA GGAACTACAA ATGCCGGAGT AGGGAAAATA AGTCGTAGGG GCGGAAGGTG GGGCTCAGGG AGGCAGGCAG GCAGAGGCAG TGCGAGAGAG GAGAGAGGAG AGAGGATGCA TTTGAATTTG TCAAGGAATT TGAGTAGTGA AGACGGTGAA TCTACAGGAA TCTGCTGGCC CAAACGTGAC ATGGTAATCC TAC |
mRNA UTR + CDS |
| >Mp2g25660.1 GGCTGGACAG GGACAGGGAC AGGGACTGGA GTGAGGGTGG ACTCATCTTC TCCGCTGCGC AAGGCGTTAA GCTCTCGACA GAAACACGCA GAGCTCGGAG GGAGGGAGGG AGAGGTCCAG AAGCAGGACA ACGAGCTCGA CCTTCGTCTC CCGTCGGCAT CCCCGCCCCA AGATTAGCTT AATCCCAACA GACAGATGTT GTGCGCGCCC GGCTCCACGC CATTTCTGAC CGACTCTCCA TTTAGTCTTC CGCCTGCTGC TGCTGCTCCT CTTCGTCGTC GTCCCTCTGC TGAGATCCGG AGGGCGGAAT AAAGCAGCAG GCAGCGCAGG CCAGCTTTCT CAGTCCCCTA GATTCTTCAT GGCGAGAGGC GCAGCAGCTG CAGCAGCAGA GCATCGGAGG CCAGCGAGCG ACGAGATGGC GTAGAGGAGG AGGAGGAGGA GGAGGAGGAA GAAGAAGAAG GAAGAGAGAG GGATTGAAAT GGTGGAGGAG TGCCGAGGAG GAGTGAGGAG GAGGAAGGAG TGAAGGCCGG GGAGGGATTT GGAGGCGAGG CAAGGGAGGG GAGGGATGAT GGAGGGGATG GGGAGCATGG ACGATTTTGC GCCGGACCTG GAGCTGGAGG ACGACGGGCT GTTCCGAGGG CGCATGAGCT TCAGGGATCT GCTGGAGGAG GCGGACGAGA AGGAGACGAA GCCTCCGCCA AGAAAGAAGA AGCGCGGCAG CAACAATGTG CAGAGCCTGC TGGAGGCGGT GATCGCGCGG CAGCAGAAGT TCTTCAGCGA CCTGCTCGAG TCCATCGAGC GCAAGGAGCA AATTCGCGAG CAGATTCGCC AGGAGAAGGA GGACAAGTGG AGGGCGGAGG AGCGCGCGCA GCTCGGCGTC TTCAACAATG CCATGCTCGT GCTCACGCAG GAGCTCGTCG GCGGCGATCG CGCCTCCAAC AACTCATCGG TGCTGCCGCT CGCGCTCACG GGCTCCGTCG TCGGCAGCCC TGAGGCCGGC TCCGTCGGGC CCAAGCGCCG CTCCAAGAAT TGGAAGAGCT CCGAGGTGCT GCAATTGATC AAGCTCCGCG GCGACATGGA GACCCGCTTC GCCAAATGCA CCAAGCGGGC CGGCCTCTGG GACGAGCTCG CCGAGGGTTT AGCGGCGCTC GGCGTCAAGC GCGATGGCAA GCAATGCCGC GAGAAATGGG ACAAGCTCAC GGCCGAGTAC AAGGACGTGG TGGACGGCAA GCGCGACCAG AACGAGAGCC CCTACTTCGC CGAGCTCACG GAGATCCTCG GTCGAGCCGC AGCGGCGGCG GCAGCAGCAG CAGCAGCCGT GGCTGCATCC GCACCCGACG AGGAGGCGGC CTAGGACGAT GCCCGTGGAT CGACATTGAT GACATTTTCG TCCACCCGAC ACCCAAAATG AGGCCGAGCG ACGAGCGGCA GAAATGGCCC TGAGCTCAAC CATTCATGCG AAATGAGCGA AGCGAATTGG GTCTTCGAGA GCCATCGAGA GCTTCTGCTT TCTGCGGCGA GGGAGAGAGA GAGAGAGGAT CATCGGCCCA CCGTGGGCCG AATTCGTACC AGGAGCGATC CGAGCAAGAA ATTTTTTCAT TCCTTCTTGA GCCGGAGCTG AGAGAAAATG TGTCTACGGG GGAGACGGTG GCCGAAGAAT CTGAAAGTTT TGCTATGGCG GACTCGGAAG AGGCGGAGAT GCGGTAATGC TGCTGCTGCC CGCTCGTAAT TGCTGGGGGG CTGCACTGCA CTGCGCGCCT TCTTCCCTCG TGTTTCCAAA TTCGGATTTG CTGTTTTGTG GACGAATGGC GATTTTGATG GGAAGAGTAT ATTTTTGTGA ATTCTTGCTC GTAGGCAGCA CTGTTCTTGT GGTCTGGCTG CAGCCGGAAT CGGTTGGCCG AGCCGGCTCC AGCGGAGAGA CATGGGACCA GACGCCGGAG GGCGAATGAG AGGAAGAGAG AATCGGTAGC CTGGGAACGG GACCTAAAGT CCCGCATTCC TTTCTGTGGA TCGTGCGCTG TCGTTTCACT CGGGAGCCTA GACACTGAGA GAGAGAGAGA GACAGAGAGC TTGTACTCGT AAAGCAGCTG CTGCTGCTGC TGCCTGCCAT AGCTCAGCTC AGCCACGCAG CCGAATGGCA GGAACTACAA ATGCCGGAGT AGGGAAAATA AGTCGTAGGG GCGGAAGGTG GGGCTCAGGG AGGCAGGCAG GCAGAGGCAG TGCGAGAGAG GAGAGAGGAG AGAGGATGCA TTTGAATTTG TCAAGGAATT TGAGTAGTGA AGACGGTGAA TCTACAGGAA TCTGCTGGCC CAAACGTGAC ATGGTAATCC TAC |
CDS |
| >Mp2g25660.1 ATGGGGAGCA TGGACGATTT TGCGCCGGAC CTGGAGCTGG AGGACGACGG GCTGTTCCGA GGGCGCATGA GCTTCAGGGA TCTGCTGGAG GAGGCGGACG AGAAGGAGAC GAAGCCTCCG CCAAGAAAGA AGAAGCGCGG CAGCAACAAT GTGCAGAGCC TGCTGGAGGC GGTGATCGCG CGGCAGCAGA AGTTCTTCAG CGACCTGCTC GAGTCCATCG AGCGCAAGGA GCAAATTCGC GAGCAGATTC GCCAGGAGAA GGAGGACAAG TGGAGGGCGG AGGAGCGCGC GCAGCTCGGC GTCTTCAACA ATGCCATGCT CGTGCTCACG CAGGAGCTCG TCGGCGGCGA TCGCGCCTCC AACAACTCAT CGGTGCTGCC GCTCGCGCTC ACGGGCTCCG TCGTCGGCAG CCCTGAGGCC GGCTCCGTCG GGCCCAAGCG CCGCTCCAAG AATTGGAAGA GCTCCGAGGT GCTGCAATTG ATCAAGCTCC GCGGCGACAT GGAGACCCGC TTCGCCAAAT GCACCAAGCG GGCCGGCCTC TGGGACGAGC TCGCCGAGGG TTTAGCGGCG CTCGGCGTCA AGCGCGATGG CAAGCAATGC CGCGAGAAAT GGGACAAGCT CACGGCCGAG TACAAGGACG TGGTGGACGG CAAGCGCGAC CAGAACGAGA GCCCCTACTT CGCCGAGCTC ACGGAGATCC TCGGTCGAGC CGCAGCGGCG GCGGCAGCAG CAGCAGCAGC CGTGGCTGCA TCCGCACCCG ACGAGGAGGC GGCCTAG |
Protein |
| >Mp2g25660.1 MGSMDDFAPD LELEDDGLFR GRMSFRDLLE EADEKETKPP PRKKKRGSNN VQSLLEAVIA RQQKFFSDLL ESIERKEQIR EQIRQEKEDK WRAEERAQLG VFNNAMLVLT QELVGGDRAS NNSSVLPLAL TGSVVGSPEA GSVGPKRRSK NWKSSEVLQL IKLRGDMETR FAKCTKRAGL WDELAEGLAA LGVKRDGKQC REKWDKLTAE YKDVVDGKRD QNESPYFAEL TEILGRAAAA AAAAAAAVAA SAPDEEAA |